Gasterosteus aculeatus (three-spined stickleback): 120820622
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Entry
120820622 CDS
T07457
Name
(RefSeq) LOW QUALITY PROTEIN: vinculin-like
KO
K05700
vinculin
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04510
Focal adhesion
gat04517
IgSF CAM signaling
gat04518
Integrin signaling
gat04519
Cadherin signaling
gat04520
Adherens junction
gat04810
Regulation of actin cytoskeleton
gat04820
Cytoskeleton in muscle cells
gat05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120820622
04518 Integrin signaling
120820622
04519 Cadherin signaling
120820622
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120820622
04520 Adherens junction
120820622
09142 Cell motility
04820 Cytoskeleton in muscle cells
120820622
04810 Regulation of actin cytoskeleton
120820622
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
120820622
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gat04812
]
120820622
04147 Exosome [BR:
gat04147
]
120820622
Cytoskeleton proteins [BR:
gat04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
120820622
Exosome [BR:
gat04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120820622
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
Mob_Pre
DASH_Spc34
STX6_10_61_N
NEMO
Motif
Other DBs
NCBI-GeneID:
120820622
NCBI-ProteinID:
XP_040034527
LinkDB
All DBs
Position
6:complement(9540016..9568936)
Genome browser
AA seq
1125 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTVPVAAVQAAVSNLVRVGKE
TVQTTEDQVMKRDMPPAFIKVENSSSKLVQAAQMLKADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLAVAEVVETMEDLITYTKNLRPGMTKMSKMIEERQQ
ELTHQEHRQMLVNSMNTVKELLPVLVSAIKIFVATKSSRGAGVEDAERNRKFIFEKMSAE
INEIIRVLQLTTWDEDAWANKDMEAVKRCLALIESKMAQAKGWLKDSHGQPGDPGEVALR
VILDEAGKVGELCAGKERKDILATTKALGQMTDQIADLRARGQGSNPGCVQRAGQCSQGL
DLLFGKVDGAARRLEALINAKQAVARRLDAAQAWLADPHGGPEGEENIRALLAEAKRIAD
LCEDPKERDDILRSIGEIAALTARLVELRRQGKGDSPEARALAKQIGGALLTLQSKTNRA
VANMRPTKPAVTLEGKMDQALRWVNNPGVDDRGVGQAAIRGMVGEGRRLAGGLLGPYRQD
MIGRCDRTEALMTSLADMAGRGETEAPHARATAAQLQDSLKDLRQHMQEVMTKEVSDVFS
DTTTPIKLLAVAATAPPDAPNRGEVFEERAGNFEAHAGRLGATAEKAAAVGTANKSTVEG
IHASVKSARELTPQVTSAARILLKNPGNKAAYEHFDTMKNQWIDNVEKLTGLVDEAIDTK
SLLDASEEAIKKDIDKCRVAMANVQPQMLVAGATSIARRANRVLLVAKREVENSEDPRFR
DTVKHASDLLSHTISPMVMDAKAVAGNIQDKALQKVYLDSCLRILAAVGKVREAFQPQEP
DFPPPPPDLDQLHVNDEQAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVLSEPMMV
AARQLHDEARKWSSKPEDEEAVEEREVDDEDEFTDGEDDYEPELLMMPSNQPVNQPMLAA
AQALHQEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGNKRALIQCAKDIAKASDEV
TRLAKEVAKQCTDRRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISEEESEQATD
MLVHNAQNLMQSVKETVREAEAASIKIRTDAGCTLRWVRKTPWYQ
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgtttcacaccaagaccatcgagagcatcctggagccggtggcccagcagatc
tcccacttggtcatcatgcacgaagagggggaggtggacggcaaagccatcccggatctg
acggtgcccgtggccgctgtgcaggcggcggtcagcaacctcgtgcgggtgggcaaggag
accgttcaaaccaccgaggaccaggtgatgaagagagacatgcctcctgcattcattaag
gtggagaattcaagctctaaactcgtccaggcagctcagatgctgaaggctgatccatac
tctgttcctgcacgagattacctgatcgatggatccagagggatactatctggaacatct
gacctgctcctcacctttgatgaagcagaggtgcgtaagatcattcgtgtgtgtaaaggc
atcctggagtacctggcagtggctgaggtggtggagaccatggaggaccttatcacttac
accaagaacctgaggccagggatgactaaaatgtcaaagatgattgaggagaggcagcag
gagctgacgcaccaagagcacaggcagatgctcgtcaactccatgaacaccgtcaaagag
ctgctgccggttcttgtatcagcgataaagatttttgtcgcaaccaagagcagtcgaggt
gccggcgttgaggatgcagagaggaacaggaagtttatctttgaaaagatgagcgctgaa
atcaacgagatcatcagagtgttacagctcaccacgtgggatgaagatgcctgggccaat
aaggatatggaggctgtaaagagatgcttggctttgattgagtctaagatggcacaagct
aaaggctggctgaaggactcccatggacaaccaggggaccccggcgaggtggccctgcgc
gtgatacttgatgaagccggtaaggtgggagagctgtgtgccgggaaggaaaggaaagac
attctggcaacaactaaggctctgggacaaatgacggaccagattgccgacctacgtgca
agaggccagggctccaacccggggtgtgtgcagcgcgcaggccagtgctcacagggctta
gacttgctgtttggcaaagtggacggtgctgctcgcagattggaggctctaatcaacgcc
aagcaggccgtcgctcggaggctcgacgccgcacaggcctggctggctgatcctcacggc
ggtccggagggagaggagaacattagagcgctactggcagaggccaagcgcatcgccgac
ttatgtgaagaccccaaggagagggatgacatcctgcgctccatcggagagatcgcggcc
ctcaccgccagacttgtggagctgcgcagacagggtaaaggtgacagcccagaagctcgc
gctttggcaaagcagattggaggggcactgttgaccctgcagtccaaaacaaaccgggcc
gtggccaacatgagaccaacaaaacccgccgtgactttggagggcaagatggatcaggcc
ctccgctgggtgaacaaccccggagtggacgacagaggagtaggtcaggcggcaatcaga
gggatggttggagaaggaaggaggctggcaggaggcctgttaggcccgtaccggcaggac
atgattggacgctgcgaccgaacagaggctctcatgacatcattggcagacatggccggc
aggggcgagactgaagcccctcacgctcgagctacagctgcacaactgcaggacagcctg
aaggacctgaggcagcacatgcaggaggtgatgaccaaggaagtatcggacgttttcagt
gacaccactacgcctatcaaactgctggctgtggctgcaactgctccacccgacgccccc
aacagaggggaggtttttgaagagcgtgcagggaacttcgaggcccacgctggtcgactg
ggggcgactgcagagaaggctgctgccgtgggaacggccaacaaaagtactgtagaggga
atacatgccagcgtgaaaagtgccagggagctcacgccacaggtgacctctgctgctcgg
atcttgttgaagaatcctggaaataaagcagcatacgagcactttgacaccatgaagaac
cagtggattgacaatgtggaaaaactcactggtctggtggatgaagccatcgacaccaaa
tctctgttagatgcctccgaggaggctataaagaaggacatcgacaagtgccgggtcgcc
atggcaaacgttcagccccagatgcttgttgccggggcaacgagcatcgcaagacgcgcc
aatcgggtcctgttggtggctaagagggaagtggagaactctgaagatccgcggttcaga
gacacggtaaaacatgcgtcagacctcctctcccacaccatctcacccatggtgatggac
gccaaagcagtggctgggaacatacaggacaaagctctgcaaaaggtctatttggactcg
tgtctgaggatcctggccgcagtcggcaaagtaagagaagccttccaacctcaggagccg
gacttccctcctccaccaccggacctggaccagctccatgtcaacgacgagcaggctcca
cccaagccccccttaccagagggcgaggtgcccccacctcgtccccctcctccagaggag
aaggacgaggagttcccagagcagaaggcgggagaggtgctcagcgagcccatgatggta
gcggccaggcagctgcacgatgaggcgcgcaagtggtcgagcaagccagaggatgaggag
gcagtagaagagagagaggtagatgatgaagatgagtttactgatggtgaggatgactat
gagccggaactgctgatgatgccctccaaccagcctgtcaatcaacccatgcttgcagct
gcccaggctctccaccaggaggcgcgcaaatggtccagcaagggtaacgacatcatagca
gcagccaagcggatggctctgctgatggcagaaatgtctcggctggttcgtgggggaagc
gggaacaagcgagcgctgattcagtgtgctaaggacatcgccaaggcctcagatgaggtg
acgagactggccaaagaagttgccaagcagtgcaccgatagacgcatcagaaccaacctc
ctgcaggtgtgtgaacgaatccctaccatcagtactcagctgaaaatcctctctactgtc
aaagccaccatgctgggacgaacaaacattagtgaagaagagtcagagcaggctacggac
atgttggtccataacgcccagaatctgatgcagtcagtgaaggagaccgtcagagaagca
gaagcagcctcaatcaagatccgaacggatgcaggctgcacccttcgctgggtgcgtaag
actccctggtaccaataa
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