Gasterosteus aculeatus (three-spined stickleback): 120820415
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Entry
120820415 CDS
T07457
Symbol
papolg
Name
(RefSeq) poly(A) polymerase gamma isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120820415 (papolg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120820415 (papolg)
Enzymes [BR:
gat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
120820415 (papolg)
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
120820415 (papolg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
DUF4269
Nrap_D2
GH97_C
Motif
Other DBs
NCBI-GeneID:
120820415
NCBI-ProteinID:
XP_040034051
LinkDB
All DBs
Position
6:complement(5194890..5209298)
Genome browser
AA seq
836 aa
AA seq
DB search
MKEMSSNMPGGQQPQKHYGITSAISLAPPREIDNQYTKKLCDAMKPFGVFEDEEELNHRL
AVLGKLNNFVKEWISEISELKNLPPSAISCVGGKIFTFGSYRLGVHTKGADIDALCVAPR
HVERSDFFQSFFEKFKQHEEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLALQSIPDNL
DLRGDSILRNLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRGIYSNMLG
FLGGVSWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNLNLPVWDP
RVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTIMSEEFKYGLSVTDEILQGKAEWSKLF
EPPNFFQKYKHYIVLTASASTEENHLEWIGLVESKIRVLVGNLERNEYITLAHVNPQSFP
GSKENRNENDFVSMWFIGIIFKKVENAESVNIDLTYDIQSFTDTVYRQANNINMLKDGMK
IEATHVKKKQLHQYLPPELVQKKKRSIAELNRSSNGGSSKRISLDSSHLDSSRDTDSGTP
FTSPSSKPLKPASDTEDSVSPPKQLFVEAFPAPGAEAAAAATATDQGMSIPVIGSNSEEP
AAKAKPASPPASSSSATAQSGDEEPNPASSPQEEPNGLEDPVNGASVKRPHSPTQEDLAK
RHKETEVVANDDSAFKEPYPPSSDSCTQGETALSGSKAKPIPTIDTSRTQRLPSMELPDA
SSPLPASNSCRVVKNSIKLALNRHNITPPKPTVCEGPVTADAPPAVEEKGMSIPVIGSKH
VASKLAVPPVGSSIPTLVSRVADPLNGATAKRPHSPSLEEQAKRLKETEKARIHIA
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaatgtcgagcaacatgcctggtgggcagcagcctcagaaacactatggcatc
acttctgccatcagcctggcccccccgcgagaaatagacaaccagtacaccaagaagctc
tgcgacgctatgaaaccttttggggtgtttgaagacgaagaggaattgaaccaccgactt
gcagttctcgggaagttgaataactttgtgaaagaatggatctcagagattagtgaatta
aagaacctcccgccttcagctataagctgcgtcgggggcaagatatttacatttggttcg
tacaggcttggagtacacacaaaaggagctgatattgatgccttatgtgtggccccacgc
cacgtagagagaagcgactttttccagtctttctttgagaaattcaaacagcacgaagaa
atcaaagacctgagggctgtggaggatgcttttgtaccggtgataaaattcaaatttgat
ggaatagagatcgacctgctttttgccagactggccttacagtccattccagacaacttg
gacctgaggggagactccatcctgaggaacctggacatccggtgtatccgcagtcttaac
ggttgtcgagtgactgatgaaattctgtacctggtgccaaacaaggagaactttaggctg
acactgagagccatcaaactgtgggccaaacgccgtgggatttactccaacatgctgggc
tttctgggcggagtgtcttgggccatgctggtggccaggacctgccagctgtacccaaac
gctgtggccgccacgctggtccacaagttcttcctggtgttttccaaatgggagtggccg
aatcctgtgctattgaaacagccggaggacagtaatctgaatttacccgtgtgggatccc
agagtgaacccatccgacagataccacctgatgcccatcatcacccccgcctacccccag
cagaactccacgtacaatgtctccacgtcgacgcgcaccatcatgagcgaggagttcaaa
tacggccttagcgtcacagacgagatccttcagggaaaagctgaatggtccaaactcttt
gagccaccaaactttttccaaaagtacaagcattacatcgtgctgaccgccagcgcttcc
acagaagaaaaccatttagaatggatcggcctggtggagtcaaagatccgcgttctggtg
ggaaacctggagaggaatgagtacatcaccctggctcacgtcaacccccagtccttcccc
ggctccaaagagaaccgcaacgagaacgactttgtgtccatgtggttcattgggatcatc
ttcaagaaagtggagaacgcggagagtgtgaacatcgacctgacgtacgacatccagtcc
ttcacagatactgtttacagacaagccaacaacatcaacatgctgaaggatgggatgaag
attgaagcgacgcacgtgaagaagaaacagctccatcagtaccttcctcccgaactggtg
cagaagaagaagaggagtatagcggagttgaaccgtagctccaatggggggagctctaag
cgcatctctctggacagcagtcacctggacagctccagagacactgactcggggactccc
ttcacctccccatccagcaaacccttgaagcccgcgtccgacacggaggacagcgtcagt
cctcccaagcagctctttgtggaggccttcccagcacccggtgctgaagcagcagcagca
gctactgctacagaccagggcatgtccatccctgttattggctccaattccgaagagcca
gcggccaaagcgaagcccgcctccccgccggccagcagctcctcggcgacggcgcagagc
ggcgacgaggagcccaaccccgccagcagcccccaagaggagcctaacggcctagaggac
ccggtcaacggcgcctctgtcaagagaccgcactcgccaacgcaagaggacttggccaag
aggcacaaagagacagaggtggttgcaaatgatgactctgcttttaaagagccatatccg
ccgtcctcagactcatgcacacagggagaaaccgccctctccggctcaaaggcgaagccg
attccaaccatcgatacctcgagaacacagagacttcccagcatggagctgccagacgcc
tcctcgcctctaccagccagcaacagctgccgcgtcgtgaagaattccattaaactggcc
ctcaatcgccataacatcacacctcccaagcctacagtgtgtgagggccccgtcaccgcc
gacgctcctcctgcagtcgaagaaaagggcatgtccattcccgtcatcggctcaaaacac
gtggcgtccaaactcgcggtgccgcccgtcggcagctccatccccacgctggtgagtcga
gtggccgacccgctgaacggagcgaccgccaagaggccccactctccctccctggaggag
caggccaagcggctcaaagagacggaaaaggccaggatccacatagcttga
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