Gasterosteus aculeatus (three-spined stickleback): 120820064
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Entry
120820064 CDS
T07457
Symbol
vps53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120820064 (vps53)
Membrane trafficking [BR:
gat04131
]
Protein recycling
Others
EARP complex
120820064 (vps53)
Endosome - Golgi transport
Tethering complex
GARP complex
120820064 (vps53)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
GrpE
Laminin_II
Syndetin_C
FBF1
NBD94
COG5_N
Sec8_N
Motif
Other DBs
NCBI-GeneID:
120820064
NCBI-ProteinID:
XP_040033594
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All DBs
Position
I:7867747..7888644
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AA seq
830 aa
AA seq
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MMEEEELEFAEDLEAILHLTPEVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLAN
IDDVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQIAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRKRQYGEVANLLQG
VVNVLEHFHKYMGIPQIRQLSERVKAAQSELGTQILADFEESFPSQGSKRPGGPSNVLRD
ACLVANVLDPRIKQEIIKKFIRQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEE
KYGRMFPEEWCMTERIAVEFCHITRVELAKVMRTRAKEIEVKLLLFAIQRTTNFEGLLAK
RFTGCTLTDAPGQKKPESTLDSTNPFLDDEGGEDVGADKDDDLSKPRKPKAPDNPFHGIV
SKCFEPHLYVYIESQDKNLGELIDRFVADFRAQGPPKAGTEEGGAVLPSCADLFVYYKKC
MVQCSQLSTGEPMIALTTIFQKFLREYAWKILSGNLPKSNSNSGGLTISSLLKEKEGSEA
AKFTADELCLICSILSTAEYCLATTQQLEEKLKEKVDKLLVERINLTGEMDTFSTVISNS
IQLLVQDLDAACDPALSAMSKMPWQSVEHVGDQSPYVTSIIMHIKQNVPNIRDNLASTRK
YFTQFCIKFTNSFIPKFINHLFRCKPVSMVGAEQLLLDTHSLKTVLLDLPSIGSQVLRKA
PASYTKIVVKGMTRAEMILKVVMAPHEPPVVFVDNYIKLLADGNPETFQKILDMKGLKRS
EQSSMLELFRQRLPTPPSGADGGASLFSAPTPEQESSRIRRLEKLIKKRL
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaagaagaattggaatttgctgaggatttggaggctatattgcacctaacc
ccagaggtgcaactagccattgaacaggttttccccagccaggacccactggaccgagcg
gacttcaatgctgtagaatacatcaacaccctgttccccaccgagcagtctctggctaac
atcgatgacgtggtaaacaagattcggctgaagatccggcgcctggatgacaacatcaga
acggttgtgagaggccagaccaacgtgggccaggatggcagacaggctttggaggaggcc
cagatagccatccagcagctttttggtaaaatcaaagacatcaaggacaaggcggagaag
tctgaacaaatggtcaaggagattacgagggacatcaaacagctggaccacgccaagcgc
cacctgactacctccatcaccaccctcaaccacttgcatatgttggcagggggtgttgac
tccttagaagccatgaccagaaaaaggcagtacggtgaggtggccaaccttctgcaggga
gtggtcaatgtgcttgaacatttccacaagtacatgggcatcccccagatcagacagctt
tctgagcgagtaaaggcggctcagagtgagttggggacccagattctggcagattttgag
gaatctttcccctctcaaggctccaagagaccaggaggtcccagtaacgtgctcagagac
gcctgcttggtcgccaatgtgctggatccgcgcattaagcaggagattatcaagaaattc
atccggcaacacctctcagagtacctggtgttattccaggaaaaccaagatgtggcgtgg
ctggacaagatagatcgtcgctacgcctggatcaaacggcagctggtggactacgaggag
aagtacggacgcatgtttccagaggagtggtgcatgacggagcgtatagctgtcgagttc
tgccacatcaccagggtggagctggccaaagtaatgcgcacacgagccaaggagatcgag
gtgaagctgcttctgtttgccattcagaggactacgaacttcgagggtcttctggccaaa
cgtttcacaggatgcaccttgacggacgcacccggacagaagaagccagagagcactctg
gactccactaaccccttcctggacgatgagggaggtgaggacgtgggggcagataaggac
gacgatctgtctaagccaaggaagccaaaagctccagacaaccctttccacggcattgtc
tccaagtgctttgaacctcatctctacgtctacatcgaatcccaagacaagaacctggga
gaactgatcgaccgctttgtggctgacttccgagcacaaggtccacccaaggcaggcacg
gaggagggcggagcagtgctgcccagctgtgctgacctgtttgtttattacaagaagtgc
atggtgcagtgctcccaactgagcaccggagaaccgatgatcgctctcacaaccatcttc
cagaaattcttgagagagtacgcttggaagatcctctccggcaacctgcctaaatccaac
agtaacagcgggggtctcaccatcagcagtctgctgaaggagaaagaaggctcagaagct
gcaaagttcaccgcggacgagctctgcctgatctgtagcatcctcagcactgccgagtac
tgcctggccaccacacaacagttggaagagaaacttaaggaaaaagtagataaactccta
gtggaaagaattaatttgacgggggagatggacacattcagcactgtgatctcaaacagt
atccagctactcgttcaagatcttgatgccgcctgtgaccctgcactcagtgctatgagc
aagatgccgtggcagagcgtggagcatgtgggcgaccagagtccttacgtgacgtcaatc
atcatgcacattaagcaaaatgtgcccaacatcagagacaatctggcctccacacgcaaa
tacttcacacaattctgcatcaagttcacaaattctttcattcccaaatttatcaaccac
ttgttccgatgtaagcctgtcagcatggtgggcgctgaacaactgctcctcgacactcac
tcgctgaagacggtcttgctggatctgccctccatcggatcccaggtgctccgcaaggcg
cctgccagctacaccaaaatagtggtgaaaggcatgacccgtgcagagatgatccttaag
gtggtgatggccccacatgaaccgccggtggtgtttgttgataactacattaagctcctg
gccgatgggaaccctgagaccttccagaagattctggacatgaaaggtctgaagcgcagt
gaacagagcagcatgctggagctcttcaggcagaggctccccactccaccttcaggggcc
gacggcggggcctctctcttcagcgcccccacccccgaacaggagtcctctcgcatccgc
agactagagaaactcatcaagaagagactgtga
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