Gasterosteus aculeatus (three-spined stickleback): 120820209
Help
Entry
120820209 CDS
T07457
Symbol
ppifa
Name
(RefSeq) peptidylprolyl isomerase Fa isoform X1
KO
K09565
peptidyl-prolyl isomerase F (cyclophilin D) [EC:
5.2.1.8
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
120820209 (ppifa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
gat03110
]
120820209 (ppifa)
Enzymes [BR:
gat01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
120820209 (ppifa)
Chaperones and folding catalysts [BR:
gat03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
120820209 (ppifa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Motif
Other DBs
NCBI-GeneID:
120820209
NCBI-ProteinID:
XP_040033663
LinkDB
All DBs
Position
VI:11561229..11563751
Genome browser
AA seq
229 aa
AA seq
DB search
MLQVRYRLRYSKPGVLAATLFSSSPAKNPVVFLDVAADSEPLGRITIELNADVVPKTAAN
FRALCTGEPGFGFKGSVFHRVIPEFMCQVRCTVKMVHGKAGPHFMYLPCGLLLCFRFQGG
DFTKHNGTGGKSIYGKTFRDENFILKHTGPGTLSMANSGPNTNGSQFFICTAKTEWLDGK
HVVFGQVTEGMNVVTKMESFGLHDGGVTKNIVITDCGEIPREHTRTSVE
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgttacaagtgcggtaccgcctgagatacagcaagccgggcgtcctcgccgcgacgctc
ttctcctccagtcccgccaagaaccccgtcgtgttcctggacgtcgctgcggacagcgag
cccctcgggaggataaccattgagttgaatgcagatgtggtgccaaagactgcagctaac
ttcagagcactgtgcacgggggaacctggcttcgggttcaaaggctccgtgttccacagg
gtcataccggagttcatgtgtcaggtaaggtgcacggtaaagatggtgcacggtaaagct
gggccacatttcatgtatttgccatgtggtctgttgttgtgtttccggtttcagggggga
gatttcaccaaacacaacgggacaggagggaaatctatatacgggaagaccttcagagat
gaaaacttcatattaaagcacactggtccaggaacactttcaatggcaaattcagggcca
aacaccaacggctcccagttcttcatctgcacggctaaaacagaatggcttgatggtaaa
cacgtggtgtttgggcaggtgacggagggtatgaacgtggtcaccaagatggaatccttt
ggtttacatgacggcggtgtgactaagaacattgtcatcaccgactgtggggagatcccc
cgagagcatacaaggacttctgttgaatga
DBGET
integrated database retrieval system
