Gasterosteus aculeatus (three-spined stickleback): 120820148
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Entry
120820148 CDS
T07457
Symbol
rp1l1a
Name
(RefSeq) retinitis pigmentosa 1-like 1 protein
KO
K19538
retinitis pigmentosa 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gat03037
]
120820148 (rp1l1a)
04812 Cytoskeleton proteins [BR:
gat04812
]
120820148 (rp1l1a)
Cilium and associated proteins [BR:
gat03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
120820148 (rp1l1a)
Cytoskeleton proteins [BR:
gat04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
120820148 (rp1l1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCX
Motif
Other DBs
NCBI-GeneID:
120820148
NCBI-ProteinID:
XP_040033602
UniProt:
A0AAQ4QXE8
LinkDB
All DBs
Position
I:24499744..24513141
Genome browser
AA seq
2508 aa
AA seq
DB search
MHLVHAEMWDPRPPCKYASPLTPRTPSSRLTTASPAKRITFYKSGDSQFGGVRMAVHKRS
FKCFDALLDDLSQKVPLPFGVRTVTTPRGTHAVKHLEQLQDGGCYLCSDRRQTKPVNMEL
AGKRPSGWYHHGRGPQRPESSSGTPPGHSSHRQRRILLVKNSEPGVRRSLVLNRRSTRSL
RAFLDEASEVMQFHIRKLYTAEGRRIDSVQSLTTCPGVLVCVGREAFSPVLVNFIRKSSE
EKLPGLGPRTPGNGARSPAAQGLRSPPHGAQSSEFSEGPESKKNVNFGLETKKSIIHPRS
DSSNRSARFSLSSEKSYGHGVNAYSHGRPAIMNDDIEKRVLVNKDGSLSVEMRVRFRLQS
DETLQWSTQVKKSPSVTNECCPTSQAEADYLQQGQSESCSDPDCASFHPEGVDYSNQPPQ
RVLEGNICHCCYQRPKQQYDLWENPAHSHRKAPVPPPHASSRTHTVRRHTHSSSSSSSCN
SRRVVRCRARVSSCTGGPEQSQLVQEEMFVTEHVESRVEQDEETHVEVCRVSRCCSRTEV
VADLRPLSRKSVEDEVMMEEEGERSPSVISCSSHILQSLKGDQDDDLPASASQCCHGNKP
SPSPTRQGDEPTSNVSVGSVHSKEQKGCDEETGSRAVSAASFCHCGAADEHSTADAAEND
RAPSSMSKTSRASCRSSTAAITEDKRAADEEEEEGNRVVSSLSGHTALSLQSRASSVCPN
CGGCKPNSDADSRASQKSHHSKQASPKPSKPLPGQTDTSNGSDNDDDDGSEGSAGSTQSN
KSNLTQNGRCSATPSGLTGSARGATSRTSNPEGAGAEEVRTPSASSPTSQRSNRSHKSVC
EDGGAAEREGRSPSAVSAVSNKSTKSHKSHSSATAGIEPREEAKGDNTVERTQSSLSAKS
GASAKSSASAKIRTKVASPINIAAVEEDDKRTHSALSDKPGRQERPDSVLSAKSAKSNAL
ATIGASQSAACSHCAREVSPADEPEATGHDEEIEAEERAVSAMSAKSNMSVKSNKSHKFT
KAPERPLSPRCGTGADGEGRAASQVSGRSVNGRSSLMVEDGQQRSESVISAKSASSAKSR
RTNSPAKDEAKTESRTPSAISGKSHISAKSSKSQKSNPTTASPNLNDAGIPSAEMNGDTQ
GNENGRVASVLSVKSEASARSRTSHKSERNLKPSTPIANVTIKTPDGVDEEGNEETERPQ
SAASVKSTVSTSSRKSQHKAPAETGDENFVEEDLPSKSQGREPSPRSACSSPTRSPKAAS
PVQHLLPGETRGPSALSVPSTVSAKSCKLKCNCGAASAKDERQREKKKSNEELDNEEASD
RAPSILSSSTRRSRRESGGTEQTLSRNSSGSVSLGLPEDQDTADSDSGKSSVSFHTNVER
KSKVMTATPLVPKSTEQSSLKEEREETPHNHRAVDIPTIETPGGSQHKGKEDGEQITERG
ASAFSAKSSRSNKSSCNCGVKAPTEAGNYLETASVKSGSSSSNAGAIDDRRSLARAKVRS
KSPSSASAKNASVRSKGDDSGKGHKAKSSASVRTSSSQKKEIKSLSPVHSNRIGGSKVET
HTESTLSHSLSAADMLKETMAAVRPHSQQSKASKTSGKSVVRKGARSRNEADQEDRELSP
ACLPNASPNEVVSEWLRSIPANSSMLSLGDEPNEEDAEENPKEGEGEEMKEAPVEVEEQG
KEEAEEGEEKEEEVGCGGAEEKQSSGVAPHDSVSSRPKTLLLNDDALPRSSRSSAAVMKI
LLRSSLSRCQSMPEVSPVYGRKLSSSARCLLDCLAQLQVIDPSLSPGFDPKKDQKYEDFM
VILQSLWLTEPRNTETEAAKVPGTEQVSPPRSSSGLGMSLGSGGSGKEKENGNPQSKTNG
AEKVVEGGTPDVTEGPAEEQSSLPPGLDGAKAAESPSSSDKSSANGCCKSPTDNERETPD
DTSSTAPSTILRAPMSKRKSHDPDPEWVLKLLKKLEKQFMDHYVNAMAEFKVRWDLDDNL
VLDAMIGELKDEVSRRIQSSVESEVRKIQSRAGRGGRLPRPPQRGNLSKESTMTENRRRI
LKVIKNQSRKTAESLSDGETTGDCSDQRSEDEYCPCDACVLKKMAARPVRENPLAAEAPV
MMEFDLRKILQLKKTPAPAAVSVQPTEGGGDGKVSVEEGRSLEVLQEVEEEDEEDVTKED
IKACVVLEETIPEEEEEMGEEEDKAVEEVEAEREESSAGEEQEEEGGEEAGEEETSENGE
EEEAECKCQSARNKEEEEETAEGEDAEETSGNTGEAETGDEGEDEGEEPEEGETGTGEEE
SDMDTVKEAAAGEDVGEEEAERDECEVSDFKEDTEETSGRDSLGEEASGETEEDNAAKRE
ESTLVEEFGEGNVSSSAGDEEEGDDGVGEGESDGDKTRGESEEHGGEASEEERTSLQGRA
PSATEGEEADGEDSDGKRPSNASVEEGEGRESTIKGDGSALLHQYTRTSVESQPGSLEDV
DAEARRPAVDSMAVPKATGGGSGQRRSRSPGRVQRRKPKEADGEQEDF
NT seq
7527 nt
NT seq
+upstream
nt +downstream
nt
atgcacttggtccacgcagagatgtgggacccccggcccccgtgtaaatatgcctcgcct
ctcaccccgcggaccccctccagccgtctgaccacagccagtccggccaagcggatcacc
ttctacaaaagcggcgacagccagttcgggggcgtcaggatggccgtccacaagcgcagc
ttcaaatgcttcgacgccctgctggacgacctttcccaaaaggtgcccctgccattcggc
gtgcggacagtgaccacccccagagggacccacgccgtcaaacacctggagcagctgcag
gacggcggctgctacctctgctctgaccggcggcagaccaagccagtcaacatggagctg
gccggcaagcgtccgagcggctggtaccaccacggccgcgggccccagcggcccgagtcc
tcgtccggcacgccgcccggccactcctctcaccggcagcggcggatcctgctggtgaag
aacagcgagccgggcgtgaggaggagcctggtgctcaacaggaggtccaccaggagcctg
agggcctttctcgacgaggcatcagaggtgatgcagtttcacattcgcaagctctacact
gccgagggacgcaggattgacagcgtgcaaagcctcacgacctgtcctggtgtgttggtg
tgtgtcggccgggaagccttcagcccggtgctggtgaacttcatcaggaagagctcagag
gaaaaactgcccggtctcggccccaggactccaggtaacggggccagatctcctgctgct
cagggattgagatctccacctcacggagctcagtccagcgagttcagcgaagggccggag
agcaagaagaatgtaaactttggtctggaaaccaaaaaaagcatcatccatcctcgctcc
gattcctccaaccgctcagcccgtttctccttgtcttcggagaagtcgtacggccatggg
gtcaacgcctactcccacggcagaccggccattatgaacgacgacattgaaaagcgggtc
ctggtcaataaagacggaagcctctcagtggagatgagggtacgttttcgcctacaaagt
gacgagaccctccagtggtccacgcaggtaaaaaaatcaccatcagtgaccaatgaatgt
tgcccaacaagccaagcggaggccgattacctgcagcagggccaatcagaaagctgctcg
gaccccgattgtgcatccttccaccctgaaggcgtggactattccaaccaacctccgcaa
cgagtgttggaggggaacatctgccactgctgttaccagaggcctaaacagcagtatgac
ctgtgggaaaacccggcgcatagccacaggaaggcccctgtccctcccccgcacgcctcc
agccgcacccacaccgtgaggagacacacgcactcgtccagctcttcctcgtcgtgcaac
tccaggagggtggtgcgctgtcgggcacgggtctccagctgcacgggaggtccggagcag
agccaactggtgcaggaggagatgttcgtgacggagcacgtggagagcagagtggagcag
gatgaagaaacccacgtcgaggtctgcagggtgagccgatgctgcagcagaactgaagtg
gtcgccgacttacgaccgctgagcaggaagtcggtggaggatgaggtaatgatggaggaa
gagggggagcgttcaccgtctgtcatcagctgctcctcgcacatcctccaatcgctgaaa
ggagaccaggatgacgacctgccagccagcgcttcacagtgctgccacggcaacaaacca
tctccgtctccgactcgccagggtgacgaaccaaccagcaacgtctcggtaggttccgtc
cactctaaagaacaaaagggttgcgatgaggagacaggaagccgagccgtatctgcagcc
tctttctgtcactgcggagcagctgacgagcattcaacagccgacgcggcggagaatgat
cgagctccaagctccatgtccaaaacgagcagagcctcttgcaggtccagcacagccgcg
atcacagaggacaaaagggccgcagatgaggaggaggaagagggaaaccgggtggtcagt
agcttgtctggtcacacagcactttctctgcagtcaagggcatccagtgtatgtcctaat
tgtggcggctgcaaacccaactctgatgctgacagtagggcatcacagaagtcccatcat
tccaagcaagcttctccaaagccctcaaaaccgctccccggccaaacagatacaagtaat
ggcagcgacaatgatgatgatgatggctccgaaggttcagctgggtcaacgcaatccaac
aagagcaacctcacccagaacgggcgctgctctgcgacaccaagcggcctgacgggcagc
gcacgcggtgccacttccagaacgtccaatccggaaggagcaggagcagaggaagtgagg
actcccagtgcttcctcacccacaagtcaaaggtccaataggtcgcacaagtctgtctgt
gaagacggtggtgctgcggagcgagaggggagaagccccagtgccgtgtcagctgtttcc
aacaagtccaccaagtctcacaagtcgcacagcagcgcaacagctggcatagagccaaga
gaggaagcaaagggagataacactgtggagagaacgcagagctccttgtcagccaaatct
ggtgcttcggcaaagagcagtgcttcagccaagataagaacaaaggtcgcctccccaatc
aacattgcagctgtggaggaggatgacaaaagaactcatagtgccctttctgataagccg
gggcgccaggaaagacccgacagcgtcctatccgctaagtcagctaagtcaaatgcgttg
gcaaccatcggggcgtctcagagcgccgcttgcagtcactgtgcgagagaagtttctcca
gctgatgaacctgaagcaactggacatgacgaagaaattgaggcggaggagcgagcagtg
agcgccatgtcagccaaatcaaatatgtctgtgaagtccaataaatctcataagttcacg
aaagctccagaaagaccactttctcccaggtgtggaaccggagctgacggagaaggaagg
gcagcgagtcaagtgtctggcagatcggtcaatggccggtcttctctgatggtagaagat
gggcagcagaggtctgaaagtgtaatatctgctaaatcagcctcctcagcgaagtcccgc
cgcacaaattctccagccaaagacgaggcaaagacagagagcagaacccctagcgccata
tcggggaaatcccacatctctgcaaagtcctccaagtcacagaagtccaacccaaccaca
gcatctccaaatctaaatgatgctggtattccttctgctgagatgaatggagatacacag
ggaaatgaaaatggccgggtggccagcgtcctctctgtgaagtcggaagcatcagcgagg
tcccgtacttctcacaagtctgaaaggaatctgaaaccgtcgacaccaattgcgaatgtc
acgattaaaactcctgatggggttgatgaggaaggaaatgaggaaacagagaggccacag
agtgctgcatctgttaaatctaccgtttcgacttcatcgcgtaagtcccagcacaaggca
cctgctgaaacgggagatgaaaattttgtggaagaagacctacctagtaagtctcagggc
cgagagccctcacccaggagtgcatgttcctcaccgacccgctcacctaaagctgcatct
ccagtgcaacacctgttgcctggagagacgagaggtcccagtgccttgtcagttccctcc
accgtttctgcaaagtcttgcaaattgaaatgcaactgtggagcagcttcagcaaaagat
gaaaggcagagggagaaaaagaaatctaacgaggaactggacaacgaggaggcttcagat
cgggctcccagcatcctgtcgtcctcgaccaggagatcgaggagagaatcgggaggcacc
gagcagacactgagtcgaaactcttcagggtcagtctctctcgggttgccagaagaccaa
gacactgctgactcagacagtgggaagtccagtgtttcttttcacacaaacgttgagagg
aagagcaaagtgatgacagctactcctctcgtccccaaaagcactgagcaatcttctttg
aaggaggaaagggaggaaaccccccacaatcaccgagcagtcgatatcccgacgattgaa
acaccaggagggagtcagcacaaaggcaaagaggatggcgagcaaataacagaaagagga
gcaagtgcgttttcagccaaaagcagcaggtctaacaagtcttcatgtaactgtggagtc
aaagcaccaaccgaagcaggaaattatctagaaaccgcaagtgtgaagtctggttcatcg
tccagcaatgcaggtgcgattgacgacaggaggtcattggcgcgcgctaaagttcggagc
aaatctccatcaagtgccagtgctaaaaatgcatcggtgaggagcaaaggagatgattca
ggaaaaggtcacaaggccaaatccagtgccagtgtcagaacatccagttctcaaaagaaa
gaaatcaaatccttgagccctgtccacagcaacagaatcggcggcagcaaagtggagaca
cacaccgagagcaccctgtctcactcgctgtccgccgccgacatgctgaaggaaaccatg
gccgccgtacggccgcacagccagcagtcgaaggccagtaaaaccagcgggaagtctgtg
gttagaaagggggcgaggagcagaaacgaggcggatcaggaggatcgggagctgtcgccc
gcctgcctgcccaacgcctccccgaacgaggtggtcagcgaatggctgcgcagcattccg
gccaacagcagcatgctgtcgcttggcgacgagccgaacgaagaggatgcagaagagaac
cctaaagagggggaaggagaggagatgaaggaggctcccgttgaggttgaggagcagggg
aaagaggaggccgaagagggggaggagaaagaggaagaagttggatgcggtggcgccgag
gagaagcaaagctcaggtgtggctccgcatgattcagtgtcatcacgccccaaaaccctg
ctgctgaacgacgacgctctgccaaggagctcgcgttcctcggccgcagtgatgaaaatt
ctcctgaggtcctctctgagtcgatgtcagagcatgccggaggtgtctccggtttatggg
cgtaaactgagctcgtcagccagatgtctcttggactgtttggctcagctccaagtcatt
gacccgtcattgagccctggctttgacccaaagaaggaccagaaatacgaggatttcatg
gtcatccttcagtccctgtggctaaccgaacccaggaacaccgagacggaggcggccaaa
gtccccggcacagagcaggtgtctccgcccaggtcttcgtccgggttgggcatgagcctt
ggctctggcgggtcggggaaggagaaggagaatggaaacccacaaagcaaaacaaacggg
gcggagaaggttgtcgaaggggggacaccagacgtgacagaggggccggcggaagaacaa
agctcactccctccgggtctggacggcgccaaagccgccgagagtccatcgtcgtcggat
aagagctccgccaacggttgctgcaaatcccccactgacaacgagcgggagacgccggac
gacaccagctcgaccgcgccctccaccatcctgcgggcgcccatgtcaaagagaaaatcc
cacgaccccgacccggagtgggtcctgaaactcctgaagaagctggagaagcagttcatg
gaccactacgtcaacgccatggcggagttcaaagtccgctgggacctggacgacaacctg
gtcctggacgcaatgatcggcgagctgaaggacgaggtgagccgacgcatccagagcagc
gtcgagtccgaggtgaggaagattcagagtcgcgccggcaggggggggaggttgccccgg
ccgccacagagagggaacctctccaaggagtctaccatgacggagaacaggcgtcggata
ttgaaggtcataaagaaccagtcacgaaaaaccgccgagtctctgagcgacggcgagacg
acgggcgactgcagcgaccagcggagcgaggacgagtactgcccctgcgacgcttgtgtc
ctcaagaaaatggccgcccggccggtcagggagaacccgctggcggccgaagcaccagtg
atgatggagtttgacctccgtaagatactgcagctgaagaaaacccctgcgcccgcagct
gtgtctgtgcaacccactgaggggggaggtgacggcaaggtgtcagtagaggaggggagg
agcttagaggtactgcaggaggtagaggaggaggacgaggaggatgtaactaaagaggat
atcaaagcttgtgttgttttagaggagacgatcccggaggaagaggaggaaatgggggaa
gaagaggacaaggctgtcgaggaggtagaagctgaaagggaggaaagtagtgcaggtgag
gagcaggaagaagaaggtggtgaggaggcaggagaggaggagacatcagaaaatggtgag
gaagaggaggcggaatgcaagtgccagtctgcgagaaataaagaggaagaggaggaaaca
gccgaaggagaagatgccgaggagactagcggcaacacaggtgaggctgagacaggtgat
gagggggaggatgagggggaggagccggaggagggggagaccggaacaggggaagaggag
agtgacatggacacggtaaaagaggcagcagccggggaagacgtcggggaggaggaggct
gagagggacgagtgtgaggtgtctgattttaaggaggacacagaggagacgtcaggcagg
gacagcttaggggaggaggcgtctggcgaaacggaggaagacaatgctgcaaagagagaa
gagtccacactggtggaggagtttggggagggaaacgtcagctcctcggcaggagatgaa
gaggagggcgatgatggggtcggagagggggagtccgatggagacaaaacgaggggagag
agtgaagaacacggaggagaagcatctgaggaggaaagaacctcattacagggccgggcc
ccgtctgcgaccgagggagaggaggccgacggcgaggactccgacgggaaacgcccgagc
aacgccagcgtcgaagaaggagaaggccgagagtcgaccattaagggggacggcagcgct
ctcctccatcagtacaccaggacctctgtggagtcccagcccggctccctggaggacgtc
gacgcagaggcgcgccgtcccgccgtggactccatggcggtgcccaaagccaccggcggg
gggtcgggtcagaggaggagccgctcaccgggcagggtccaacgccgcaaacccaaagag
gccgacggcgaacaggaggacttttaa
DBGET
integrated database retrieval system
