Gasterosteus aculeatus (three-spined stickleback): 120820865
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Entry
120820865 CDS
T07457
Symbol
mlh1
Name
(RefSeq) DNA mismatch repair protein Mlh1
KO
K08734
DNA mismatch repair protein MLH1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03430
Mismatch repair
gat03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
120820865 (mlh1)
03460 Fanconi anemia pathway
120820865 (mlh1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gat03400
]
120820865 (mlh1)
DNA repair and recombination proteins [BR:
gat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
120820865 (mlh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
120820865
NCBI-ProteinID:
XP_040034983
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All DBs
Position
6:3003778..3009134
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AA seq
718 aa
AA seq
DB search
MAGVIRRLDETVVNRIAAGEVIQRPANAVKEMIENCLDAKSTNIQVTVKDGGLKLLQIQD
NGTGIRREDMDIVCERFTTSKLQTFEDLSAIATYGFRGEALASVSHVAHVTITTKTADAK
CAHRASYSDGKLKAPPKACAGNQGTQILVEDLFYNVSTRRKALKSPSDEYSRIVEVVSRY
AIHNSGKSFSVKKQGETVADVRTLPNASVVDNIRGVFGNAVSRELIQVGCEDQKLAYKMK
GYISNANYSVKKCILVLFINHRLVESSALKKAIETVYAAYLPKNSHPFLYLSLEIAPQNV
DVNVHPTKHEVHFLHEDSVIESVQKHVESKLLGSNSSRTYFTQTLLPGLSGGGEVKSPGG
GGEPGERVYAHQMVRTDCRAQKLDAFLRPKETAPRDPDAAGPSGGEAARTGGAEMDESDD
ADMLAALAEQEAERPKGNQGDAQRKRPRKAQQTEEEVHEDLTAAATPKRRVIKLTSIKEL
RAEVTENAHKGLQEMLQNHSFVGCVDPQWTLIQHHTKLYLLNTTRLSQELFYQILIYDFG
NFGVLRLSTPAPLYDLAMLALDSEESGWTEEDGPKEGLAQYIVDFLKKKTEMLEDYFSIE
IDQDGNLTGLPLLLDAYTPIMEGLPMLILRMATEVNWDNEKDCFRELSKECSMFFSIRRR
YVLEAEQDAEGNSWRWKLEHVICKALRSLLSPPKSFSEDGTVLQIANLPDLYKVFERC
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggccggagtcatccggaggctcgacgagactgttgtcaaccggatcgctgcaggagag
gtcatccagcgcccggccaacgccgtcaaagaaatgattgaaaactgtttggacgccaag
tccaccaacatccaggtgacggtgaaagacggcggactgaagctgctccagatccaggac
aacggaactggcatccggagagaagatatggacattgtttgtgagaggtttaccaccagc
aagctccagacgtttgaggacctctcagctattgcgacctacggattcagaggagaggcc
cttgctagtgtgagccatgttgcccatgtgaccataacgactaaaacagccgacgcaaag
tgcgcccacagagcgagctacagcgacggcaaactgaaagcgccccccaaagcatgtgcc
ggcaaccagggaacccagatcctcgtggaggacctcttctacaatgtgtccaccaggcgg
aaagccttaaagagccccagtgatgagtactccaggattgtagaagtggtcagcaggtac
gccatacataattcagggaaaagtttttcggtcaaaaagcaaggagagaccgtggcggac
gtgaggactcttcccaacgcctccgtagtagataatattcggggagtttttggaaatgca
gtcagcagggagctgatccaggtcggctgcgaggatcagaagcttgcttacaagatgaag
ggctacatctccaacgcaaattactccgtaaagaaatgcatcctggtgctcttcatcaac
catcgcctggtggagtcgagtgcactgaagaaggcaatcgagacggtttacgccgcgtac
ctccccaagaactcgcacccttttctgtacctcagtttggagatcgcgccgcagaacgtc
gacgtcaacgtccatcccacaaaacacgaggtgcacttcttgcacgaagacagtgtcatt
gagagcgtccagaagcacgtggagagcaagctgcttggctccaactcctcacgcacgtac
ttcactcagacgttgctgccgggtctgtcaggtggcggcgaggtcaagtcccccggcggc
ggcggcgagcccggtgagcgagtctacgcacaccagatggtgaggaccgactgtcgcgcg
cagaagctggacgccttcctccggccgaaggagacggcgccgcgcgaccccgacgcagcc
gggcccagcggcggtgaggcggcccggaccggcggcgcggagatggacgagtcggacgac
gcggacatgctggcggccctggccgagcaggaagcggagcggccaaagggtaaccagggc
gacgctcaaaggaagcgacccaggaaagcgcagcagacggaggaagaagtccacgaggac
ctgacagctgctgccacgcccaagagacgggtcataaaactgaccagcatcaaagagctc
cgagcggaggtcaccgagaacgcacacaaagggcttcaagaaatgctgcagaaccactcg
ttcgtgggctgcgtggacccacagtggaccctgatccagcatcacaccaaactgtacctg
ctgaacaccactaggctcagccaggagctcttctaccaaatactcatctacgactttggg
aacttcggcgtactgcggctgtcgacaccagcgccgctttatgacctcgccatgctggct
ctggactctgaggagagcggctggaccgaagaggacggtcctaaagaaggcctggcccag
tacatagtggacttcctgaagaaaaaaacggagatgctcgaggactatttctccatagag
atagaccaggacgggaacctaacggggcttccgttactgctcgacgcgtacacgccgatc
atggagggtctccccatgctcatcctgcgcatggccaccgaggtgaactgggacaatgaa
aaagattgcttcagagaattaagcaaggagtgcagcatgttcttttccatcaggaggcgc
tacgttcttgaggcggagcaggatgccgaggggaactcgtggcgctggaagctcgagcac
gtcatttgcaaagctttgcgaagcctcttgagtccgccgaaaagcttcagcgaggacggc
accgtgctgcagatcgccaacttacccgatctctacaaagtgttcgagaggtgctga
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