Gasterosteus aculeatus (three-spined stickleback): 120820420
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Entry
120820420 CDS
T07457
Symbol
rrp12
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gat03009
]
120820420 (rrp12)
Ribosome biogenesis [BR:
gat03009
]
Eukaryotic type
90S particles
Other 90S particles
120820420 (rrp12)
Pre-60S particles
Other pre-60S particles
120820420 (rrp12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
Motif
Other DBs
NCBI-GeneID:
120820420
NCBI-ProteinID:
XP_040034063
UniProt:
A0AAQ4PLS1
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Position
VI:complement(9933115..9942485)
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AA seq
1288 aa
AA seq
DB search
MVKSGKLRAGTGSKLKRWKKGHSSDSNPQTSRFREAAKSRFFSRPTGKSDLTVDALKLHN
DLQAGPLELGGRKDACMEEEPDEVFSERTAGTFLSGLSDCSNLTFRKVQRYWESNSASHK
EICAVLAAVTEVIRGQGGKETETEYFAALMTTLEVVDSPESQAAVGYLLNLVMKRVPTPV
LMSKFSDTTKALMDVMSKQAMFETASALRWILSCLATLLRKQDASVWTYPSTLQAYHGLL
SFTVHSKPKVRKAAQQGVCAILRGSDFLFTDNAPTHHPAAATTAKFCMKEMEQAGGSKED
TTTLHVLGLLKELMGTFPLGAVKSCCETLLRVMTLSHVLVTASAMQAFHRLFSGKPNASN
LSPELTAQIITALYDYLPSETDLQPLLAWLAVMEKAHVYLASSQSSLSLGHLPRLFSAAM
SCLLSPHTQVVAAATSTLKTLITECVAPHMEGMGMISATTSAGNPSYVCKMFRIVEEGLS
YRFHASWPFVLQILGCFYRAAGKRAHPLMAKSLQSLADLRSTPHFPFSGELDLAVGGAVE
SMGPEVVLSAVPLNITGYEDDLEFPRSWLVPVIRDHVKNTNLSFFSSYFLPLASTLKQRA
EELDQVGQKLEARVYKTLQMQIWTMLPGFCTCPLDLLASFKGIARTLGMVINERPDLRLT
VCQALRTIVTKSSSTEEEKAEVGRFSKNFLPILFNVYGQQPAAGEAGTYRMAVLDTIKVY
LTVSDTQMICTFLQKATDRLNSTDTNEFTRLSMMDLVIAMAPSVDEVTMTKTFELIKPYL
ETKEPAMQKKAYRVLEELCGGESDECRSFVVTNLETLKVVLLDTLKNASSPAKRPRLKCL
IHIVKSLNEEHKDFITMLLPEVIICTKEVSVGARKNAYSLLVEMGNAFVRFCGNTKDAID
EYFALVYAGLTGSVTMITCTVLALTRLVFEYKDAVDVTTMKELLHNVCLLLTSRTREIVK
AALGFIKVILFIMEPKTLASHATVMMEGVGNIKDDVRRHFRTKLKNIFTKFIRKFGFELV
KSMLPVEHHKVLANIRKAEARTKRKRQASEQQNDSDSEAEEPKTKSQNIEDILAETDSDM
SEDEGQPRNAQKRAVKPRKARAWLKEGEDDDPLNFLDPKVSQRVLATNPAMKKSAKVEHG
FKVTSDGRLIIREDDEEDAKHDAEEEKKDILEEAGVKSKRSLKRKFQDHNSDDDMNVQPQ
HKYKAGGSGIHRSFAGREDTGTDYKSRKGKGDVMKKGKHDPYAYIPLRKAQLNRRKRAKL
QGQFKGMVRGAQKGALSGKKMQKKKRKA
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaatcggggaaacttcgagctggaacgggttcaaaactcaaacgatggaagaag
ggacacagtagcgactcgaacccgcagacgagtcgttttcgggaggctgccaaaagtcgc
ttcttcagccgacccaccggaaagagcgacctaacggttgatgctcttaagctacacaat
gatctgcaggcaggtcccctggagctcggtgggcgtaaagatgcctgtatggaagaggag
ccagatgaagtgttttcagaaaggaccgcaggcaccttcctcagcgggctgtcggactgc
tcaaacctgaccttcagaaaggtgcagcgctactgggagtccaattcagcatctcacaaa
gagatttgcgcagtgttggcagcggttactgaggtgatccgtggtcaaggagggaaggag
acggaaactgagtactttgctgcattgatgaccacactggaagttgttgactcaccagag
tctcaggctgctgttgggtaccttctcaacctcgtcatgaaacgtgttcccactccggtg
ctgatgtctaagttctcggacaccaccaaggctctgatggacgtcatgtcaaaacaggcc
atgtttgagactgcctctgccctcagatggatcctgtcctgcctggccactttgctgagg
aagcaggatgcatcagtctggacttacccatctactcttcaggcttaccacggacttctc
agcttcacagtgcacagcaagcctaaggtccgtaaggcagcgcagcaaggagtttgcgcc
attctcagaggcagcgacttcctctttacagataatgctccaacccatcaccctgctgct
gccaccacagccaagttctgcatgaaagaaatggaacaggcaggaggcagcaaagaggac
accaccacacttcatgtgctcggtcttctgaaggagttaatggggacatttcctctagga
gctgtcaagtcctgttgtgagactctgctgcgggttatgactctcagccatgtgctggtg
accgctagtgccatgcaggcctttcataggctcttcagtgggaagccaaatgcctcaaac
ctctcaccagaactcactgcccagataatcacggctctgtacgactatctgcccagtgag
actgatttgcagcctctgctggcttggctcgctgtcatggagaaagcacacgtttacttg
gccagttcgcagagttctctgagtttgggtcacctccctcgcctcttctctgcggccatg
tcctgtctgttgtcgcctcatacgcaggtggttgcagcggccacaagtacactaaagaca
ttgataactgaatgtgttgcccctcacatggagggaatgggaatgatctccgccacaacc
tctgcagggaacccatcctatgtctgcaaaatgtttcgtatcgtagaagaaggattgtct
tatcgcttccacgcgtcctggccattcgtgctgcagatcctgggttgcttctatcgagca
gccgggaaacgagctcacccccttatggccaagtccctgcagtctctggcagacctgcgc
tccacccctcatttccccttcagcggggagttagacctggctgtaggaggagccgtagag
agcatggggcctgaggtcgtgctgagtgccgtgcctctcaacatcaccggctacgaggat
gatttggagttcccgcgcagctggctggtccccgtcatacgggatcacgtgaagaacact
aaccttagtttcttttcttcttacttcctccctctggcctctacactcaagcagagagcc
gaagaattggatcaagtggggcagaaacttgaggccagagtctacaagacattacagatg
cagatttggaccatgctgccgggcttttgtacgtgtcccttggacctgctggcatccttc
aaaggcattgcccgcacactcggtatggttattaacgaacggccggacctgaggctcaca
gtgtgccaggccctgcgtacgatcgtcaccaagagcagctccactgaggaagaaaaagct
gaagtgggccgcttctccaagaacttcttgcccatcctcttcaatgtgtacggtcagcag
cctgcagctggagaggccggcacctacaggatggctgtgctagacaccatcaaggtctac
ctaaccgtctccgacacacagatgatctgcaccttcctgcaaaaagccacggacagattg
aacagcactgacaccaatgagttcacacggctgtcaatgatggaccttgtaattgccatg
gctccttctgtagatgaggtcaccatgactaaaacctttgagctcatcaagccatatttg
gagaccaaagagccagccatgcagaagaaggcgtaccgggtgctggaggagctgtgcgga
ggagagagcgatgagtgcagatcatttgtcgtgactaatctggaaacactcaaagtcgtc
ctgctcgacactctgaaaaacgcctcctccccagcaaagaggccaagactgaagtgtctg
atccacatagtgaaaagcctcaatgaagaacacaaagacttcataacaatgctgctgcca
gaggtgatcatatgcaccaaggaggtgtccgtaggagcacgtaagaatgcctacagtctg
ctggtggagatgggaaacgcatttgtccgcttttgtgggaacacaaaagatgccatagat
gagtactttgcgttggtgtacgcgggactcacaggctccgtcactatgatcacatgcaca
gttttggcgctaactcgactggtgtttgagtataaagacgctgtagatgtgaccaccatg
aaagagctgctgcacaacgtgtgtctgctgctgacatctcgtaccagagagatagtcaag
gccgctttgggcttcatcaaggtcatcctcttcatcatggagcccaagacgctggcatct
cacgccactgtcatgatggagggagtcgggaacatcaaagacgacgtgaggaggcacttc
agaaccaaactgaagaacatctttaccaagttcatccgaaagtttggttttgagttggtg
aaaagcatgctgcctgtagagcaccacaaggtcctcgcaaacatccgcaaggccgaggct
cgaaccaagaggaagagacaggcctcagagcagcagaacgactctgacagtgaagctgag
gaacctaaaactaagagccaaaatattgaggacatccttgcagagaccgacagtgatatg
tcagaggatgaaggacagcctcgcaatgctcagaagagagcggtcaaaccccggaaagct
cgggcctggctcaaagaaggagaggatgacgacccgctgaacttcctggatcccaaggtc
tcccagagagtgctagccaccaacccagcgatgaaaaagagtgccaaggttgagcacggc
ttcaaggtgacatcggacggacggctgatcatcagagaggatgacgaggaggatgcaaag
cacgatgctgaggaggagaagaaagatatcctagaagaggctggagtcaagagtaaaagg
tcactgaaaaggaagttccaagatcacaactctgatgacgacatgaatgttcaaccccag
cacaaatacaaagctgggggctcaggtatccacaggtcctttgcaggaagggaagacacg
ggaacagactacaagtcaaggaaaggaaaaggagacgtgatgaaaaagggaaagcacgat
ccgtatgcttacatccctctgaggaaggcccagctcaatcgaaggaagcgtgccaaactg
cagggccagttcaagggcatggtgagaggagcccagaagggggcgctgtctggaaagaaa
atgcagaagaaaaagaggaaagcctaa
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