Gasterosteus aculeatus (three-spined stickleback): 120820235
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Entry
120820235 CDS
T07457
Symbol
pkd2l1
Name
(RefSeq) polycystic kidney disease 2-like 1 protein
KO
K04990
polycystin 2L1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gat03037
]
120820235 (pkd2l1)
04040 Ion channels [BR:
gat04040
]
120820235 (pkd2l1)
Cilium and associated proteins [BR:
gat03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
120820235 (pkd2l1)
Ion channels [BR:
gat04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120820235 (pkd2l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
MCM_C
EF-hand_7
SIKE
Aida_N
Motif
Other DBs
NCBI-GeneID:
120820235
NCBI-ProteinID:
XP_040033702
UniProt:
A0AAQ4QL66
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Position
VI:3579455..3585292
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AA seq
807 aa
AA seq
DB search
MKRLDNRADSHLAPQVESDSMGNGAWVNHGYSGSPVPSPQGISTIYSSQPLFQGAVDSMY
KLDTADPFPEEPPSADPSPMKKKRGCCSFIKGFWGTTMTENTSNNRELFVRTTLRELVVY
LVFLVDICLLTYGMTSSSTYYYTKAMTDLFVNTGGESGVSFQSIGTMADFWTYAQGPLLD
GLYWTKWYNNQSLNRGEQSFIYYENMLLGVPRMRQIKIMNNSCNVHKDFKDEITGCFDVY
NDKKEDGLSFGLINGTAWTYHTEKEVKGSSHWGLLTTYSGAGYYQDLSRTKDESAIILGE
LVDNLWLDRGTRAAFLDFSAYNANINMFCVIRLVVEFPATGGAIPSYQIRTVKLIRYINY
WDYFVLGCEVVFCIFILYYVVEEILELRIHKLSYFNSIWNILDIVVIMLAIVAIIFNIFR
TVKVDNLLGKLLEQPGIYADFEFLAFWQTQYNNMNAVNLFFAWIKVFKYISFNKTMTQLS
STLGRCAKDILGFAIMFFIVFFAYAQLGYLLFGTEVESFSTFVKCIFTQFRIILGDFDYD
AIDRANRVLGPIYFVTYVFFVFFVLLNMFLAIINDTYSEVKEELSCQKDELQITDIIKQS
YMKTFTKLKLRREKISDVQKALQSGSGEIEFKDFRETLKEMGHADHEISAAFSRFDHDGN
QILDKGEQERMNIELEEKRDALCAELNHLGSHYGKDLMEKPAVTSNEQKHSSHMFVDQEQ
FQRLARQVLQLDSSVVGIQSNIELIMEKLRLQEERKGSAKKLTVTDNDRDDTASDGSVLV
CVDRGTKAETLSWRTADRTGAAYDYRM
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcctggacaaccgggccgacagccacctggccccgcaggtggagtcggacagc
atgggcaacggagcttgggtgaaccacggctactcagggtcccctgtgccttcgccccaa
gggatcagcaccatctacagctcccagcccctcttccagggcgccgtggacagcatgtac
aaactggacacggccgatccgttcccggaggagccaccatccgctgacccaagcccgatg
aagaaaaaacggggctgctgctctttcatcaaaggcttctggggaacaactatgaccgaa
aacacctcaaacaacagagaattgtttgtccgaaccactctacgtgagttggtggtctat
ctggtgttcctggtggatatttgcctcttgacatacggcatgaccagctccagcacctat
tactacactaaagccatgacggacctgtttgtgaacacgggtggcgaaagtggggttagc
tttcagtccattggcaccatggccgacttctggacttatgctcagggcccgttgctggac
ggcctctactggactaaatggtacaataaccagtccctgaacagaggggaacagtccttc
atctactatgagaacatgctgctgggagtgcccagaatgaggcagatcaagatcatgaac
aactcctgcaacgttcacaaggacttcaaagatgagatcacgggatgcttcgatgtttac
aacgacaagaaggaggatggccttagcttcggtctgattaacggcactgcctggacctac
cacacagagaaagaagtcaaaggttcgtctcactggggcctgctgaccacgtacagcgga
gcggggtactaccaagacctgagtcgcaccaaagacgagagcgccatcatactgggggaa
ctggtggacaacctgtggctcgaccgaggaaccagagcagccttcttggacttctcagcg
tacaacgcaaacatcaacatgttctgtgtcatcaggttggtggttgaatttccggcaact
ggtggagcaatcccttcctaccagatcagaaccgtcaaactcattcgctacatcaactac
tgggattactttgtcctcggctgcgaggtggttttctgtatattcatcctctactatgtc
gtggaagagatcctagagctgcgaatacacaagctctcttatttcaatagcatctggaac
atactggatattgttgtcataatgcttgccatcgttgccattatcttcaatatttttcga
accgtcaaagtggataacttacttggcaaactgctggaacaacctggtatctacgctgat
tttgagtttctggccttctggcaaacacagtacaacaacatgaatgcagtgaacttgttc
tttgcgtggatcaaggttttcaagtacatcagttttaacaagaccatgactcagctatcc
tccacactgggtcgatgtgccaaggatatcctgggcttcgccatcatgttcttcatagtg
ttcttcgcctacgctcagcttggatatttgcttttcgggacagaggttgaatctttcagc
acctttgttaagtgcatcttcacacagttcaggattattctcggagactttgattacgat
gcaattgaccgagctaacagagtacttgggccaatctactttgttacctatgtgttcttt
gttttctttgttttactgaacatgtttctggccatcataaatgacacatactctgaagtt
aaggaggagctctcttgccaaaaagatgagctacagattactgacatcatcaagcagagc
tacatgaagacttttacgaagttgaaacttagaagggagaaaatatcagatgttcagaag
gcgctacaatctggatctggagaaatcgaattcaaggacttcagagaaactctgaaagag
atgggacatgctgatcatgaaatctctgcagccttttcccggtttgaccatgatgggaac
cagattctagacaaaggcgaacaagagaggatgaatatcgagctggaggaaaagagggac
gctctttgcgctgagctcaaccatctcggaagccattatgggaaagatttaatggagaag
cctgctgtaacgtccaatgagcagaagcactccagtcatatgtttgtggatcaggaacag
tttcaaagactggccagacaggttctccagctcgacagctcggtggtaggcatccaatcc
aacattgagttgattatggagaaactgagattgcaagaggaaaggaagggatcagcaaag
aaactcactgtgaccgacaacgatagggatgatactgcctcagatgggagcgtcctggtt
tgtgtggacagagggacgaaggctgagactttgtcctggagaacagcagatcgcaccggc
gccgcatacgattaccgaatgtga
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