Gasterosteus aculeatus (three-spined stickleback): 120821055
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Entry
120821055 CDS
T07457
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04080
Neuroactive ligand-receptor interaction
gat04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120821055
04082 Neuroactive ligand signaling
120821055
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gat04040
]
120821055
Ion channels [BR:
gat04040
]
Ligand-gated channels
GABA-A
120821055
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
DUF5874
Motif
Other DBs
NCBI-GeneID:
120821055
NCBI-ProteinID:
XP_040035367
UniProt:
A0AAQ4R0V1
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Position
1:24267398..24288150
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AA seq
483 aa
AA seq
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MLVMDLHSALNNKVSRISVMARLVLSLLLLCGCRNSRCLSSTAAQKEGAVQKEAAAQKEA
AAQKDDNSTVFTRILDGLLDGYDNRLRPGLGENVTEIKTDIFVTSFGPVSDTEMEYTIDV
FFRQSWKDERLCFKGPMEMLPLNNLLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLQED
GTLLYTMRLTISAECPMQLEDFPMDAHACPLKFGSYAYPVSEVVYTWTKEAAHSVVVAAD
GSRLNQYHLMGQNAGTENIHTSRGQYTVMMAHFYLKRKIGYFVIQTYMPCFMTVILSQVS
FWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEF
ATVNYFTKRSWAWDGKKALEAQHPKKRDPMVLSKKPNNVCSAGVNYTPNFTKDVSIATIS
NTTTVQLRAAETKMVDAKKTYNSVSKIDKMSRIVFPVLFGTFNLVYWATYLNREPVVKGV
TST
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgatggatctgcattcagctctgaacaacaaagtgagccgaatttccgtcatg
gcgaggctcgtcctttccctcctgctcctgtgcggatgccgaaatagtcgctgcctgtcc
tccacggcggcccagaaggagggagcggtccagaaggaggcggcggcccagaaggaggcg
gcggcccagaaggacgacaacagcacagtgttcaccaggatcctggacgggctcctggac
ggctacgacaaccggctccggccaggactcggagagaacgtgacggagatcaagacggat
atttttgtcaccagcttcggcccggtgtccgacacggagatggaatacaccatcgacgtc
ttcttccgccagagctggaaggacgagcgtctgtgcttcaaagggccgatggagatgctg
ccgctgaacaacctgctggcgagcaacatctggacccccgataccttcttcctcaacggc
aagaagtcgatcgcccacaacatgaccacgcccaacaagctgctgaggctgcaggaagac
ggcactttgctctacactatgagactgaccatatcagccgagtgcccgatgcagctggag
gacttccccatggacgcacacgcctgccctctcaagtttggcagctatgcctatccggtg
tcagaggtggtttacacttggactaaggaagctgctcattccgtggtggtggccgcggac
ggctccaggctcaaccagtaccatctcatggggcagaacgccggcacagagaacatacac
acaagcagagggcagtacacagtgatgatggcccacttctacctgaagaggaagattgga
tattttgtcatccagacctacatgccctgcttcatgactgtaatcctgtcccaggtgtca
ttttggctaaacagagaatcggttccggcgaggaccgtctttggggtgaccactgtgctg
accatgaccaccctcagcatcagtgccaggaactccctccctaaagtggcctacgccacg
gccatggattggttcattgccgtctgctacgccttcgtcttctccgccctcatcgagttc
gccactgtgaactacttcaccaagaggagctgggcctgggacggcaagaaggctctggag
gcccagcaccctaagaagcgagaccctatggtgctgtccaaaaagcccaacaacgtgtgc
tcggcgggcgtcaactacacacccaacttcaccaaggacgtgtccatcgccaccatctct
aacacgacgacggtgcagctccgggccgccgagaccaagatggtggacgcaaagaagacc
tacaacagcgtcagcaagatcgacaagatgtcgcggatagtgttccccgtcctgtttgga
accttcaaccttgtctactgggctacgtacctgaacagagaaccggtggtgaaaggagtg
acctcaacgtaa
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