KEGG   Gasterosteus aculeatus (three-spined stickleback): 120820532
Entry
120820532         CDS       T07457                                 
Symbol
cdc5l
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
gat  Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120820532 (cdc5l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gat03041]
    120820532 (cdc5l)
   03400 DNA repair and recombination proteins [BR:gat03400]
    120820532 (cdc5l)
Spliceosome [BR:gat03041]
 Complex B
  Other components
   Prp19 complex
    120820532 (cdc5l)
 Complex C
   Prp19-CDC5 complex
    120820532 (cdc5l)
DNA repair and recombination proteins [BR:gat03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    120820532 (cdc5l)
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect Rap1_C
Other DBs
NCBI-GeneID: 120820532
NCBI-ProteinID: XP_040034371
UniProt: A0AAQ4NX03
LinkDB
Position
VI:complement(17249840..17256215)
AA seq 812 aa
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKK
TEWSREEEEKLLHLAKLMPTQWRTIAPIIGRTAAQCLEHYEYLLDKAAQRDNEEEVGDDP
RKLKPGEIDPNPETKPARPDPVDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEAR
RLAALQKRRELRAAGIDVQKKRKKKRGVDYNAEIPFQKKPAPGFYDTSMEEYNALEPNFK
RLRQQHLEGELRNEQEERDRKKDRQKIKKKKESDLPSAILQTSGVAEFTKKRSKLVLPTP
QISDVELEEVVKLGVASEVARQAAEESESGNSASSALLSEYSVTNTMNAGLRTPRTPTVQ
DRILQEAQNLMALTNIDTPLKGGLNTPLTESDFSGVTPQRQQIQTPNTVLSTPFRTPGQG
QGQEGMTPQPGGVMTPRGPVTPGLTPLRTPLRDKLNINSEEQLADPAFSKHMQRESLQQL
RQGLSSLPVPKNDFEIVLPENAEKELEETEAETGFIEDSADIELRKKAIRDAEREKELKL
RHTSVQRSLPRPTEVNESVLRPASMEQLLDLQLAEELIKQEMITMLHHDCLHHPVANAAS
QLQRGKTRGPASTSNNASHIAYLETHLYKPVSTEDMEQAKTMLAAEMEVVKGGMGHGDLS
MEAYSQVWEECYGQVLYLPAQNRYTRANLASKKDRIESLEKKLDVNRGHMTAEARRAAKL
EKKLKILLGGFQSRALGLLKQHGELWEQVEQAATELETFKQLKKQEDTAIPRRKEALRED
VERQMDRERELQQRYAEITMEREAMVNSAQKY
NT seq 2439 nt   +upstreamnt  +downstreamnt
atgccgcgaattatgataaaaggaggcgtctggcgcaacacggaggatgagatcctcaag
gcagcggtgatgaaatatgggaaaaaccagtggtctcgaatcgcctctctgctgcaccga
aagtctgccaaacagtgcaaagccagatggtacgaatggttggatcccagcatcaagaaa
accgaatggtccagagaagaggaggagaagctgctccatttggccaagctgatgcccacc
cagtggaggaccattgctcccatcattggacgcactgctgcccagtgcctggagcactat
gaatacctgctcgacaaggcggcacaaagagataatgaggaagaagtgggcgatgacccc
aggaagttaaaaccaggagagatcgaccctaatcctgaaactaaaccagccaggcccgac
cctgtggacatggacgaagatgagctggagatgctgtcggaggccagagctcgactggcc
aacacccagggcaagaaagccaagaggaaggccagagagaaacagctggaggaagccagg
cgtttggccgctctgcagaagcgcagagagctgagagcggccgggatcgacgttcagaag
aagaggaagaagaagagaggagtcgactacaatgctgaaatccccttccagaagaaaccc
gctccgggtttctatgacaccagcatggaggagtacaacgctctggagcccaacttcaaa
cggctcagacagcagcacctggaaggagagctgcgcaatgagcaagaggagagagaccga
aagaaggatcggcagaagatcaagaagaagaaggagagcgacctcccgtctgccatcctg
cagaccagcggagtggccgagttcaccaagaaacgctccaagctggttttaccgaccccg
cagatcagtgacgtcgagctggaggaggtggtgaaattgggcgtagccagcgaggtcgcc
cgtcaggccgcggaggagagcgagagcggcaactctgcctcctccgccctcctgtcggag
tacagcgtcaccaacaccatgaacgcggggctgcgcaccccgcgcacccccacggtgcag
gaccggatactgcaggaagcccagaacctgatggctctgaccaacatcgacaccccccta
aagggaggcctcaacactccgctgaccgagagcgacttcagcggcgtgacgcctcagcgg
cagcagatccagactcccaacacggtcctcagcacgccgttcagaacaccggggcagggt
caagggcaggagggcatgaccccgcagcccggaggagttatgacaccgcgcgggcccgtg
accccgggtttgacccccctccgcacgccgctgagagacaaactgaatattaacagcgag
gagcaactggccgacccggcgttctccaaacacatgcaaagggagagcctgcagcagctg
aggcagggcctgtcgtcacttcctgttcccaagaacgactttgagatcgttcttcccgaa
aacgcagagaaggaactcgaagaaacggaagcggagacgggattcatagaggactccgcc
gacatcgagttacgcaaaaaagctatacgggatgcagagcgagagaaggagctaaagctg
cgacacacgtcggttcagaggagcctccccagacccacagaggtcaacgagtctgtcctg
cgtccggcctccatggagcagctgctggacctgcagctggccgaggagctgatcaaacag
gaaatgatcaccatgctgcaccacgactgcctgcaccacccggtggccaacgccgccagc
caactgcagcgcggcaagaccagaggccccgcctccacgtccaacaacgcgtcgcacata
gcgtacctggaaacgcatctctacaagccggtcagcacggaggacatggagcaggcgaag
acgatgctggcagcagagatggaggtggtgaagggcggaatgggccacggtgatctcagc
atggaggcctacagccaggtgtgggaggaatgctacggacaggttttgtatcttcccgct
cagaaccggtacaccagggccaacctggcgtcaaagaaagaccgaattgaaagtctggag
aaaaaacttgacgtgaaccgcggccacatgacagcagaggctcgtagagctgctaaactg
gagaagaaactgaaaatcctcctgggcgggtttcagtccagagccctggggctcctgaag
cagcacggagaactctgggagcaggtggagcaggcagccacagagctggagaccttcaaa
cagctgaagaaacaagaggacactgcgatccccaggaggaaagaggctctccgggaggac
gtggagaggcagatggaccgtgagcgagaactccagcagagatatgcggagatcacgatg
gagagggaggccatggtcaacagcgcccagaaatactaa

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