Gasterosteus aculeatus (three-spined stickleback): 120820365
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Entry
120820365 CDS
T07457
Name
(RefSeq) neurexin-1a isoform X1
KO
K07377
neurexin
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120820365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120820365
Membrane trafficking [BR:
gat04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
120820365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
120820365
NCBI-ProteinID:
XP_040033929
LinkDB
All DBs
Position
VI:complement(8171509..8367570)
Genome browser
AA seq
1499 aa
AA seq
DB search
MVLQKPHGAHIVWVGLLLCCFAEIGTCLEFTGAEGQWARFPVWNACCESEMSFSMKTKSS
NGLLVYFDDEGFCDFLELLILNGKLSLRFSIFCAEPATVVSDTAVNDSQWHAVTIRRNFK
NTTLKVDNEKKWVEVKSKRRDMTVFSHLFVGGIPPELRSVALRLTSDAVKDQLPFTGWIT
DIKVNNTEPVMIDGEGVLEDLCGSANMCLNGGVCSIINNEPTCNCSRTGFQGKDCSEEDN
YTEGPAHLMMGDQGKSKGQRGEVWLLRSLLSIQGKEEYVATFKGSEFFCYDLSLNPIQSS
SDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFND
NDWHDVKVTRNLRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTAD
LPGSPVSNNFMGCLKEVVYKNNDVRLELSSMAKLGDPKMKVHGTVAFKCENVATLDPITF
ETPQSFIILNKWNAKKTGSISFDFRTTEPNGLLLFSHGKPKQQPKDSKNPQTLKVDFFAI
EMLDGHLYLLLDMGSGTTKTKAVNKKVNDGEWYHVDFQRDGRSGTISINTLRTAYTAPGE
SEILDLDDNLYLGGLPENKLGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDVRRLAEVQ
KAAGVKPSCSKEPPKQCLSNPCQNNGVCREGWNRYVCDCSGTGYLGRSCEREATILSYDG
SKFMKVQLPVVMHTEAEDVSLRFRSQRAYGILIATTSRDSADTLRLELESGRVRLTVNLD
CIRINCSSSKGPETIFAGQNLNDNEWHTVRVFRRGKSLKLTVDDLQSVEGQMAGDHTQLE
FHNIETGIVTEKRFMSMVPSNFIGHIQSLSFNGMAYIDLCKNGDIDYCELNAMIGFKNII
ADPVTFKSRASYVTLTTLQAYYSMHLFFQFKTTSSDGLILFNSGDGNDFIVVELVKGYLH
YVSDLGNGAHLIKGNSNKPLNDNHWHNVIISRDTNNLHTVKIDTKITTQTTTGAKNLDLK
GNLYIGGVAKEMFKELPKLVHAKEGFQGCLASVDLNGRLPDLMSDAVDCVGQIERGCEGP
STTCQEDSCANQGVCLQQWEGFSCDCSMTTFGGPLCNDAGTTYIFGRDGGLITYTWPPND
RPSTRADRLAIGFSTHLKDAVLVRVDSSSGLGDFLKLHIEKGNIAVVFNVGTDDINIEET
SKFVNDGKYHIVKFTRSGGNATLQVDDLPVIERYPTGNNDNERLAIARQRIPYRLGRVVD
EWLLDKGRQLTIFNSQTTIQIGGWERDRSGSFQGQLSGLYYNGLKVFNMAAEGDPNIRIQ
GSVRLVGESPSSITPQSSTTANRSETSTSIMEITTTTASSRRAKQTTPREPQQTTDDLLV
ASAECPSDDEDIDPCEPSSGGLANPTGGYPGTPEVFRESSSTTGMVVGIVAAAALCILIL
LYAMYKYRNRDEGSYHVDESRNYISNSAQSNGTVVKEKPVNTAKTSSKSKKNKDKEYYV
NT seq
4500 nt
NT seq
+upstream
nt +downstream
nt
atggttttacaaaagccacacggtgcccatatcgtatgggtcgggctgcttttatgttgc
tttgcagagataggcacttgtctagagttcacaggtgccgagggccagtgggccagattt
cctgtgtggaatgcatgttgcgaaagtgaaatgagcttcagcatgaaaacgaagagctcc
aacgggctgttggtttacttcgacgacgagggattttgtgactttctagaacttctcata
ctgaatggcaaactcagcctccgtttctcgatcttctgtgccgagcccgcgaccgtcgta
tctgacacggcggtcaacgacagccaatggcacgcggtcacaataaggaggaactttaag
aacacgaccctcaaggtggacaacgagaagaaatgggtggaggtgaagtcaaaaagacga
gacatgactgtttttagccacttgtttgttggtggaataccaccggaattgcgatctgtg
gcgttacggctcacatcagatgcagtcaaggatcagctgccgttcactggatggataacg
gacataaaggtcaacaacacagagcctgtgatgatcgacggtgaaggagtactagaggac
ctctgcggttcagccaacatgtgcttgaacggaggagtctgcagtataattaacaacgaa
ccaacgtgtaactgctctcggacggggttccaaggaaaggactgcagtgaagaagacaac
tatactgaaggtcccgcacacctgatgatgggcgaccaaggtaaaagtaaagggcagaga
ggggaagtttggctactaaggtcccttctgagcattcaaggaaaagaagagtacgtcgcc
accttcaaaggatccgagttcttctgctacgacttgtccttgaacccgattcaaagcagc
agtgatgaaatcacgttgtcattcaaaaccctgcagaggaatggactgatgctgcacacg
ggcaaatcagctgattacgtcaacctggcactgaaaaatggggccgtctcactcgtcatt
aatttggggtctggagcctttgaagctcttgtggagcccgtcaatgggaaatttaatgac
aatgattggcatgatgtcaaagtaacaaggaatctacgtcagcactcaggcattggacac
gctatggtaacaatatccgtggatgggattctgacaaccacgggatacacacaagaagac
tacaccatgctgggctctgatgactttttctatgttggagggagtcctagcacagctgac
ctgcccggatctccagttagcaacaacttcatgggctgcctcaaggaggttgtgtacaaa
aacaacgacgtgaggcttgagctgtccagtatggccaagctgggtgatcccaagatgaag
gttcatggcactgtggccttcaagtgcgagaatgtggccactctcgaccccatcaccttc
gagacgccacagtcttttataatactcaacaagtggaacgcgaaaaagacgggctccatc
tcctttgactttcgcaccacggagcccaacggccttctgctcttcagtcacggcaagccc
aagcagcaaccaaaggattccaagaatcctcagacgctcaaggtggacttctttgccatt
gagatgctggacggccacttgtacctgctgctggacatgggctccggaaccacgaagacc
aaggcggttaataagaaagtcaatgacggcgagtggtaccacgtggacttccagcgggat
ggcagatcaggtaccatctcgatcaacactctccgcactgcctacacagcccccggagaa
agcgagatcctggacttggacgacaatctctacctcgggggtctgccagaaaacaaactg
ggtctggtgttccccactgaggtgtggacggcgttactcaactatggctacgtgggctgc
atccgggaccttttcatcgacggacagagtaaggatgtccggcgcctcgctgaggtgcag
aaggccgccggggtgaagccctcctgctccaaggagcctcccaaacagtgcttgagcaac
ccctgccaaaacaacggagtgtgtagagagggctggaaccgctacgtgtgtgactgctct
gggactggatacctgggccgctcctgtgaaagagaggcgactatcctcagctacgacggc
agtaagttcatgaaggtccagctcccagtggtgatgcacacagaagccgaggatgtgtct
ctgcgcttccgctcccagcgagcctacggcatcctaatagccacaacgtcgagggactcg
gcagacaccctgcgcctggagctcgagagcggccgcgtccgcctgactgtcaatctagat
tgtatcaggattaactgttcctccagcaaaggtcccgagactatttttgccggtcagaat
ctgaacgataatgagtggcacacagtacgtgtcttcaggaggggcaagagtttgaaactg
accgtggatgatctgcagtccgtggaaggtcaaatggcaggtgaccacacccagctggag
tttcacaacattgaaacgggcattgtgacggagaagcgcttcatgtccatggtgccgtcc
aacttcatcggccacatccagagcctctctttcaacggcatggcctacatagacctctgt
aaaaacggcgacatcgattactgcgagctcaacgccatgatcggcttcaagaacatcatc
gccgaccccgtcaccttcaagtcgcgcgccagctatgtgaccctcactactctgcaggcg
tactactccatgcaccttttctttcagttcaaaaccacctcctccgacgggctcatcctg
ttcaacagcggcgatgggaacgacttcatcgtggtggagctggtcaaaggttacctgcac
tacgtgtctgacctgggaaatggagcccacctgatcaaaggcaactcaaacaagcccctg
aatgacaaccactggcacaacgtgatcatctccagggacaccaacaacctgcacactgtc
aagattgataccaagatcaccacgcagacgaccacaggagccaagaacctggacctgaag
ggtaacctttatatcggcggggtggctaaggagatgttcaaggagcttcccaaattggtg
catgccaaggaaggatttcaaggttgtttggcgtctgtggatctgaacggccggctccca
gacttgatgtcagatgctgtggactgtgtaggacagatagagagaggatgtgaaggcccc
agcacgacgtgccaagaggactcgtgtgccaaccagggagtgtgtcttcagcagtgggag
ggcttcagctgtgactgcagcatgaccaccttcggaggaccgctctgtaacgatgctgga
acaacatacatttttgggcgcgatggcggactgatcacatacacgtggcccccaaatgac
cgtcccagcaccagagctgaccggctagccatcggcttcagcacacacctgaaggacgct
gtcctggtgagggtggacagctcctctggtctcggagacttcctgaagctgcacattgaa
aaaggaaacattgctgttgtattcaatgtcggaacagacgacattaacattgaggagacg
tcaaagtttgtaaatgacggaaagtaccatatagtgaagtttacgaggagtgggggtaat
gccactctgcaggtggatgacctgccagtcattgagcgctaccccacaggcaacaatgat
aacgaacgcctggcgattgctagacagcgaatcccataccgacttggtcgagtagttgac
gaatggctactcgacaaagggcggcagcttacgatcttcaacagccaaaccaccatacag
attgggggctgggagagagaccgcagcggatcctttcagggccagctttcgggcctctac
tataatggcttgaaggtgttcaacatggcggcagagggagatcccaacattaggatccag
ggcagcgtgcggcttgtgggggagtcgccctcctctatcacaccgcagtcgagcaccaca
gccaaccgctcggagacgtccacgtccatcatggagataaccaccaccacggcatccagc
aggcgagccaagcagaccacacctcgagagcctcagcagacaaccgacgacctgctggtg
gcgtcggccgagtgtccgagcgacgatgaagacattgatccctgtgagccgagctcaggt
gggttagccaatcccaccgggggctacccggggacgccggaggtcttccgggagtccagc
agcacgacggggatggtggtcggcatcgtggcggcagcggccctgtgtattctcatcctt
ctttacgccatgtacaaataccggaacagagacgagggttcgtaccacgtggacgagagt
cgcaactacatcagcaactcagcgcagtccaacggcactgttgtcaaagagaaaccggtg
aacaccgcaaagacctcaagcaagagtaagaagaacaaggacaaagagtactatgtgtga
DBGET
integrated database retrieval system
