Gasterosteus aculeatus (three-spined stickleback): 120820987
Help
Entry
120820987 CDS
T07457
Symbol
xpo1b
Name
(RefSeq) exportin-1 isoform X1
KO
K14290
exportin-1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03008
Ribosome biogenesis in eukaryotes
gat03013
Nucleocytoplasmic transport
gat03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120820987 (xpo1b)
03008 Ribosome biogenesis in eukaryotes
120820987 (xpo1b)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
120820987 (xpo1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120820987 (xpo1b)
03009 Ribosome biogenesis [BR:
gat03009
]
120820987 (xpo1b)
03016 Transfer RNA biogenesis [BR:
gat03016
]
120820987 (xpo1b)
03036 Chromosome and associated proteins [BR:
gat03036
]
120820987 (xpo1b)
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
120820987 (xpo1b)
Ribosome biogenesis [BR:
gat03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
120820987 (xpo1b)
Pre-60S particles
120820987 (xpo1b)
Transfer RNA biogenesis [BR:
gat03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
120820987 (xpo1b)
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
120820987 (xpo1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
TPR_TNPO3_IPO13_2nd
mTOR_dom
BspA_v
Motif
Other DBs
NCBI-GeneID:
120820987
NCBI-ProteinID:
XP_040035231
LinkDB
All DBs
Position
6:5137161..5160856
Genome browser
AA seq
1074 aa
AA seq
DB search
MPAIMTMLADHAAQQLLDFNQKLDINLLDNVVNCLYHGVGPQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDASSV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVSQYEEQFVTLFTLTMCQLKQMLPL
NTNIRLAYANGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRLNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGNQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFI
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQTNGKGGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFV
PPLLDAVLIDYQRNVPAAREPEVLSTMATIVNKLGAHITSEIPQIFDAVFECTLNMINKN
FEEFPEHRTHFFYLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQIL
YTLLQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGK
ITTVLNPSSPTTNQGFIQEYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRD
FLVQIKEFAGEDTSDLFLEEREASLRQAQEEKHKIQMSVPGILNPHEIPEEMCD
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaattatgacaatgttagcagaccatgcagctcagcagctgctggacttcaac
cagaaactggatatcaacctgctggataatgtggtgaactgtctatatcacggggtggga
ccacagcaaagaatggcacaagaagtgttgactcatttgaaagagcacccggacgcctgg
acgagagtggacaccatcctggagttctcccagaacatgaacaccaaatactatgctctt
cagattctggaaacggttatcaaaacaagatggaagattctcccccggaatcagtgtgaa
ggtataaaaaagtatgttgtcggtctgattatcaagacttcatcagatgcttcaagtgtg
gagaaagaaaaggtgtacatcggaaagctgaatatgatcctcgttcagatcctcaagcag
gagtggccgaagcactggcccaccttcatcagcgacattgtcggggcgagtcgcaccagc
gagagcctttgtcagaacaacatgatcatcctcaagctgctcagcgaggaggtctttgat
ttctccagtggccagatgactcaggtcaaggccaagcacctaaaggacagcatgtgcaat
gaattctcccagattttccagctttgccagtttgtcatggaaaactcccagaatgccccc
ctggtccacgccactctggagaccctcctacgttttctcaactggattcctctggggtac
atctttgaaaccaaactgatcagcacattggtgtataagttcctgaacgttcccatgttt
cgcaacgtgacactgaagtgcctcacggagatcgccggcgtgagcgtcagccagtacgag
gagcagttcgtcacgcttttcacgctcaccatgtgtcaactcaaacagatgctgccgctg
aacaccaacatccggctggcctacgccaacgggaaggatgacgagcagaacttcatccag
aacctcagtctgttcctctgcactttcctcaaagagcacgggcagctcatcgagaagcgg
ctcaacctcagagaaaccttaatggaggccctccactacatgttgctagtgtccgaggtg
gaggagacggagatcttcaaaatttgtctcgagtattggaaccacttggccgctgagctc
tacagagagagccccttctctacgtccacgtccccgctgctctccggcaaccagcacttt
gacgttccaccacgcagacagctctacctgcccgtactctccaaggtgcgtctgctcatg
gtgagtcgcatggccaagccggaggaggtgctggtggtggagaacgaccagggagaggtg
gtcagagaattcatgaaggacacggactccatcaacctttacaagaacatgagggaaacc
ctcgtgtacctgactcacttggactacgcagacacggaacgcataatgacggaaaagctt
cacaaccaggtgaacgggaccgagtggtcctggaagaacctcaacacgttgtgctgggcc
atcggctccatcagcggggccatgcacgaagaggacgagaaaaggttcctcgtcaccgta
atcaaggatctgctgggtctgtgcgagcagaagagaggaaaggacaacaaggccatcata
gcctccaacatcatgtacatcgtcggccagtacccacgctttctcagagcccactggaag
ttcctcaaaaccgtcgtcaacaaactttttgagttcatgcacgagacacacgacggtgtt
caggacatggcctgcgacacgttcatcaagatcgcccagaagtgccggcgccacttcatc
caggtgcaggtgggcgaggtgatgcccttcatcgacgagatcctcaacaacatcaacaca
atcatctgtgaccttcaacctcagcaggtgcacacgttctatgaggcagtaggttatatg
attggcgcccagacggatcaggctgttcaagaacacttgatagaaaaatacatgctgctg
cccaaccaagtgtgggacagcatcatccagcaggccaccaagaacgtggacatcttgaag
gacccggagacggtgaaacagctgggcagcatcctgaagaccaatgtccgagcctgcaag
gccgtgggacaccccttcgtcatccagctgggccggatttacctcgacatgctcaacgtc
tacaagtgcctcagcgagaacatctctgctgccattcagacaaatggtaagggaggtgag
atggtgacgaagcagcccctgatccggagcatgagaacggtgaaacgagagacactgaag
ctgatttcaggctgggtcagccgatccaacgatccacagatggtcggagagaactttgtc
ccgcccctgctcgacgccgtcctcatcgactatcaacgcaatgtccccgctgcccgggag
cccgaggtcctcagcaccatggcgaccatcgtcaacaagctgggggcgcacatcaccagc
gagataccgcagatctttgatgccgtcttcgagtgcacactaaacatgatcaacaagaac
tttgaggagttcccagagcacaggactcacttcttctacttactgcaagcggtgaactct
cactgcttccccgcattcctcgccataccccccgcccagttcaaactggtgctggactcc
atcatctgggccttcaaacacactatgaggaatgtggctgatactggtctgcagatcctc
tacacgctgctgcagaacgtggcccaggaggaagcagccgcgcagagcttctaccagacg
tacttctgcgatatcctccaacacatcttctctgtggtcaccgacacgtcgcataccgcc
ggcctgacgatgcacgcgtccatcctggcctacatgttcaacctggtggaggagggaaag
atcaccacggtgctgaacccttccagccccaccaccaaccagggcttcatccaggagtac
gtggccaacctgctgaagacagccttcccccacctacaggatgctcaggtgaaggtgttt
gtgaccgggctgttcagcttgaaccaggatatcccggccttcaaggagcaccttagggac
ttcctcgtccagatcaaggagtttgcgggcgaggacacctccgacctgttcctggaggag
agggaggcgtcgctccgtcaggcccaggaagagaaacacaagatccagatgtccgtcccg
ggcatcctcaacccgcacgagatccccgaggagatgtgtgactga
DBGET
integrated database retrieval system
