Gasterosteus aculeatus (three-spined stickleback): 120820683
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Entry
120820683 CDS
T07457
Symbol
cdh5
Name
(RefSeq) cadherin-5
KO
K06533
cadherin 5, type 2, VE-cadherin
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04514
Cell adhesion molecules
gat04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120820683 (cdh5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
120820683 (cdh5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gat04515
]
120820683 (cdh5)
04090 CD molecules [BR:
gat04090
]
120820683 (cdh5)
Cell adhesion molecules [BR:
gat04515
]
Cadherins
Major cadherins
120820683 (cdh5)
CD molecules [BR:
gat04090
]
Proteins
120820683 (cdh5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
MG1
Nse5
PCC_BT
Motif
Other DBs
NCBI-GeneID:
120820683
NCBI-ProteinID:
XP_040034669
UniProt:
G3PDV1
LinkDB
All DBs
Position
VI:17777642..17801941
Genome browser
AA seq
775 aa
AA seq
DB search
MMARLLLWTLGLMAIMSVALAVAVDFVLPVAEGHHEIVKKESHPILSRQKRDWIWNALYV
EEEKPAPVAYRIGKLKSSKTVDVKKFEISGEGANRIFFVDSKGDLFVNQTLDREKNSMYK
LTAKMFDGNGELIEDSGDFVVQVTDINDNIPVFPRTYNGSIMERSPIGTEVVEVKATDAD
DNTTANGDLRYSLTQREDFAAFDIDSIKGVISSRTNTLDRETKSQYVVVVKAQDMRGMPS
GSTSTTSVTITVGDTNDNHASFTQRTYELNVREDHKLNEKIGTLQVDDRDEIRNKVPVFS
IPDKKTPWIFGVEVSKPNKDGDLVLKQALDYETMSSYTFNVKLHESLDVTDVVNSATTTA
RVTINVLDVDEAPVFNKPVYTFDVAEERDVRYIGAVSARDPDKAKKRIEYSILDPNCPIR
IHQETGQLSTRRKLDRELEAKHVVEVRAREGSDGLESSVKVEITVLDINDNKPELIVDDI
FVCENDPTGTVIGTLRAADKDDQPASFSFSVQSSNFSVRSRGNGTSDLTVKQGPFSLDDP
ADYSVDVHISDGGQPAQTSVTKLAIKSCRCDARRIPTQCKAGARRMGVSVHALIAILLCI
LTILVIVILFVMRKRYQKDSLSNLKNSGEIHEQLVTYDEEGGGEMDTNGYDVSILSSACQ
GGSLLRHPDQPHPSLYAMVQKPHHHAPPTARKGDMAVMIEVKKDEADHDRDGFPYDTLHI
YGYEGPESLAGSLSSLGSSSTGSNLDYDFLNEWGPRFRTLAELYGVDAPDYYHQY
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgatggctcggctcctgctgtggactcttgggctcatggcaattatgtccgtggctctc
gctgttgctgtagattttgtccttcccgtggcggaaggccaccatgagatcgtgaagaag
gagtctcatcctatcctctccaggcagaagagggattggatctggaacgctctctacgtg
gaagaggagaaaccggcacccgtcgcctacaggatcggaaagctgaagtcgagcaagact
gtggatgtgaagaagtttgaaataagtggcgaaggagcaaacaggatcttcttcgtggat
tccaaaggagacctgtttgtcaaccaaactctggatcgagagaagaacagcatgtacaaa
ctaactgccaaaatgtttgatgggaacggcgagttaatagaggattctggagactttgtt
gtccaggtgacagatatcaatgacaacatcccagttttcccccgaacatacaatggatcc
attatggagcggtccccgataggcactgaagtagttgaggtgaaggcaaccgatgcggat
gacaacactacggccaacggagacctccgatactctctgacccaacgcgaagactttgcc
gccttcgatatcgacagcatcaaaggtgtgatcagctccaggacgaatactctggaccgg
gaaaccaagagccagtatgtagtggtggttaaagcccaggacatgagaggaatgccctct
ggcagcacatccaccacctccgtcaccatcaccgtcggagacaccaacgacaaccatgct
tctttcacccaaaggacgtatgagctgaacgttcgggaggaccacaagttgaacgagaag
ataggcactctgcaggtggacgacagggatgagattcggaacaaagtgcctgtcttctcc
attccagataaaaaaacaccttggatcttcggcgttgaagtcagcaagcccaacaaagat
ggtgacctcgtgctcaaacaggctctggactacgagacaatgagcagctacaccttcaac
gtcaagctgcatgaaagcctggatgtcacggacgtggtgaacagcgccaccaccaccgcc
agggtgaccatcaacgtgctggacgtagacgaggcgccggtgttcaacaagcccgtctac
accttcgacgtggcggaggagcgcgacgtgagatacataggagccgtctcggccagggac
cccgacaaggccaaaaagaggatcgaatactccatcttagaccccaactgccccatccgc
atccaccaggaaaccggtcagctgtccacccgcaggaagctggaccgagagctggaggcc
aaacacgtggtcgaagttagagcgcgggagggctccgacggtttggagtcttcagtgaaa
gtggaaatcacggttctggacatcaacgacaacaagcccgagctgattgtggacgacatc
ttcgtgtgtgagaacgaccccactggcacggtgatcggaaccctgcgagccgcagacaaa
gacgaccagccggcctccttcagcttcagcgtgcagagctccaacttctccgtcaggagc
cgcggcaacggcacgtccgacctcacggtgaaacaaggcccgttcagcctggacgacccg
gcggattacagcgtggacgtgcacatcagcgacggcgggcagcccgcccagaccagcgtc
accaagctggcaatcaagtcgtgtcggtgtgacgcccggcggattcccacgcagtgcaaa
gccggcgcccggaggatgggagtgagcgtgcacgccctgatagccatcctgctctgcata
ctgaccatactggtcatcgtgatcctgtttgtgatgaggaaacgctaccagaaggactcc
ctctccaacctgaagaacagcggcgagattcacgagcagctggtcacgtacgacgaggag
ggaggaggagagatggacactaacggctacgacgtctccatcctctcctccgcctgccag
ggcggctccctgctccgtcacccggaccagccccacccgtctctctacgccatggtgcag
aagccccaccaccacgcgccgcccaccgcccgcaagggcgacatggccgtgatgatcgag
gtgaagaaggacgaggcggatcacgaccgcgacggcttcccgtacgacaccctgcacatc
tacggctacgagggccccgagtctttggccgggagcctcagctctctggggagctcctcc
acgggctccaacctggactacgacttcctcaacgagtggggcccgaggttcaggaccctg
gccgagctgtacggcgtggatgcccccgactactaccatcagtactga
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