Gasterosteus aculeatus (three-spined stickleback): 120820249
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Entry
120820249 CDS
T07457
Symbol
pdlim1
Name
(RefSeq) PDZ and LIM domain protein 1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120820249 (pdlim1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gat04990
]
120820249 (pdlim1)
Domain-containing proteins not elsewhere classified [BR:
gat04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
120820249 (pdlim1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
120820249
NCBI-ProteinID:
XP_040033720
UniProt:
G3NFZ8
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Position
VI:complement(3693055..3699181)
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AA seq
322 aa
AA seq
DB search
MPLRVVMPGPGPWGFRLVGGKDFEQPLTISRVTPASKAAQANLCIGDMILAIGGEPTEGM
THLEAQNKIKGCIEEMVLSVDRSESKMWSPLSSEEGRTHPYKMNLASEPKEVRHIGSTHN
RSALPFAGFGSKVVTNQYNSPSALYSSENIKDFNSAVDEVQTLAAANEPHSKAPSDLPQT
GKRPPVAADSEVYKMLQENQESVEPPRQSASFKVLQEILETGDPDKPSGFRSVKPPATKI
GSSVGNTEKLPSCDKCGSGIVGMVVKLRDKFRHPECYTCTDCNVNLKQKGHFFVEEQIYC
EKHARERVTPPEGYDVVTVYPK
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgcctctccgggttgtaatgccgggtcccgggccctggggcttcaggctggtcggggga
aaggacttcgagcagccgctgactatttcccgggtgaccccggcgagtaaagccgctcag
gccaacctgtgcatcggcgacatgatcctggccatcggcggcgagccgacggagggcatg
actcacttggaggcgcagaacaagatcaaggggtgcatagaggagatggtgctctctgta
gacaggtcagaaagtaaaatgtggtccccgctttcgtccgaggaagggaggacacatccg
tacaagatgaatctggcatccgagccaaaggaggtgaggcacatcggctccacccacaac
cgcagcgcgctgccgttcgccggcttcggctccaaggtggtgaccaaccagtacaacagc
ccctccgcgctgtactcctcagagaacatcaaggacttcaactcggccgtggacgaagtc
cagaccctcgctgctgccaacgagccccacagcaaagctccgtcagatcttcctcagacg
ggcaagcggccgcccgtcgcagccgactccgaggtttacaagatgctgcaggagaaccag
gagtccgtggagccgccgcggcagtccgcttcattcaaagtgctgcaggagatcctggag
acgggtgaccccgataagccgtcagggttcaggagtgtgaaaccgcccgccacaaagatt
ggatcatcggtggggaacacggagaagttgccctcctgtgacaaatgtggttcggggatc
gtggggatggtggtgaagctgagggacaagttccgtcaccccgagtgctacacctgtacg
gactgcaacgtcaacctgaaacagaagggacatttctttgtggaggagcagatatattgc
gagaagcacgcacgcgagcgagtgactccgccggagggctacgacgtggtcaccgtctac
cccaagtag
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