Gasterosteus aculeatus (three-spined stickleback): 120820871
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Entry
120820871 CDS
T07457
Name
(RefSeq) LOW QUALITY PROTEIN: girdin-like
KO
K25392
girdin
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gat03037
]
120820871
Cilium and associated proteins [BR:
gat03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
120820871
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HOOK_N
HOOK
KASH_CCD
CCDC110
DUF4472
GAS
SerH
PRR11_2nd
Motif
Other DBs
NCBI-GeneID:
120820871
NCBI-ProteinID:
XP_040035017
LinkDB
All DBs
Position
6:15377267..15427542
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AA seq
2018 aa
AA seq
DB search
MESEVFTPLLEQFMLTPLVCWVKTAGQASLTDGSPLSEYIELVDGIYLNEIMLEINPKAT
VQRTNKKVNNDPTLRIQNLSILIRQVKGYYQETLQQLVMMPLPNVLVLGRNPLSEQGLEE
MKKLLLLLLGCAVQCEKKEEYIEGIQTLDFDSKAAIASHIQEVTHNQENVVDLQWLESGE
MPAEDLDSLSRNLAFHLKRLVDDRDTQLETIVELTQERDCVQLSPLAPCSTQSPGDSPSM
RRTESRQHLSVELADAKAKIRRLRQELEEKSEQLLDTRQELENMEVELRRLQQESYQLVS
DARSARAYRDELDALREKAIRVDKLESELSRYKERLHDIEFYKARVEELKEDNQVLLETK
SMLEEQLDATRTRSDKLHLLEKESLQLKSKIHDLEMERDMDRKRMEEILEENLVLEMAQK
QSMDESLHLGWELEQLAKTPELTEAPQKSLGEEVNELTSSRLLKLEKDNQTLMKTVEELR
GAASHDTVTKLSKVNLENQRLNQKLEQLGSELTADRESLLSAESLSTDLMKEKALLEKTL
ETLRENSERQLKGLEQENKHLSQTVSSLRQRCQVGAEARVKDVEKENRVLHESICETTAK
LNKIEFERKQLRKELEVVKEKGERAEELEVQNQKLERVNESLQKKVSSLGITCEKVSSLE
KENSDLEAEGRRLKKKLDTLKNMTFQLEALEKENSQLEKENLELRRLAESLRSAGAKAAQ
LEAENRELESERSHLKRSMELLKASSKKTERLEVSYQGLDTENQRLQKALENNSKKIQQL
EEELQEVETENQSLQRNLEELKISSKRLEQLEQENKILEQESSQLEKDKKLLEKENKRLR
QQAEIRDSKLDDDNQRISCLEKENRTMGKEMIFFRDSCTRVKDLERENKELVKLGTIDKK
TLSTLREELVSEKLRTQQLNNDLDKLTHELEKIGLNKERLLHDESSDDRFKLLETKLEST
LKSSLEIKEEKIAALEARLQESSNLNQQLRQELKTVKKNYEALRQREEEERMVLSSPPRG
SDDPQAVSKWENESHEATRELLKVKDRLIEVERNNATLQAEKAALRSQLKQLETQSANLQ
AQIVAVQRQTASLQENNTSLQTQNAKLQVENSTVSSKSAALMAQNAQLQSQQSSVEGERE
GALKDKEELRSTYELLLRDHEKLAALHERQAVEYEALIGKHGGLKTSHKGLEQQHRDLED
KYKQLTQRKGELEDLEKHLKEQQEKMALENQTHRATADQYQLLKEDHDRLNNTYRQLVKD
NDNLQLDHKNVKTQLNGAKLDQTKLEAEFSKLKEQYQQLDITSTKLTNQCELLSQLKGNL
EEENRHLLDQIQTLMLQNRTLLEQTMESKDLFHVEQRQYIDKLNELRRQKEKLEEKIMDQ
YKFYDPSPPRRRGNWITLKMRKLIKPKSRERMRSLTLTPSRSESGDGFLTFPQDSQDSSS
IGSGSNSLDDTLTQKKSSRRRGQQPPAQVQGSTNALKRLPFMRNRSKDKDKAKAIYRRSM
SMNDLLQTMAVAGDPDGQWASSIDNLDGAEAGDAVVAASRGRSGRRMKDLAFSTNAIDCA
ALTLPTPGHRRAKLRLQVKDNASCEDVTGSFDDPKSHACRPTSLHSNRTISSNSNNNSHL
TSPLEGKGALNGSLSRPHSESSGEFSLSLDPEVWSSSGSSPVQQPTSSRSSHQSPLQLRR
TLDPSAAAGCAGPTQAAKAGSPVKEVLSLQQFLDEGIDPAEVKKHSQRNLSADTPCLSLL
SLAERTHKDPMSTVXPSARRAAPVASDRLPRAAGQPGRPTLRKAESTRVRGSVPARSGLS
SQSKATSVSGRLDLASSTLPRASSVISTAEGTTRRTSIHDLLSKDHRPPVSVDAAPPPPA
AKAGVRSQPTASEYRADLKGPLTAATPLPKSLSLPCRSSEDPDLSTLESFLGPSFTVESV
FMDSIFSESLGKNHPFLSLNPTLVSNISGPPVTSKTHPPPPPIPNHTPTQNQDPFSQSNG
PAGLKESSGGADPSCVNKEDESLSPEDKQSLWYEYGCV
NT seq
6057 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcgaggttttcacccctctgctggagcagttcatgctcacgcctctggtgtgc
tgggtgaagacagccggccaggcctccttgaccgatggctccccactatcggaatacatt
gaattagtggatgggatttacctgaacgagatcatgctggagataaatcctaaggccact
gtgcagaggaccaacaagaaggtgaacaatgacccgacactgcgcatccagaacctctct
attctcatcaggcaggttaaaggctactaccaggagaccctccagcagctggtgatgatg
cctttaccgaacgttctcgtactcggacgcaaccctctgtctgagcaaggtctggaggag
atgaaaaaactgttgctgctgctactcggatgcgcggtccagtgcgagaagaaggaggaa
tacattgagggcatccagactctggactttgactccaaagctgccatagcatcccacatc
caagaggtgactcataatcaggagaacgtagtggacctgcagtggctggaaagtggggaa
atgcctgccgaggacctggacagcctctccagaaacctggctttccacctcaagcgcctg
gtggacgacagggacacgcagctggagacgatagtggagttgactcaggagagagactgt
gtgcagctgtccccactggctccctgttccacccagtctcccggagactcccccagtatg
aggaggaccgaaagccgccagcacctctccgtggagttggccgatgccaaggccaagatc
cgacgccttcgacaggaactagaggagaagagcgagcagcttttggacacccggcaggag
ctggagaacatggaagtggagctcaggaggcttcagcaagagagctaccagttggtgtcg
gacgctcgatcggcgcgggcctaccgcgacgagctggacgcgctccgagagaaagcgatc
cgcgtggacaaactggagagcgagctgagccgatacaaggagagactccacgacatcgag
ttctacaaggcccgggtcgaggagctgaaagaggacaaccaggtcctgttggagaccaag
agcatgttggaggagcagctggatgcgacccggacccgctccgacaaactgcaccttctg
gagaaagagagtctccagctcaaatccaagatccacgacctggagatggagcgggacatg
gaccgtaaacgtatggaggagatcttggaggagaaccttgtgcttgagatggcccagaaa
cagagcatggacgagtccctgcacctgggctgggaactggagcaactggccaagacacca
gaactgaccgaagcccctcagaagtcgttgggcgaggaggtgaatgagctgacctccagc
cgtctgttgaagctggagaaggacaaccagaccctgatgaagactgtggaggagctcaga
ggagcagccagtcatgacactgtgaccaaactatcaaaagtcaacctggaaaaccagaga
ctgaaccagaaattggagcagttggggagcgaactgacagcagacagagagtcgctcctg
agcgccgaatcactcagtactgacctgatgaaggagaaggctctactggagaagactctg
gaaacactccgagaaaactcagaaagacagctgaagggactggagcaggagaacaagcac
ctgagccagacagtgtcgtctctgcgccagcgctgccaggtcggagctgaggcccgggtc
aaggacgtggagaaagagaatcgcgttctccacgagtccatctgcgagacaaccgccaaa
ctcaataagatcgagtttgagaggaaacagcttcgcaaggagcttgaagtggtgaaggag
aaaggcgagcgggctgaagagttggaggtccagaatcagaagctggaaagggtcaacgag
agcctgcagaagaaagtatccagtctaggaatcacctgtgaaaaggtgtcttctttggag
aaggagaactccgatctggaggcagaaggccgccgtctgaagaagaagctggacactctg
aagaacatgaccttccagttggaggctctggagaaggagaactcccagctggagaaggaa
aacctggaactccggcgcttggccgagagcctccggtcggcgggcgctaaggccgctcaa
ctggaggccgagaacagggagctggagagcgagaggagccatttgaagcgcagcatggaa
ctgctcaaagcctcgtccaaaaagacggagagattagaggtgagttaccagggcctagat
acagagaaccagcgcctgcagaaggcgttagagaacaacagcaaaaagattcaacagttg
gaggaagagctgcaagaggtggaaactgagaaccaaagcctccaacgcaacctggaagag
ctcaagatctccagtaaacgcctggagcagctggaacaagagaacaagattcttgagcag
gaaagctcccagctagagaaagacaagaagctcctggagaaggagaacaagcggctgagg
cagcaggccgagatccgcgactccaagctggatgacgacaaccagcggatctcctgcttg
gagaaagagaatcggaccatgggcaaagagatgatcttcttcagggactcctgcacaaga
gtcaaggacctggagagagagaacaaggagctggtcaaactgggcaccattgataagaag
acgctcagcacactcagagaggagcttgtgagtgagaagctgcggacccagcagttgaat
aacgatctggacaaactgacccacgagttggagaagattggactgaacaaagagaggctg
ctgcacgacgagagctctgacgacaggttcaagctcctggagaccaaactggagtcgact
ctgaaatcgtctttggagattaaagaggagaagatcgccgccctggaggcccgactgcag
gagtcctctaacctcaaccagcaactgcgccaggagctcaagacggtgaagaaaaactac
gaagcgctgcgccaaagggaggaggaggagaggatggtgctgagctcgccccctagaggt
tcggatgaccctcaggctgtcagtaaatgggagaacgagagtcatgaagccaccagagaa
ctgctgaaagtcaaagacagactcatcgaggtggagaggaataatgccacgctgcaagct
gagaaggcggccctgaggagtcagctcaaacaactggaaactcaaagcgccaacctgcag
gctcagattgtggccgtgcagagacagacggcctctctgcaggagaacaacacgtctctt
caaacgcagaacgccaagctgcaggtggagaactccaccgtgagctcaaagagcgcggcc
ctcatggcccagaacgcccagctgcagagccagcagagcagcgtggagggtgagcgcgag
ggagcgctgaaggacaaagaggagctgaggtccacctacgagctgctcctgcgcgatcac
gagaagctggcggcgctccacgagaggcaggcggtcgagtatgaagccctgatcggaaag
cacgggggcctgaagacctcccacaagggcctggagcagcagcacagggacctggaggac
aagtacaagcagctcacgcagaggaagggagaactggaggatctggagaaacatctgaag
gagcagcaggaaaagatggcgctagagaatcaaacacaccgagccacagctgatcagtac
caactgctcaaagaagatcatgatcggctgaataatacctatcgtcagctggtgaaagac
aacgacaatctccaactggaccataagaatgtgaagactcagctgaacggcgccaagctg
gaccagaccaagctggaggctgaattctctaaactgaaggagcagtaccagcagctggac
atcacctcaaccaagctcaccaatcagtgcgagttgttgagccagctcaaaggaaaccta
gaggaggagaatcgccaccttttggaccagatccagactctgatgctgcagaatcgcact
ctgttggagcagaccatggagagcaaggacctgttccacgtcgagcaaagacaatacata
gacaagctgaatgagctgaggagacagaaggagaagctggaggagaagatcatggaccag
tacaagttttacgacccctcacctccacgcaggcgtggcaactggatcactttgaagatg
aggaagttgatcaagccgaagagccgggagaggatgcgctctctcacgctgacgccctct
cgttcagagtccggcgacggtttcctgacgttcccccaggacagccaggacagctcgtcc
atcggctctgggtccaactcgctggacgacacgctgacacaaaagaagagcagcaggagg
agagggcagcagccccctgcccaggtgcagggttccaccaatgctttaaaaaggttgcct
ttcatgaggaacagatccaaggacaaagacaaggccaaggccatctaccggcgctccatg
tccatgaatgacctgctgcagaccatggcggtggcgggcgatcccgacggccaatgggcg
agcagcatcgacaacctggacggcgctgaggccggagacgccgtcgtggccgcgagcaga
gggcgcagcgggcggcgcatgaaggatctcgccttttccaccaacgccatcgactgtgcc
gccctcaccctgcccacgcccgggcatcgcagggccaagctccggctccaggtcaaagac
aacgcctcctgtgaagacgtgaccggctccttcgacgaccccaagagccacgcctgcaga
cccaccagtctccatagcaacaggaccatcagtagtaatagtaacaataactcccacctc
acttctcctctggagggcaaaggcgcgttgaacggcagcctcagccggcctcacagcgag
agcagcggagagttcagcctgagcttggacccggaggtgtggtccagcagcggcagcagc
cccgtgcagcagcccacctcctcgcgctcctcccaccagagccccctgcagctgcgcagg
acccttgacccgtctgcagccgcgggctgcgccggcccgacccaggcggcgaaagcggga
tccccggtgaaggaggtgctgtccctgcagcagttcctggatgagggcatcgatcctgca
gaggtgaaaaaacattcccagagaaacctcagcgccgacaccccttgcctctcacttctc
tctctagccgaaagaacacacaaagaccctatgagtactgttnttccttctgcgaggcgg
gcggcgccggtcgcctcggaccgccttccccgggccgccgggcaaccgggtcgccccacc
ctgcgcaaggcggagagcacccgcgtcaggggctcggtcccggcgcgctccggcctgtcg
tcccagagcaaagccacgtcggtgtcggggcgcctggacctggcctcctccacgctgccc
cgcgccagcagcgtcatctccaccgccgagggcaccacgcggcgcaccagcatccacgac
ctgctgtcaaaggaccaccggcccccggtgtccgtcgacgcggctcctccccctcccgcc
gccaaggccggggtgcgctcccagccgacagccagtgagtaccgcgccgacctaaaggga
ccccttaccgccgccacccccctgccaaagtcactcagcctgccctgccgtagctcggag
gatccagacctctccaccctggagtccttcctgggcccctccttcaccgtggagtccgtc
ttcatggactccatctttagtgagtcgctgggcaaaaaccaccccttcctgtctctgaac
cccaccctagtcagcaacatcagcgggcctcccgttacgagtaaaacgcacccccctcct
cctcccatccccaatcacacacccacccaaaaccaggaccctttcagccaatcaaacggc
ccggccggtctgaaagagtccagcgggggcgccgatccgagttgtgtgaataaggaggac
gagtccctgagcccagaggacaagcagtctctgtggtacgagtacggctgtgtgtga
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