Gasterosteus aculeatus (three-spined stickleback): 120820872
Help
Entry
120820872 CDS
T07457
Symbol
lrit1a
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1a
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gat04990
]
120820872 (lrit1a)
Domain-containing proteins not elsewhere classified [BR:
gat04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
120820872 (lrit1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
Ig_3
ig
LRR_1
fn3
Ig_2
LRR_5
C2-set_2
LRR_EndoS
Ig_6
C2-set_3
RNA_pol_Rpb1_2
Motif
Other DBs
NCBI-GeneID:
120820872
NCBI-ProteinID:
XP_040035019
UniProt:
G3P094
LinkDB
All DBs
Position
VI:11170928..11176885
Genome browser
AA seq
651 aa
AA seq
DB search
MFLVLLLGLYAATGELFSPVNSCPSQCSCFYHNLSDGSKARSVICNDPEISVVPVGFPFD
TSKLRIEKTAIQRIPSEAFNYLSNLEFLWMSFNTLSALSPDSFRELLNLEELRLDGNALT
AFPWECLMDMPSLRLLDLHNNQLPSLPAEATTYIKNLTYLDLSSNSLLTLPTEVLSTWLA
VKPVQGPESSKLILGLHDNPWVCDCRLYDLVQFQKSPTFSVAFIDTRLRCSEPESVSGVL
FTDAELRRCQLPRIHTAVARVRSAVGNNVLLRCGTIGVPIPDLSWRKADGQLLNGTVQQE
TSKEGITWSILRVPAVSYQDSGKYICKATNYAGNAEAVISLIVSNSPKSEGNQTSNDKKA
KVKKPNPVGKAAYQEKLVARYVVPTSTPPSLSALDPGLPPDLVADPRPASYSLADRATPG
PAAPSNPEALLDLEKTNLSNLAANTSSLQQDPDRLVRSVKVVGDTDDTIYLNWRAPKAKN
TTAFSVLYAVFGERDMRKINVGAGQNRVTINGLVPRTKYIACVCVRGLIPKKEQCVIFST
DEAASATGTQRLINVIVITVACIIAVPLTVIVCCGALKRRIQKYWGKKSKDIQDSYVTFE
TLSPATKAKGLEGEYLNRQNPEESNRLLSARSSLDSEATAKIEGQPNEYFC
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgttcctcgtcctgctcctggggctctacgcggctacaggtgaacttttctccccggtg
aactcgtgtccgtcacagtgcagctgtttttaccacaacttgagtgatggatcaaaggcc
aggagcgtgatttgcaatgatcccgagatatctgtggtgcctgtcgggtttccctttgac
acgtccaagctgcgcatcgagaagacggccatccagcggataccgagcgaagccttcaac
tacctctccaatctcgaattcctgtggatgtctttcaacaccctgtccgccttgagcccg
gacagtttccgggaactgcttaacctggaagagcttcgtctggacgggaatgccctcacc
gcctttccctgggaatgtctcatggatatgcccagtctcagacttctcgacttgcacaac
aatcagctcccctcgctgccagcggaggccacgacttacatcaaaaacctcacctacttg
gatctgtctagcaacagcttgctgaccctgccgacggaggtgctgtccacctggctggcg
gtgaaacctgtccaaggtccagagagctccaagctgatacttggtctccacgacaacccc
tgggtgtgcgactgccggctgtacgacctggtccagttccagaagtctccgactttttca
gttgcgtttattgacacgaggctgaggtgttcagaaccggaaagtgtatcaggggtgctg
ttcacagacgcagagctgcggcgctgtcagctcccacgtattcacacagccgtggctcga
gttcggagcgctgttgggaacaacgtgctgctccgctgtggcaccattggagtcccgatc
ccggacctgtcgtggcgcaaggcagatgggcaactccttaatggaacagtccagcaggaa
acatcaaaggagggaatcacctggtccatcctccgtgtcccggctgtgtcctaccaggac
tcagggaaatacatctgcaaggccactaactacgctgggaacgctgaagctgtcatttct
ctcattgtctctaactcaccaaaatcagaggggaaccaaacaagcaacgacaagaaagcc
aaagtgaagaaacccaacccggtggggaaagcggcctaccaggagaaactggtggcccga
tatgtggttccaacctccacccctccatcactctcagccctggatccaggccttccacct
gatctcgtcgctgaccctcgaccagccagctacagcctagctgacagagccaccccaggg
cccgccgccccttccaacccagaggcactgctggatctggagaagactaatctgagcaac
ctggcggccaacacgtcatcgctgcagcaggacccggaccggttggtccgctcagtaaag
gttgtgggggacacggacgatacaatttatttgaactggagagcccccaaggccaagaac
acgacagcatttagtgtgctgtacgccgtgtttggagaacgggacatgagaaagatcaat
gttggggcaggacagaaccgcgttaccatcaacgggctggtgcccaggaccaagtacatt
gcctgtgtgtgtgtgagggggctgatccccaagaaagagcagtgcgtcatattttccact
gatgaagcagccagcgcgaccggaacccagaggttgattaatgtgatcgtgatcaccgtg
gcctgtatcatcgcggtcccgctcactgtcatcgtgtgctgtggggctctgaagagacgc
attcagaagtactggggaaagaaatccaaggatatccaagattcctatgtgacctttgaa
acgctgtcacctgccacgaaggccaaagggctcgagggggagtatctgaacagacagaac
ccagaggagtccaacaggctgctgtcggctcgctccagcttggactctgaggcaacagct
aagatagagggacagcctaacgagtacttctgctga
DBGET
integrated database retrieval system
