Gasterosteus aculeatus (three-spined stickleback): 120820513
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Entry
120820513 CDS
T07457
Symbol
snx5
Name
(RefSeq) sorting nexin-5
KO
K17920
sorting nexin-5/6/32
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120820513 (snx5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120820513 (snx5)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gat04990
]
120820513 (snx5)
Membrane trafficking [BR:
gat04131
]
Endocytosis
Macropinocytosis
Sorting nexins
120820513 (snx5)
Domain-containing proteins not elsewhere classified [BR:
gat04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
120820513 (snx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
Motif
Other DBs
NCBI-GeneID:
120820513
NCBI-ProteinID:
XP_040034312
UniProt:
A0AAQ4Q9H9
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Position
VI:7432209..7438460
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AA seq
399 aa
AA seq
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MTSSIDESNKEKMRSVSVDLNHDASLLIDIPDALCERDKVKFTVHTKTTLSSFQKPDFSV
PRQHEDFIWLHDTLVETEDYAGLIIPPAPPKPDFESPREKMHKLGEGEATMTKEEYTKMK
QELEAEYLAVFKKTVQVHEVFLQRLSSHPFLSKDRNFQIFLEYDQDLTVRRKNAKEMFGG
FFKNMVKSADEVLISGIKEVDDFFEQEKTFLLDYYSKIKDSTAKAEKMTRSHKNIADDYI
HISATLSTLSADDTTANKKHLEKLADLFEKLRKVEGRVASDQELKLTELLRYYMRDIQAA
KDLLYRRARALVDYENSNKALDKARLKSKDIPQAEQHQQQCLQKFDKLSDSGKKELTSFK
GRRVVAFRKNLIEMAELEIKHAKNNVTLLQGCIDLLKSI
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgacatccagcatagacgaaagcaacaaggaaaagatgcgctccgtgtccgtagatctg
aaccatgacgcctctcttctcatcgacattcctgatgcactctgtgaaagggacaaagtc
aagtttactgtccataccaagacaacactaagctctttccagaagccagatttttccgta
ccaaggcagcatgaagacttcatctggctacatgacactctggttgagacggaggactat
gctggcctaattattcctccagcgcccccaaagcctgactttgagagcccgagagagaaa
atgcacaaacttggggaaggtgaagccactatgaccaaggaggagtacactaaaatgaag
caggagttggaggctgagtacctggctgtgttcaagaaaaccgtccaagtgcacgaagtc
ttcctgcagagattgtcctctcacccctttttaagcaaagaccgaaacttccagattttc
ttagagtatgaccaggatctaactgtgcgaagaaagaatgccaaggaaatgtttggcgga
ttctttaaaaacatggtgaagtcagctgatgaggtccttatctcaggaataaaggaagtg
gatgatttttttgagcaagagaagacattcctgcttgactactacagcaagataaaggat
tccactgccaaagccgagaaaatgacgcgctcgcacaaaaatattgcggatgattacatc
cacatctctgccactctgagcactctctctgctgatgataccacagcaaataaaaagcac
ttggagaaattggccgacctgtttgagaagctccgaaaagtagagggaagagtagcatct
gaccaggagctgaaactcacagagcttctcagatattacatgagagacatccaggctgcc
aaggaccttctgtacaggcgagctcgggcgttagtggactatgagaactccaacaaggct
ttggataaggctcgactgaagagcaaggacattccccaggcagagcagcaccagcagcag
tgcctgcagaaatttgacaaactctcggattctggaaagaaagaactcaccagtttcaag
ggcaggcgcgttgtggccttcaggaagaacctgatcgagatggccgagctggagataaaa
catgccaagaacaacgtgactctattgcagggatgcattgacctgctcaagagcatctga
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