Gasterosteus aculeatus (three-spined stickleback): 120820520
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Entry
120820520 CDS
T07457
Symbol
spast
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120820520 (spast)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gat04812
]
120820520 (spast)
Enzymes [BR:
gat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
120820520 (spast)
Membrane trafficking [BR:
gat04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
120820520 (spast)
Cytoskeleton proteins [BR:
gat04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
120820520 (spast)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
MIT
AAA_22
AAA_5
TIP49
AAA_16
AAA_14
Mg_chelatase
IstB_IS21
NPHP3_N
DUF815
AAA_2
nSTAND3
AAA_24
AAA_19
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
120820520
NCBI-ProteinID:
XP_040034341
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All DBs
Position
6:complement(6748438..6752377)
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AA seq
474 aa
AA seq
DB search
MATKSRDSGEVIKNYHKQAFEYVSKALRIDEDDSGDKEEAAQWYKKGISELQRGIAVEIT
GQAGEQYDRSKRLQDKMVTNLTMARERLALLEETMASKRRSNPQRTPSRDLPQPKPVPKS
QPAARATSTNARPSTFAKPASRPTDPKVTPRVGKPQNGKATGVRNAPKRDMKNFKNVDSK
LANLIMNEIVDSGASVSFGDIAGQNVAKQALQEIVILPALRPELFTGLRAPARGLLLFGP
PGNGKTMLAKAVAAESNSTFFNISAATLTSKYVGEGEKLVRALFAVARELQPSVIFIDEV
DSLLCERREGEHDASRRLKTEFLIEFDGVQSGADDRVLVMGATNRPQELDEAVLRRFAKR
IYVALPDAETRLTLLKNLLEKHRNPLSTNELSSLAKMTAGYSGSDLTSLAKDAALGPIRE
LCPDQVRSMAASEMRNIKMKDFEDSLKRIKPSVSSTTLNMYTKWNKEFGDTTAF
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggcaactaaaagcagagacagcggcgaagttatcaaaaactaccacaaacaggcgttc
gagtacgtttccaaggcactacggatcgacgaagacgattccggagataaagaggaggcg
gcgcagtggtacaagaagggcatttctgagcttcagagggggatcgcggtagagatcacc
ggacaagcaggagagcagtatgacagatccaagagactacaagataaaatggtcaccaat
ctcaccatggccagagagcggctggctcttctggaggagaccatggcatctaaaaggaga
agcaatccacagaggaccccgagtcgtgatcttccacaaccaaagcctgtccctaaaagc
cagcctgcggcgcgagccacgtccaccaacgcccggccctccaccttcgctaaacccgct
tccagacccaccgacccgaaggtgacaccgcgggttggaaaacctcaaaatggaaaagcc
acaggtgtaagaaacgccccgaaaagggatatgaagaactttaagaatgtggacagcaaa
ctggccaacttgattatgaatgaaattgtcgacagcggggcgtctgtatcctttggcgac
attgcggggcagaacgtggccaagcaagcgctccaagaaattgtcattctccctgcctta
agaccggagctcttcaccggcctgagagctccggcacggggcttgcttttatttggcccg
cctggaaatggcaaaaccatgttggccaaagcagtcgcagccgagtccaattcaacattc
ttcaacatcagcgcagccactttgacgtctaaatatgtgggagagggagagaagctcgta
cgagcactgtttgcagtggccagagaactgcagccctctgtcatcttcattgatgaagtt
gacagcttgctttgtgaaaggagggagggagaacatgacgcctctcggcgattaaaaacc
gagttcctcattgagttcgatggggtgcagtcaggagcggatgaccgggtgctcgtgatg
ggagcgaccaacaggcctcaggagctcgacgaagcagtgctgaggcgctttgcaaaaagg
atttatgtggcattgcctgatgcagagacaagactaacgctgctgaaaaaccttttggaa
aagcatcggaatccattgagcacaaatgagctttcctctctcgcaaaaatgactgcggga
tattcgggaagtgatctcacgtcattagccaaagatgccgcccttgggccaattagagaa
ttgtgtcccgaccaagttcgaagtatggctgctagtgagatgcgtaacatcaagatgaaa
gactttgaggattccctgaagcgcattaagcccagcgttagctcaacgactctcaatatg
tataccaaatggaacaaagaattcggagacacaacagccttttga
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