KEGG   Gasterosteus aculeatus (three-spined stickleback): 120820555
Entry
120820555         CDS       T07457                                 
Symbol
cfap43
Name
(RefSeq) cilia- and flagella-associated protein 43 isoform X1
  KO
K24223  cilia- and flagella-associated protein 43
Organism
gat  Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:gat00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:gat03037]
    120820555 (cfap43)
Cilium and associated proteins [BR:gat03037]
 Motile cilia and associated proteins
  Tether/Tether head (T/TH) complex
   120820555 (cfap43)
SSDB
Motif
Pfam: CC_Cfap43 Beta-prop_THOC3 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR5 Beta-prop_ACSF4 WDR55 Beta-prop_EML WD40 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_Prp19 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_Aladin Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd CFAP43_N Beta-prop_HPS5 ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_VPS8 Beta-prop_WDR75_1st
Other DBs
NCBI-GeneID: 120820555
NCBI-ProteinID: XP_040034406
LinkDB
Position
VI:12521520..12536092
AA seq 1649 aa
MDGIGSFDVRWIRGFTNKSIEFVDKKTVCYKCGDNICFLDLETKKQNMFQSPGKGIGALT
VNGNNQTFAFSEEKLSPSIFVYIYPELQLKNELKGSAQLDFTSLSLSTDGPYLACCSSLP
DHTITVWNWESAAPICTKPHAGRDVISLVFNPLSWFQLCALGKSSLTVWNIEKSANIHLL
KPSVIELPANDGSFVERLVPTSQTVTEILPYFGLEMPPSAISGLVGEKAESILTKLCAKA
RLTPSTICWTPTSELYVGCVEGFLLLVDPESLSVSVIFNPTTADAIPELRNNNFQSLSLN
QNGFIAVGKDNTVHCVQVKAAQITITQTWQLEEPVTTAMYSPDRETLLFSSIAGQIYALN
PTRSGVIVKLLDILSGDFVAAALSHTDKTICVSVRDSGVLQLWSAEGICLGSLSLQAEVT
SLACCPIAQYAAVGTASGNVLFIDLNWEQQPRLVHRVHLHHSPVDHLVFDQEGHYLLTGA
SDSYIYVLDAKPSKMFSVIGYTVVHGPILSLSVQCIKDSAQVKVLAQYSGQQLTVLSLPT
GDLSGPDCVDRHGCLSTLVLKASTYEVPDPLNSCVLGVSKVFAYCQKRRTLQRFELPQNT
DGLSSEQVVQLKPEQEVRGHPVGPASLFISPHGLWLASAGRDGLLLIRETASMERHIERQ
CHSCRLGGVRSASFSADSQTVLTAGLKDCSLVCTDIRINSMGADKMKEATRYSQSMKHLL
KKIFNAENPVLIDLPEWGQAPPAGTVTPEESEVSGGGHSVDVTEQDESYNSLPSAPPSHP
TWLESRREAIIKEDNEQYSETKKNLKKSIIELRHNIQEMMRENELLPGIERLEQEEFNLD
VEDQRSLGAMVEQEVTRVRNEIELEILAKRYLRDVLRRECWESLKVKGKAIKAFHSEQQV
KNYPLKEQTDKEVEDLRRVHNMRNIEKAASTVSSTGPQQSKLNKNSKGEEGPEAESAAVT
GSFSSELVGSNPYIYDQFCLQTTEQKINQIILLQDVIRCIKTAFNSDFEAVYKQKVQELN
RVKDRNRHITEIMLELDVREKLWEPGLTVSEQPERLLTVDDSEIKAEKYLSPEQQKEEER
KKLEEQKCLGAKGDTVRDRALDDMMNGVIEVKKDGILKMKIPPPGFVLTKPDKDWSEEEK
KVYKEYEKKSTDLSEEKEKYKKSIETEMRKLQASSIDATERFDETLTKLFEKKVKCEMAI
YQEELKVTYLVYSVLEEDEIRNRDLELKLKLEKTLAFKEEIRREVKRHEEELEFFQESYE
STVAEDKVLDKDFRKEFFNVQSHLVDSLYKLFRSRPRVQKMRTQTDSSSVLFKEQRLCGS
QAPDALSKMLKAMEDLDAPENIPVGVSPQIWERFCLVRRVKVESEQKVKVKALTLAEMHA
FLQKRRAEDSAAQQEIKILLDELESLHRDKNRYLKDIMVQVLLKQGQVEVSTTGLTADYT
DSVLSNRSEVENLNRTIRTLGEQKIATMVECKDFRKGIIKLQWEHRMKGMQIEHLNTKAR
DIQMLRLSEEQQDYLNKTGRDSRVSKQVSILEKTLAFQEKAHLKSVKQRMKKIEQLNRQA
AEKAKENATVKQQLPDMQVTVAERTHIYEAIASQDNQAAKTEERYQEILLRSNLEACARA
QAEELASLWAEVERLRMKNFPSLDQLKHD
NT seq 4950 nt   +upstreamnt  +downstreamnt
atggatggcattggaagtttcgatgtcaggtggatacgaggttttacaaacaagagtatc
gagtttgttgacaaaaaaacagtatgttacaaatgtggggataatatctgtttcctcgac
ctggagacaaaaaagcaaaatatgtttcagagtcctggaaaaggaattggtgcattgaca
gtcaatggcaacaatcaaacgtttgctttctccgaggagaagctatccccgtcaatattt
gtgtatatttaccctgagttacagttaaagaatgaactaaaaggctcagcacaacttgat
ttcacatctctctcgttaagcactgatggtccttatctggcctgttgttcgtctctgccc
gatcacaccataacagtgtggaactgggaaagcgcggcgccaatttgtacaaaaccgcac
gccgggcgggatgtcatttctttggtgttcaaccctctcagttggttccagctctgtgct
ttgggcaagagctccctcactgtctggaatattgaaaagagtgccaacattcatctactg
aaaccaagtgtgatagagcttccagcaaatgacggttcgtttgttgagagattggtgccc
acctctcaaactgtcaccgaaatactcccctacttcggtctcgagatgcctccatcagcc
atctcaggactcgtgggagagaaggcagaaagcattctgactaaactctgcgccaaagcc
cgactaactcctagtaccatctgctggacacccacttccgagctttatgtgggctgtgtg
gaaggctttctgctccttgtcgatccagagagcctctctgtctcagtcatctttaacccc
acaactgctgatgccatccctgaacttagaaacaacaactttcaaagtttatcccttaac
cagaatggtttcattgccgtaggaaaggacaatacggtgcactgcgtgcaagtcaaagcg
gctcagatcaccatcacacaaacgtggcaattagaagaacctgtcacaacagcgatgtac
tcgcctgaccgcgaaacattacttttttcatctattgcgggtcaaatctacgcgttgaac
ccgacccggtctggcgtcattgtgaagctcctggatattctcagcggcgactttgtggct
gcagctttgtcgcacaccgacaaaaccatctgtgtgtcggtgagggattctggagtactg
cagctgtggtctgcagagggcatttgtcttggttccctgtctcttcaagctgaggtgaca
agtctggcctgctgtcctattgcacaatacgcagctgttggaacggcttcgggaaatgtc
ctcttcattgacctgaactgggagcagcaacctcgcctggtgcaccgggttcatctacac
cacagtcctgtggatcaccttgtttttgaccaagaggggcactaccttctcacaggtgca
tcagattcatatatctatgtactagatgcaaagccatcaaagatgttttccgtcatagga
tacacagtggttcacggacccattttgtcgctttccgttcagtgcatcaaggacagcgca
caggtgaaggttcttgcacagtactctggacagcagctcacagtgctctctttgcctacc
ggagacctttcaggtccggattgtgtagaccgacatggttgtctgtctactctcgtcctt
aaagcgtccacatacgaagttcctgatccacttaattcctgtgtcctgggagtcagcaaa
gtctttgcctactgccaaaagaggagaacccttcagcgatttgagcttcctcagaacaca
gacggtctctccagtgaacaggtggtccagctcaaaccagagcaggaagtgaggggtcac
cctgtgggccctgcctctctctttatctctcctcatgggttatggcttgcttctgcgggc
cgagacggcctcctactcatccgagaaaccgcttccatggagcggcacattgaacggcaa
tgtcattcatgccgcttgggtggagtccggagcgcgtccttttctgcagacagccagaca
gtcctcaccgctggcttgaaagattgctctcttgtgtgcaccgatatcagaattaacagc
atgggtgctgataagatgaaggaagctaccaggtacagtcagtctatgaagcatttattg
aagaagatattcaatgctgagaatcccgtcctcattgatttgcctgagtggggtcaagct
cctcctgctggcacagtaacaccagaggaaagtgaggtcagtggtggagggcattctgtg
gacgtgacggagcaggatgagagttataacagcctgccgtctgcaccaccttcacacccg
acctggctggaaagcaggcgagaagcgattataaaagaagacaatgaacaatattccgag
acaaagaaaaacctgaagaaatccatcatagagttacgtcacaatatccaggagatgatg
cgcgaaaatgagctcctcccaggtattgagcgtctggaacaagaagagttcaacctggat
gttgaggatcagaggagtctgggggcgatggtggagcaggaggtcactcgggtgagaaat
gaaattgaattggagattttagcaaaacgttacctcagggacgttctgagaagagaatgc
tgggagtcgttgaaggtcaaaggcaaggccatcaaggcctttcattcagaacaacaggtg
aagaactatcctctgaaagaacaaacagacaaagaggtggaggaccttcgccgggtccac
aacatgaggaacattgaaaaggctgcttcaaccgtgagctcaactggtccacagcaaagc
aagctaaataaaaattccaaaggcgaggaaggcccggaggctgagagtgctgccgtaacg
ggaagtttctcctctgagttagtaggttccaatccttacatttacgatcagttctgcctg
caaaccacagagcagaagatcaaccagatcattctgctacaggatgtgattcgttgcatc
aagacagcgttcaacagtgactttgaggccgtgtacaagcagaaggtgcaggagctgaac
cgggtgaaggacaggaacagacacatcacggagatcatgctggagctggacgtgagggag
aagctgtgggagcccggcctgaccgtcagcgagcaaccagagaggctgctcactgtggac
gactctgagataaaagcagaaaagtacctcagcccagaacaacaaaaggaggaggagagg
aagaagttggaagagcagaagtgtttgggtgccaaaggggatactgtcagagacagggct
cttgatgacatgatgaatggagtgattgaagtgaaaaaagacggaatcttaaaaatgaaa
atccctccgcctgggtttgttttgaccaaacctgacaaggattggagcgaggaggagaaa
aaggtctataaagagtacgaaaaaaaatccacagacctcagcgaggagaaggagaaatac
aaaaagtccatcgaaactgaaatgagaaaactacaggcatccagcattgatgctaccgag
aggtttgatgagactttgacaaagctgtttgagaagaaagtgaaatgtgaaatggcaatt
tatcaggaagagctcaaggttacttatcttgtatattcagtcctcgaagaagacgagatt
agaaatcgagacctggagctcaagctcaaacttgaaaaaacgttggcattcaaggaggag
attagacgggaggtaaagagacacgaggaagaacttgaattcttccaagagtcctatgaa
agcaccgtagctgaggacaaagttcttgacaaagacttcaggaaggagttctttaatgtg
caaagtcatctggtcgatagcctttataagttattcaggagtagacccagggttcagaaa
atgaggacccagacggacagcagctccgtcctgttcaaagagcagcgcctgtgcggttct
caggctcccgatgctctgagcaaaatgctgaaggccatggaggatctcgacgctccggag
aacataccagtaggagtcagcccacaaatctgggagaggttctgtctcgtccgccgcgta
aaagtagagagtgagcaaaaggtaaaagttaaagctctgactcttgctgagatgcacgcg
ttccttcagaagaggagagcggaggacagcgccgctcagcaggaaataaaaattctcctc
gatgaacttgaaagtctgcatagagataagaaccgttacctgaaggacatcatggtccaa
gtcctgctcaaacagggccaggtggaggtttctaccacaggcctgactgccgattacacc
gactcggtactttccaacaggagcgaggtggagaacctcaacagaaccatccggacgctg
ggggagcagaagatagccaccatggtggagtgcaaagacttccgtaagggcatcatcaag
ctgcagtgggagcacaggatgaaggggatgcagatcgagcacctcaataccaaggcgagg
gacatccagatgttacgactctctgaggagcaacaggattacctcaacaagacgggtcga
gacagccgggtgtccaagcaagtttctatcctggagaaaactttagcttttcaggaaaag
gctcatctaaaaagtgtgaagcagcgcatgaaaaagattgaacagctcaacaggcaggcg
gcagagaaagccaaggagaacgcaactgttaaacagcagctgcccgatatgcaggtgact
gtggcagagaggacgcacatctatgaagccatagcttcacaggataatcaagcagctaag
acagaggagcgctaccaggaaatccttctgaggagtaacctggaggcctgtgccagagcg
caggcggaagagctggcttccctctgggccgaagtcgagcgcctgaggatgaagaacttt
ccgtcactggatcagctgaaacacgactga

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