Gasterosteus aculeatus (three-spined stickleback): 120820859
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Entry
120820859 CDS
T07457
Symbol
zc3h13
Name
(RefSeq) zinc finger CCCH domain-containing protein 13
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120820859 (zc3h13)
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
120820859 (zc3h13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH
zf-CCCH_DUS3L
zf-CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
120820859
NCBI-ProteinID:
XP_040035007
LinkDB
All DBs
Position
1:complement(22402895..22413266)
Genome browser
AA seq
1846 aa
AA seq
DB search
MSKIRRKVTVENSKTISDSSSSSSTTTSSTSNPAAPSRRPSVFERLGPSTGSNAADSHCR
NWLKTGNCSYGNTCRYTHGTQPRGKGFSFSRSAERPTGDLRERMKNKRQDVDPENLKRDL
DEPASPTARQRDSSRGRHREKEDIKITKERTPASEEEPTEWETNREDSDIGDYDYELSLE
MKRQKIQRELMKLEQENLDKREEIIIKKDETPAKTRAQAMPKASPELLSKQDSPSSRKST
GSPKHKSGNKGPGSGKKEKKAVVPSPVSESTRPSKGSHSKKKGPRTPSPPPPVPLDIPVV
GKKHKGKHKNKEKSEEKQKEAKDRGRDIEKHKEKKEKRRDRSDSSHKAKRSMTSEERSGS
VSSPSRGTTPTARKKSTSPKALSHKTPVLVSPPRRSPTPPRHQRTPTPPRHKRTPTPPRH
HSPSSNSGSSAQRNSSSPRRRRSSSPAYHRSAVVLTSASSPPSSRRSRSPPASHSASSPH
RRSDRSSPGQRHSRGRERSRGERERSPPAQERRHERRDESRSKREKDDRDYEPEQVSSRD
ARDDRETREARERRDARSRGRDTARETRDHRDSRDVKDTRESRAETRSSRESLERRDRER
ERDREKERDKDREREKERERTDNHRKEEPAQEDRSYGRGHGREDGGRAEGRTENRIDRTE
RNSRGRGRANETSDKGSNRNSRGSQLESGHDNWESRSSGVRERSVERSTDRNRYEGDRRG
EARDSSYDRRGGHGERDRRDNRERGGDQRAASPVRHQGRSDESEREDRREDRRADRPEDR
RDDRTRDREREREKEKEREREKEREKEVERERVREREREREREREREREREREREERERE
REERERERERKEREREREREREREQREQRERERQREWEERERGREERRERRDDTRDDRTV
RDDRKTSRKRPRVESSPSPRASPKRAARDVSPADSDGYNSAEEKSADKNRLLSQVVRPQE
PPLRSPPRAAASDEKPAHWKDDERRGAGDKREARGRHEDPEPRGERSRGGDRRGEPVADG
PSDSRGRGCRDQRESTPPLLPSALAAASEDRDTVGSQSHEEGKKKKSQRKVLKKVRKEDE
VGGGGNIPGGAGERFKPEPPAGGAAEAPPPVHSPKKGARKKALDRKRKRSREGESDVSDE
DLSAPQPQNKRKRGPRTPPPSMRPDPRAAVGNMEPSPLPKMDNFSDWSDEEVTDRAAPLE
TQTPPAEPLKRGAGPRVGRDRERCHPPAIAPLLPQDPPMLLPTLTPQPLMSQPLLRKLPP
EQARSSSMGSNQSRTSSRRLRSPSNESAHRDDPQGPRARRGRLQGANSRDRERERERPVV
GEPPVVERKSRIDQLRRAEPSRSTSSDRQDSRSHSSRRSSPDSERPARSGSRAGSYDSRE
RERDREPFERERDRKDLRPQQPQQQPPPTQPQQQQQQPPPAQQLHQQQQPLLLQQPLQLQ
RDWEPEPRDWPSRGREPLLMRPGREPLLRERDIRDRERLLPEGLIQQHERERERERERER
DVRGGGGDRERMMMMDLLPHGDLRLAGRGDLRGDLRGDLRGDLRGDLRGDLRGDLRGDMR
GEMIRQERSDFEPRECAYVPREVFSSLELEKPINSHHLMGDQREQEKTDSIDGDDDGKED
ESVTSVGEEYEPISDDELDEILADSQKKEDQQDDEKITGPLDVIDVDWSSLMPKTKQEPR
AAGAALLRFTPGAVLLRAGISRRLAGPELMEQVREVCKSELDDPKDADKLFEHDLGALNM
AALNRRVERAGLLRNLGPCCKALCARRDFAIRRQLLKNDKGLTKQYPATPVVDNELLQMS
MRLFRRTMAGQAAGPERSDAGSVPAAEVAPAGGSKLGTAQPEVCVS
NT seq
5541 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagatcaggcggaaggtaacagtggagaattcaaaaaccatatctgatagcagc
agcagcagcagcaccacgaccagcagcaccagtaaccccgccgccccatcccgccggccc
agtgtgtttgaaagacttggccccagcactgggagtaatgctgctgatagtcactgcaga
aattggctgaagaccggtaattgcagttacggcaacacttgtcgctacacacatggaact
cagccacgaggcaaaggatttagcttcagccggtcagctgagagacctacaggtgatctg
cgggagaggatgaagaataaaagacaggatgttgacccagaaaacttgaagcgtgaccta
gacgagcccgcatcccccacagctagacagagagactcctccagaggccgacacagggaa
aaggaggatataaagatcacaaaggagcgcaccccagccagtgaagaagagcccacagag
tgggaaaccaatcgcgaagactccgatatcggtgactacgactacgagttatccctcgag
atgaagcgccagaagattcagcgcgagctgatgaaattggagcaggagaacttggacaag
agggaggaaattatcattaagaaagatgagacgcccgcaaaaacaagagcacaagccatg
ccaaaggcctccccagagctgctaagcaagcaagactcgccctcatcccggaagtcaact
ggatccccaaaacacaaaagtggaaacaaaggaccaggctctggaaagaaggagaagaag
gccgtagtgccctcaccagtttctgaatctaccaggccttcaaaagggagccacagtaag
aagaaagggccccggacccccagtccccctcccccggtccctctagatattcctgttgtt
ggtaaaaaacacaaaggaaagcacaagaacaaggagaagtctgaggagaagcagaaggag
gcaaaggatcgagggagagatattgaaaaacacaaagagaaaaaggagaaacgcagggac
aggtcagacagttcccacaaggccaagcgctcaatgacatcagaggagcgttctggcagt
gtgtcctctccctccaggggcactacacccacggccaggaagaagtccacctctccgaaa
gctttgtcccacaagacccccgtgctggtctcccctcctcgcaggtctcccactcctcca
cgccaccagcgcacccccactcctccacgccacaagcgcacccccactcctccacgccac
cattcgccctcctccaactctggttcctcggcccagcggaactcttcgtctcctcgccgc
cgccgctcgtcctcccccgcctaccaccggagcgcggtggtcctgacgtccgcctcctcc
cctccgagctcccggcggtcccggtcccctcccgcttcccacagcgcctcctctccccac
cgccggtccgaccgatcgagccccggccagcgccactccaggggccgcgagaggagccgc
ggggaaagagagaggagtccgcctgctcaggagcgcaggcatgagcgcagagatgaaagc
cgcagcaagcgagagaaagatgatcgggactacgagcccgaacaggtctcgtcgcgggac
gcccgcgatgatcgggagaccagagaggcccgcgagcgacgggacgctcgctcgcgaggc
agggatacggcccgagagacccgtgaccatcgagacagccgggacgtgaaggacaccaga
gaaagccgagcggagacccgctccagccgagagtcgctggagcgccgcgaccgcgaacga
gagagggaccgcgagaaggagagggacaaagacagagagcgagaaaaggagagggagagg
actgacaaccaccggaaggaggaaccggctcaggaggacaggagttatggccgaggtcac
ggacgggaggatgggggcagagctgaaggaaggacggagaacaggatagacaggaccgag
aggaacagccgagggagagggcgagccaatgaaacgtctgacaaaggctcaaacaggaac
tcccggggttcccaactggagagcggccatgacaactgggagtcccggagcagcggcgtg
cgtgagcggagtgtggagaggagcaccgatcgcaatcgctacgagggggacaggagagga
gaggccagagactcctcgtacgacaggagaggagggcacggagagcgggatcggagagac
aaccgagaaagaggcggagatcaaagagcagcctctcccgtcagacaccaggggagatca
gatgagtctgagagggaggaccggagggaggaccgcagggcagatagaccagaggacaga
agagacgacaggacccgtgaccgagagagggagagggagaaagagaaggagagggagagg
gaaaaggagcgagagaaggaggtggagagggagcgtgtcagggagagggaacgggaacga
gaaagggagagagagcgcgagagggagagggaacgggagcgggaggagcgcgaacgggag
agggaggaacgggagcgggagagggagaggaaagagcgagagagagaaagggagcgcgag
agagagagggagcaacgggagcagcgggagagggagaggcagcgggaatgggaggagcgg
gagagagggcgagaggaaaggcgggaaaggagagacgacaccagggacgaccgcaccgtc
agagacgaccgcaaaacgagtcgcaagcggcccagggtggagagcagcccgagccccaga
gcctcgccgaagcgagcggcccgcgacgtcagccccgcggacagcgacggctacaacagc
gcggaagaaaaaagtgctgacaagaaccgcttgctgagccaggtggtgcggccccaggag
ccgccgctgcgctccccgccgagggccgccgcgtccgacgagaagcccgcccactggaag
gacgacgagcgcagaggagccggggacaaaagggaagcacgcggccgccacgaggacccg
gagcctcgcggggagcgcagcagagggggcgacaggcggggagagcccgtcgcggatggc
ccgtccgactcccgcggccgaggctgcagggaccagcgagagtccacgccgccactcctt
ccctcggccctcgccgcggccagcgaagacagagacacagtcggctcccaatcccatgag
gagggtaaaaagaaaaagtcacagaggaaggtgctgaagaaggttcgcaaggaggatgag
gtcggcggcggcggcaacattccgggaggtgcgggagagcgtttcaagccagagccccca
gccggcggcgccgccgaggcgcctccacccgtacactcgcccaagaaaggagccaggaag
aaggcgcttgatcggaagaggaaacgctcacgagagggggaatcagacgtgtcggatgag
gatctgtctgcccctcagccgcagaacaagaggaagcgagggcccaggacgccgccgccg
tcgatgaggcccgatccccgtgctgccgtgggcaacatggagccatctcctcttcccaaa
atggacaactttagcgactggtcagatgaggaggtcacggacagagcggcaccgctggag
acacaaactcctccggctgagccccttaagagaggcgctggtcccagagtgggcagggac
agggagcggtgtcaccctcctgccatcgctcccctgctcccccaagatcccccgatgctg
ctgcccactctgaccccgcagcccctcatgtcgcagccgctgctccgcaagcttcccccg
gagcaggcgcgcagcagcagcatggggagcaaccagagccgcacgtcgtccagacgcctg
cgatctccctccaacgagtcggcccaccgagacgacccccagggtccacgcgcccgccgg
ggtcggctgcagggcgccaactctcgggaccgagagagggaaagggagaggccggttgtg
ggcgaacctccggtggtcgagaggaagtcccgaattgaccagctgaggagagcggagccc
agtcgcagcacctcgtcagaccgccaggactcgcgcagccacagctccaggcgcagctcc
cccgactcagagaggccggccaggtcgggatcccgcgccggctcctacgacagtcgagag
cgggagagagacagggagccgtttgagcgggaacgagaccgaaaagacctccggcctcag
cagccgcagcaacaacccccgcccacgcagccacagcagcagcagcagcaaccaccacca
gcacaacaactacaccaacagcagcagcccctgctcctccagcagccccttcaactgcag
agagactgggagcccgaacccagggactggcccagcagaggacgggagccccttcttatg
cgtcctggccgggaacctctcctgagggagcgggacatcagggacagggaacgcctgctc
cccgaaggactcatccagcaacacgagcgagagagggagagggagcgggagagggagaga
gatgttagaggcggcggcggtgatcgggagaggatgatgatgatggacctcctgccacac
ggggacctcaggctcgcagggcggggagacctgcggggagacctgcggggagacctgcgg
ggagacctgcggggagacctgcggggagacctgcggggagacctgcggggagacatgcgg
ggggagatgataagacaagagaggagcgactttgagccaagagaatgtgcctatgtgcca
agagaagtcttcagctctttagagttggagaaacccatcaacagtcaccatctaatggga
gatcagagggagcaggagaagacggacagcattgatggagacgatgacgggaaagaagac
gagtcagtcacctccgtgggagaggagtatgaaccaatcagtgatgacgagctggatgaa
atactggctgacagccagaaaaaagaggatcagcaggacgacgaaaaaattacaggtcct
ctggatgtcatcgacgtggactggtccagcctgatgcccaaaacgaagcaggagccccgg
gcggcgggggcagcactgctccggttcactccgggggccgtgcttctgagggcgggaatc
tctaggcgcctcgctgggcccgagctgatggagcaggtcagagaggtgtgcaagtccgag
ctggacgaccccaaagatgccgacaagctgtttgagcatgacctgggggctctgaacatg
gccgctctgaataggcgggtggagagggcgggtctgctgagaaacctcgggccctgctgc
aaggccctgtgtgctcggagggacttcgccatccgccggcagctgttaaaaaacgacaag
ggcctaaccaagcagtaccccgccacgcccgtggtggacaacgagctgctgcagatgagc
atgcgtctattcagaaggaccatggcgggccaggccgcgggcccagagcggtccgacgcc
ggctccgtgccggcggccgaggtcgctcccgccggtggtagtaagctcggcacggcacag
cccgaggtgtgtgtgtcctga
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integrated database retrieval system
