Gasterosteus aculeatus (three-spined stickleback): 120820403
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Entry
120820403 CDS
T07457
Symbol
btaf1
Name
(RefSeq) TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gat03021
]
120820403 (btaf1)
Transcription machinery [BR:
gat03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
120820403 (btaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
Vac14_Fab1_bd
TPR_Trm732_C
HEAT_2
HEAT_EZ
TOR1L1_N
ARM_ECM29
DUF594
Motif
Other DBs
NCBI-GeneID:
120820403
NCBI-ProteinID:
XP_040034041
LinkDB
All DBs
Position
VI:complement(4304341..4324075)
Genome browser
AA seq
1860 aa
AA seq
DB search
MAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLVSKVLTYLRSPNWDTRI
AAGQAVEAIVKNIPVWDPTPKLKEEPSEGLSPEDSSCDRLTFYHFDISRLLQHGASLLGS
AGAEFELQDDKTAEMDPKERLARQRKLLQKKLGLDMGAALGMDTEELFNDEDLDDTCQPS
GLRAQGSRDTAGSSSHNHLPIQAADLIDSEFRPGLSSRQKNKAKRMAKLVAKQRSRDTEP
NEKSNDSFEGEPEEKRRKTTNVVMDQPATEHKVLVDNVPDNSCLSEEILEWPLESFCEEL
CNDLFNPSWEIRHGAGTGLREIIKSHGAGGGKLGGSTAQQMLRQHQEWIEDLVIRLLCVF
ALDRFGDFVSDEVVAPVRETCAQTLGVALRHMNETGVSMTVDVLLKLLKEDQWEVRHGGL
LGIKYALAVRQDLISALLPRVLPAITVGLQDLDDDVRAVAAASLIPVVEGLVQLLPNKVP
FIVNTLWDSLLDLDDLTASTNSIMTLLSSLLTYPQVRQCSMQQSLTVLVPRVWPFLRHTI
SSVRRAALETLYTLLSKYDESCAMWINPILQEMLRHIFQSCILESNDEILELIQKVWMEL
LCQAPQQYVVAASCPWMGAWLCLMMQASHIPIDLNMLLEVKARCKDKAGSKARQGTTIQV
KETVQEYIAGAETVTEDPLTRDYVVVRSRLMAAKLLGALCRCICDPQLNAATQEIRPAES
LGQLLLFHLNSKSALQRIVVALVLCEWATLQKECRVVSSLVQPRLLAILSEHLYYDEIAI
PFTRMQNECKQLIALLAEAQIDLQDRLNCSVFTIDQANELVGAAEHISCIYRESTAGLNV
KSSEFQALDSKRQQAQATVTETNAEWQQLHLRVHMVTACAVINLQVLPEKLNPLVRPLME
TVKREENTLIQGHAASFIAKLLQQCAGRSPCPNPKIIKNLCASACIDSAVTPSSACPVPP
TQENAKGSGLEKDCIHHMVSKTRGIITLYRHQRAAFAITSKRGPAPKAPKNPTTELPPGS
SICTDSDESKKPFLIQRRGAEFSLTTVAKHFGADFTKSLPYLWENTVGPLRTVVTENQEI
DRQVQLERGDSAAQELVNSLQVLEVMAGAMAAELKPLLLEHLPHLFTCLQHPYTAVRHMA
SRCVGVLSKIAMLETMNRFLECVLPWLAAIDDCTKQEGAIEALACVMEQLDVDIVPYIVL
LVVPVLGRMSDPSDSIRFMATQCFATLIRLLPLEAGIPDPPAMSADLIRQKARERHFLEQ
LLDSRKLEDYKIPVPIKAELRKYQQDGVNWLSFLNKYKLHGILCDDMGLGKTLQSICILA
GDYYLRAQEYAKTKAPDSSPLPSLVVCPPTLTGHWVDEVGKFCHKEYLNPLHYTGPPTER
MRLQHQVRKHNLVVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAIKQLAAN
FRIILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDAKSSSREQEAGV
LAMEALHRQVLPFLLRRMKEDVLQDLPPKIIQDYYCNLSPLQVQLYEDFAKSRAKASVED
SISNTSAEEEKPKLKATGHVFQALQYLRKLCNHPSLVLTPQHPEYKRISEQLAGQSSSLR
DLQHAPKLSALKQLLLDCGLGSAGGSEGGTEAVVAQHRVLIFCQLKSMLDIVEQDLLKPK
LPSVTYLRLDGSVPAGQRHFIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDW
NPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMSIANTIISQDNASLQS
MGTDQLLNLFSLDKGEKGEQSSSTSGKSSMKSVLDGLGELWDQQQYDTEYNLDSFMHSLQ
NT seq
5583 nt
NT seq
+upstream
nt +downstream
nt
atggccgtatcaagactcgaccgtttgtttatcttgcttgacaccggaacaacaccagta
accaggaaagcagcagcccagcagcttggagaagtggtcaaactccacccacatgaactc
aataacctcgtatcaaaggtcttgacctacctcaggagtcccaattgggacactcgaata
gcagcaggccaagctgtagaggccattgtgaagaatattcctgtgtgggacccgacgccc
aagcttaaagaagagccgagcgaaggcttgtctcctgaggactcttcctgtgaccgcttg
actttctaccactttgacatctcccgccttctccaacatggggcctctctgctgggatct
gcgggggccgagtttgagctgcaggatgacaaaactgcggagatggacccaaaggaacgt
ctggcccgccagagaaagctcctacagaagaagctgggtctggacatgggcgccgccctc
ggcatggacaccgaggagctgttcaacgacgaggacctggacgatacctgccaacccagt
gggctccgagcccaaggaagcagagacacagctggatccagctcccacaaccacctgccc
attcaggctgctgacttaattgactctgagttccggccaggcctgagcagtcgtcagaag
aataaggcaaagaggatggccaagctagtggccaaacaaagatccagagacacggagccc
aacgaaaagagtaacgacagctttgagggggagcccgaagagaagcgaaggaaaaccacc
aatgttgtcatggaccaaccggcaactgagcataaagtcttagtagacaacgttccagac
aactcgtgtctttcagaggagatactcgagtggccgctggagagcttctgtgaggagctc
tgcaatgacctcttcaatccatcatgggagattcgtcacggtgctggcacaggtcttaga
gaaatcatcaagtcccacggggctgggggcgggaagttgggcggaagcactgcgcagcag
atgttgcggcagcatcaagagtggatcgaggacctggtcatccggctgctctgtgtcttc
gctctggaccgctttggagactttgtatctgatgaggtggtggctcctgtcagggagacg
tgcgctcagacactcggtgtggcccttcgccacatgaacgagactggcgtttccatgacc
gtagacgtcctgctgaagcttctcaaagaagaccagtgggaggtccgtcacggaggcctg
ctggggatcaagtatgccctggctgtccggcaggacctgatttctgccctactaccccga
gtacttcctgccatcactgtaggcctacaggacctagatgacgacgtcagggccgtggcc
gccgcatccctcatccctgtggtggaaggcttggtacaactactgcctaataaggtaccc
tttatcgtaaacacgctatgggattctcttttggacctggacgacctcactgcttccacc
aacagcatcatgacactgctgtcctcgctgctcacctacccgcaggtccgccagtgcagc
atgcagcagtcattgacggtcttggtccctcgggtttggccgttcctgagacacaccata
tcgtcagtaagacgggcggcgctggaaaccctttacacgctgctctctaaatacgacgag
agctgcgctatgtggatcaaccccatcctacaagagatgctgcggcacatcttccagtct
tgcatactggagagcaacgatgaaatccttgaactgattcaaaaggtgtggatggagctg
ctgtgccaggccccgcagcagtacgtggtggcggccagctgtccgtggatgggcgcctgg
ctctgtctcatgatgcaggcctcacacatccccatagacctcaacatgctgctggaagtg
aaggcccgctgcaaggataaggctggttcaaaggcacgtcaagggaccaccattcaagtg
aaggagacggttcaggagtacatagcgggtgcagagactgtgacggaggacccactaacg
agggactatgtggtggtccggtctcgcctcatggctgccaaattgctgggagctctgtgt
aggtgtatctgtgaccctcagctcaatgctgcaactcaggagatccgaccagccgagtct
ttgggccagctgttgctcttccacctcaactccaagtccgccttgcagcgcatagtggtg
gctctggttctttgtgagtgggctacgctgcagaaggagtgtcgggtggtgtcgtctttg
gtgcagcctcggcttctggccattttgtcagagcatctgtactacgatgagatcgccatc
cctttcacacggatgcagaacgagtgcaagcagctcattgcgctgctagctgaggcccaa
atagacctgcaggaccgcctcaattgtagcgttttcactattgatcaagccaatgaactg
gtaggtgcagccgaacatatcagttgtatttatagagagtcgacggcgggtctcaacgta
aagtccagtgagtttcaggcgctggacagtaaacggcagcaggcccaagcaacggtaacg
gaaaccaacgcggagtggcagcagctgcacctgcgcgttcacatggtcacggcctgcgcc
gtgattaacctccaggtgcttcctgaaaagctcaatccgctggtcaggcctctgatggag
actgtcaaacgggaggagaacacactcatccagggacacgccgcgtctttcatagccaag
ctgctgcagcagtgtgccggacgctcgccttgccccaatcccaaaatcatcaaaaacctc
tgtgcctcggcctgcatagactctgctgtcaccccctcctctgcctgccccgttcccccc
acacaggaaaatgcaaaaggcagtgggttagagaaagattgcattcatcacatggtgagc
aaaacccggggtataatcaccctgtaccgccaccagagggcggcgtttgccatcaccagt
aagaggggtccagcccctaaagccccaaaaaaccccaccacagagcttcctcctggcagc
tccatctgcactgatagcgatgagagcaagaagccgtttcttattcagaggcggggggcg
gagttctctctgacaacggttgccaagcacttcggcgcagacttcacaaagtcgctgcca
tacctatgggagaacacagtgggaccactgaggaccgtagtgactgagaatcaagaaatt
gatagacaggtccagctggagaggggagactctgcagctcaggaactagtcaactctcta
caagtgctggaagttatggctggtgccatggctgctgagctcaaacctttgctgctggag
cacctaccccatctgttcacctgcctgcagcacccgtacacggcagtgcgtcacatggcg
tcgcgttgtgtgggcgtgctcagtaagatcgccatgctggagaccatgaaccgcttcctg
gagtgtgtcctcccctggttggcagctatcgacgactgcaccaaacaggagggggccatc
gaggcactcgcctgtgtcatggagcagcttgacgtggacattgtgccctacatcgtgcta
ctcgtagtgccggtgctcggccgcatgagcgaccccagcgatagcatccgcttcatggcc
acacagtgcttcgccactctcatccgcctgttgcccctagaggctggcatacccgaccct
ccggccatgtccgctgatctgatccggcagaaggccagagaacgccacttcctggagcaa
ctgctagatagcaggaaattggaggactacaagatccctgttccaatcaaggctgagctg
aggaagtaccagcaggacggagtgaactggttgtccttcctgaacaaatacaagcttcat
gggatcctgtgcgacgacatgggcctcggcaagactctgcagtccatctgcattctggca
ggagattactacctcagggcacaggagtatgccaagacgaaggccccggacagcagcccc
ctgccctctctagtggtgtgtcctcccacgctgaccggccactgggtggacgaagtgggc
aaattctgccacaaagaatacctcaacccgctgcactacactgggcctcctacggaacga
atgcggctgcagcaccaagtgagaaaacacaacctcgtagtggcctcttacgatgttgta
cggaatgacatcgacttctttaggaatatcaaatttaattactgcatcctcgatgagggt
catgtaattaagaacgggaaaaccaaactctccaaagccattaagcagctggctgccaac
ttccgaatcatcttgtcaggaacgccaattcagaacaacgtcctggagctctggtcgttg
tttgacttcctcatgccgggcttccttggaacggagcggcagtttgcggctcgctacggt
aaaccgatcctggccagtcgggacgccaaaagttcctcacgggagcaggaggcaggtgtc
ctggcgatggaggcgttacaccgacaggtgttacccttccttctgaggaggatgaaggag
gatgtcctccaggaccttcctcctaaaataattcaggactattactgcaacttgagtcct
ctacaggttcagttatacgaagactttgcaaagtctcgagccaaggccagtgtggaggac
agcatctctaatacctctgcagaggaggagaagcccaaactgaaggccaccggccatgtc
ttccaggctctgcagtacctgaggaagctgtgtaatcacccgagcttggtcctgaccccg
cagcaccccgagtacaagcgcatcagcgagcagctcgccgggcagagctccagcctgcgg
gaccttcagcatgcgcccaaactctccgctctcaaacagctgctgttggactgcggcctc
ggcagcgctggaggctccgaggggggtacagaggccgtcgtggcccagcaccgcgtcctc
attttctgtcagctgaagagtatgctggacattgtggagcaggatctcctgaaacccaaa
ctgccctccgtcacctacctgaggctggacggcagcgtgccggccggccagcgtcacttc
atcgtttccaggtttaacaatgacccatctattgacgtgctgctgctgaccacccatgtc
gggggtctaggcctcaacctgactggtgcagacaccgtggtgtttgtggaacatgactgg
aaccccatgagggaccttcaggccatggatcgtgcccataggataggacagaaacgcgta
gtgaacgtgtaccggctgatcacgcgcggcacgctggaggagaagatcatgggtctgcag
aagttcaaaatgagcatcgccaacaccatcatcagccaagacaacgccagcctgcagagc
atgggcacggaccagctcctcaacctcttcagcctcgacaagggcgagaagggtgagcag
tcgtcgtcgacctctggcaagtcctccatgaagtctgtgctggacggcctcggggagctt
tgggaccagcagcagtacgacacagagtacaacctggacagcttcatgcactcgctgcag
tag
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