Gasterosteus aculeatus (three-spined stickleback): 120821004
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Entry
120821004 CDS
T07457
Name
(RefSeq) LOW QUALITY PROTEIN: eukaryotic translation initiation factor 4 gamma 1-like
KO
K03260
translation initiation factor 4G
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120821004
03012 Translation factors [BR:
gat03012
]
120821004
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
120821004
mRNA cycle factors
Stress granule specific factors
120821004
Translation factors [BR:
gat03012
]
Eukaryotic type
Initiation factors
eIF-4
120821004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
W2
DDHD
Tet_JBP
EOS1
Motif
Other DBs
NCBI-GeneID:
120821004
NCBI-ProteinID:
XP_040035262
LinkDB
All DBs
Position
I:complement(1737532..1755541)
Genome browser
AA seq
1755 aa
AA seq
DB search
MTPAPQPRQYAPGPRPMHQQPFYTNRAGLPPSAGPRGVPPHSGPRPVTPTHVYQPGPGSQ
MMMIPGQQLPFQSSPQGPAYFIPGQYRSATYVATPQQYPVPAGTPGFYPGTSPADYGSYA
GAYYPAQPQFNPSLQPAPVIMSPAPQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
QQQQQQQQQALPQPPQHIATKRERKQIRIRDPNQGGRDITEEIMSGGRSGSTPTPPQSAI
SGSESAAVVQFNGESVPAAASPALVRPDERGKPTPPPSKTPELVKGDPVPTEASASDTNT
KPPAPPLLSEPQEVPVHTAPARAPVPDVMDAPRAPREAPPHPQSAPEVPAYPAPLPATIP
AAAQSKADKKTTEELKEVKKEEKAAAPPVAPPCAANGVAEVEHERPAAASPPPSCHLESP
PESPIAQPEELRLPNGLPLPAPRDPEVPAAGLDERDYSLIAXSGLGXETAGIGQPAPPSR
PEPAVVQEVPAHPVVPAEPPRPEVQDEVAPDITEETPVPAALAAATEEMQSPEETVPEET
VPAETVPAETVPEDTVPEETLPEETLPEETLPEETLPEETLPEETLPEETLAEETVPAVD
CAPERAPSPPSPTEEEREDTPPPQAVPPVLVEAAMQAAVSVPKKKRKMKDLNKKEAVGDL
LDAFKEEQVVAPPAPEPAAAAAPPATETRPPAPEEADLTWEDKEDKEGKADAENIQPDAD
KKYQYKEEQWKPIDPEQKKHYDREFLLGFQFSSASMSKPEGLPAISDVVLDKANKNPLRQ
LDPSRLMGMNCGPDFTPSFANLGRPGMGGGGGGGGGGSRGPPPGLGMGAGGPRRSQQMQR
KEPRKILTTMSLGDDVQLNKAEKAWKPTAKKPTRSRAAEEPEESESEDAKTQELFKRVRS
ILNKLTPQKFQQLMKQVSELTIDTEERLKGVIDLTFEKAISEPDFSVAYANMCRCLMGLK
VETSDKPGTFVNFRKLLLNRCQKEFEKDKDDDEIFERMQKELEAASVPEEKQKLTDELQS
AKDQARRRSLGNIKFIGELFKLKMLTEVIMHDCIVKLLKNHDAESLECLCRLLSTIGKDL
DFEKAKPRMDQYFHQMERIIKEKKTSSRIRFMLQDVLALRKNAWVSRRGDQGPKTIDQIH
KDAELEEHREQMKVQQALIFKKEPGGGGGGGGGGRMGGGGRGGGRNNPPQDEGWNTVPIS
KNRPIDTSRLSKITKTPVLDFNNQLLAPGGKGTWGSWGKGSSGGSSAKPAEAGSEAGGRP
ATSTVNRFSALQQSAPPSGSAQDADRRVPQRNSSSRERGDRFERRDDRDRNRLQVTKRSF
SRENSERSREREQRGSADPVRRVASMTDDRGSRDRARSKETVKQERAATPPPPQTPAKPA
LTEEELSKKSTAIIEEYLHINDMKEALQCVQEMNSTQLLSVFVRNGLESTLERSTIAREH
MGLLLQQLIKAGVLPTEQYYHGLQEILQVAEDMAIDIPHIWLYLAEQITPMLHEGGIPMG
ELFREVSKPLIPQGQAGVLLVQILSLLCKGMSHKKAGTMWREAGLRWKDFLPEDLDVDKF
VTEQNVEFTLCSESKEEQEEEEESQTKKKEELSPAELSRHLERLIQDQADNQRIFDWIEA
NLDEQQTSSNMFVRAVMTCVCQAAVVCENPNKVDGEQMKRRAKVLQRYLLDEQKELQALY
ALQALMVQMEQPANLLRMFFDTLYDEDVIKEEAFYQWEASKDPAEQQGKGVALKSVTAFF
TWLRNAEDEDEDDNS
NT seq
5268 nt
NT seq
+upstream
nt +downstream
nt
atgacccccgcgccgcagccccgacagtatgccccagggccgcggcctatgcaccaacag
cccttttacaccaacagggccggcctgccgcccagcgccgggccccggggcgtccctccc
cacagcggccctcggccggtgacgcccacccacgtctaccagccgggccccggctctcag
atgatgatgatccccgggcaacagttgcccttccagagctcgccgcagggacccgcctac
ttcataccgggacagtaccggtcggcgacctacgtggccacgcctcagcagtacccggtc
ccagcgggaacccccggcttctacccaggcaccagccccgcggactacggttcttatgca
ggggcctactaccccgcccagcctcagttcaacccctcactgcagccggcccccgtcata
atgagcccggcccctcagcagcagcaacagcagcaacaacagcagcaacagcaacagcag
cagcagcagcagcaacagcaacaacaacaacaacaacagcagcagcagcaacaacaacag
cagcaacagcaacagcagcaacaacaggcgctgcctcaacccccccaacacattgccacc
aagcgggaacgtaaacagatcagaataagggacccgaaccaaggaggtcgagacatcaca
gaggagattatgtcagggggccgcagcggctccacccccacgccaccacagtcggccatt
tcgggatcagaaagtgcggcggtggttcagttcaacggtgagagcgtcccagctgctgcc
tcgccggcgctggtcagaccggatgaaagagggaaacctacgccccctccgtcgaagacc
cctgaactggttaagggagaccccgtccccacggaggcctccgcctccgacacaaacact
aagccccctgccccccctctactatcagaaccgcaggaggtccctgtccacactgctccc
gctcgggctcctgttccggacgtgatggacgctccccgggctcccagggaagcccccccg
cacccccagtcggcgcctgaggtgcccgcttaccccgcacccctccccgcaaccatcccc
gctgccgcgcaaagcaaagcggacaagaaaaccacagaggagttgaaggaggttaaaaag
gaagaaaaggccgctgcccctcccgtcgcgcccccctgcgctgctaacggtgtcgccgag
gtggagcacgaaaggccggcggcggcatcgccgccaccctcctgtcacctcgagtccccc
ccggagtctccaatcgctcagccggaggagctccgcctccccaacggactgccgctgccg
gccccccgagaccccgaggtgcccgccgccggcctggatgaacgagactacagcctcatc
gcctagtcgggactcggctaggagacagctgggatcggccaacccgctcccccgagtcgc
cccgaacccgccgttgtccaggaggttcccgcccatccggtcgtcccggcagagcccccc
cggcctgaagtccaagacgaggtcgccccggacatcacagaagaaaccccagtgcccgct
gccctggcggcggccacggaagagatgcagtctcccgaggagacggttcccgaggagacg
gttcccgcggagacggttcccgcggagacggttcccgaggacactgttcccgaggagacg
cttcccgaggagacgcttcccgaggagacgcttcccgaggagacgcttcccgaggagacg
cttcccgaggagacgcttcccgaggagacgcttgccgaggagacggttcccgcagtcgac
tgcgccccggagagggcgcccagccctccctctcccacagaagaggagagggaggacacc
cctcccccccaggccgtcccacctgtcctggtagaagctgctatgcaagccgccgtctct
gtgccaaagaaaaaaaggaagatgaaggatctgaacaaaaaggaggcggtgggagacctc
ctggatgcctttaaagaggaacaagtggttgctccaccggcgcccgagccagccgccgcc
gccgcccccccggcaacagagacccggcctcccgcccccgaggaggctgacctgacctgg
gaggacaaggaggacaaggagggcaaggcggatgcggagaacattcagccggacgccgac
aagaagtaccagtacaaagaggaacaatggaagccaatcgacccggagcagaagaagcac
tacgaccgagagttcctcctgggcttccagttcagctcagccagcatgagcaagcccgag
ggcctcccggccatcagcgacgtcgtcctggacaaggctaataagaacccgctgcgtcaa
ctggaccccagtcgcctgatgggaatgaattgcggccccgacttcacgccctccttcgcc
aacctcggcaggcctggaatgggaggcggaggcggcggcggaggcggaggaagccgagga
ccgccgcctggtttgggcatgggcgccggcggcccgcgtcgctctcagcagatgcagcgc
aaggagccgaggaagatcctcaccaccatgtcgctgggcgacgacgtgcagctcaacaag
gcggagaaggcctggaagcccacggcgaagaagcccacccgctcccgcgcggccgaggag
cccgaggagagcgagtcggaggacgccaagacgcaggagctcttcaagcgggtccgcagc
atcctcaacaagctgacgccgcagaagtttcagcagctgatgaagcaggtgtcggagctg
accatcgacaccgaggagaggttgaaaggagtcatagatctgaccttcgagaaggccatc
tccgagcccgacttctcggtggcctacgccaacatgtgccgctgcctcatggggcttaaa
gtcgaaacctcggacaagccgggaacctttgtgaattttcgcaagctgctgctgaataga
tgccagaaggagtttgaaaaggacaaagacgacgacgagatcttcgagaggatgcagaaa
gagctggaagccgcttcagtgccggaggagaagcagaagctcaccgacgagctgcaaagc
gccaaagaccaggccaggaggcgctcgctgggcaacatcaagttcatcggagagctcttc
aagctcaagatgctcaccgaggtcatcatgcacgactgcatcgtgaagctgctcaagaac
cacgacgcagagtccctggagtgcctgtgtaggctgctgtccaccatcggcaaggacctc
gactttgagaaggccaagccccgcatggaccagtacttccatcagatggaaaggatcata
aaggagaagaagacctcgtccaggatccgcttcatgctgcaagatgtgctcgcccttcga
aagaacgcctgggtgtcccgacgaggcgaccagggccccaagaccatcgaccagatccac
aaagacgccgagctggaggagcaccgggagcagatgaaggtgcagcaagccctcatcttc
aaaaaggagccgggcggcggcggtggtggcggcggcggcggcaggatgggtggaggggga
cgcggggggggccgcaacaatcccccccaggacgaaggctggaatacggtgcccatctcc
aagaaccgacccatcgacacctctcgcctcagcaagatcacaaagactcccgttctcgac
ttcaacaatcagttgctcgctccaggtggtaaaggcacgtggggcagctgggggaagggc
agcagcggcggcagcagtgccaaacccgcagaagccggctcggaggccggaggccgtccc
gccaccagcaccgtcaaccgcttctccgccttacagcagtcggcgcccccctcgggctcc
gcccaggacgccgacaggcgagttcctcagaggaacagctcgagtcgagagcgcggcgac
cgcttcgaaaggcgggacgaccgcgaccgcaaccgactgcaggtcaccaagcgcagcttc
agccgggagaactcggagcggagccgggagcgcgagcagcgcgggtcggccgaccccgtc
cgccgggtcgccagcatgacggacgaccgcggcagccgcgaccgagcccggagcaaagag
accgtgaagcaggagagagctgccacccccccgccgccccagacccccgccaagcccgcc
ctgactgaggaggagctgagcaagaagtccacggccatcatcgaggagtacctccacatc
aacgacatgaaggaggctctgcagtgtgtgcaggagatgaacagcacccagctgctctct
gtgttcgtgcgaaacgggctggagtcgacgctggagcgcagcaccatcgccagggagcac
atggggctgctgctgcagcagctcatcaaggccggcgtcctcccgaccgagcagtactac
cacgggcttcaggaaatcctgcaggtggctgaagacatggcaatagacatcccgcacatc
tggctgtacctggcagaacagatcactcccatgctgcacgaaggaggcatccccatggga
gagcttttcagggaggtttcaaagcctttgatccctcagggtcaagcgggagttctgctg
gtccaaatcctctctttactctgcaaaggaatgagccataagaaggcgggcacgatgtgg
agggaggccggcctccggtggaaagacttcctccccgaggacctggacgtcgacaagttt
gtgacggaacagaacgtggagttcacgctgtgctcagagtctaaggaggagcaggaggaa
gaggaggagagccagacgaagaagaaggaggagctgagcccggccgagctgagcagacac
ctggagagactgatccaggaccaggccgacaaccagaggatctttgactggatcgaggcc
aacctggacgagcagcagacctcctccaacatgttcgtcagagccgtgatgacctgcgtc
tgccaggcggcggtcgtctgtgagaaccccaacaaggtggacggcgagcagatgaaacgt
cgggccaaggtgctgcagaggtacctgctggacgagcagaaggagctgcaggccctctac
gccctgcaggcgctgatggtgcagatggagcaacctgccaatctgctgcggatgttcttc
gacacgctgtacgacgaggacgtgatcaaggaggaggccttctaccagtgggaggcgagc
aaagaccccgccgagcagcaggggaagggcgtcgccctgaagtccgtcaccgccttcttc
acctggctccgcaacgccgaggacgaggacgaggacgacaacagctaa
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integrated database retrieval system
