Gasterosteus aculeatus (three-spined stickleback): 120821084
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Entry
120821084 CDS
T07457
Name
(RefSeq) protein NLRC3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
gat04054
]
120821084
Pattern recognition receptors [BR:
gat04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
120821084
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
NOD2_WH
PRY
SPRY
LRR_6
LRR_4
AFG1_ATPase
Motif
Other DBs
NCBI-GeneID:
120821084
NCBI-ProteinID:
XP_040035413
LinkDB
All DBs
Position
VI:18109265..18157204
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AA seq
1171 aa
AA seq
DB search
MNQGEDPEDGVRPSEPPLCGEHDRQTKAQRIHKRPGPGSGPEPSCVSMKSNWSMNPPLRF
KDEHGSYDPDSHPQRGKSPEPGCVSTKSNWSMNPPLRFKDEHRSYDPDSHQQSGSGPSCV
SMKSYQSKDLPINFKDGRPSYDPREDQESSDVPTGASSQQHQTHLDSIFMLLEENILTFV
KNELKKIQKVVSSDYPECLEKEDEEVLDEEQRRSREAFVKISVHFLRRMKQEELAERLQS
RLHAPVCQRELKSNLKKKFQCVFEGIAKAGNPTLLNEIYTELYITEGGTAEVNKEHEVRQ
IETASRRPARQETTIRQEDLLKASAGGEEPIRTVMTKGVAGIGKTVLTQKFTLDWAEDKD
HQDIQFTFPFTFRELNVLREKKFSLVGLVHHFFSETRAAGICRFEEFQVLLIFDGLDECR
LPLDFLNNEVLTDVTKSASVGVLLTNLIRGKLLPSARLWITTRPAAANQIPPECVGMVTE
VRGFTGPQKEEYFRKRFRDEEQASRIISHIKTSRSLHIMCHIPVFCWITATVLEEVLKTR
EGGELPTTLTEMYIHFLVVQSKVKKVKYDGGAETDPHWSPESRKMIESLGKLAFDQLQKG
NLIFYESDLTECRIDIRAASVYSGVFTQIFREESGLYQDKVFCFVHLSVQEFLAALHVHL
TFFSSGVNLLTEEQTTSRRSKRFRDKPKPMRLYQKAVDKALQSPNGHLDLFLRFLLGLSL
KINQTLLRGLLTQTGSHSQTNQRTVQYIKEKISKNVSPEKSINLFHCLNELNDASLVEKI
QQSLSSGRLSTEELSPAQWSALVFILLSSGEDLEVFDLNKYSASEEALLRLLPVVKASNK
VLLSGCNLSERSCDVLSSVLSSQSSSLRDLDLSNNHLQDSGVKILSAGLKSPHCDLETLR
LSGCLITEEGCSSLASALSSNPSHLRELDLSYNHPGDSGVTLLSAGLEDPHWRLETLRVE
PDGVRWLTPGLRKYSCELTIDTNTVNKQLKLSDNNRKVTCVEEDQSYPDHPDRFDIRAQL
LCRTGLTGRCYWEVEWRGDVTVSVSYRGIKRKGNSGDCLFGRSDQSWSLKCRHEGYSVCH
NKTETFITSSSSSSAGRVAVYVDCPAGSLSFYRVSSDTLIHLHTFSTTFTEPLYPGFWFR
SGSSVSLCSLQEGESPPAGEPSSLLTMRFSL
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagggtgaggacccagaggacggagtccgtccctctgaacctcctctgtgtgga
gaacatgacagacagaccaaagctcagaggatccataagagaccaggtcctggatctgga
cctgaacccagctgtgtgtccatgaagagtaactggtctatgaatcctcctttacgattc
aaagatgaacacggttcttatgacccagattcacatccgcagagaggaaagtctcctgaa
ccaggctgtgtgtccacgaagagtaactggtctatgaatcctcctttacgattcaaagat
gaacaccgttcttatgacccagattcacatcagcagagcggatctggacccagctgtgtg
tccatgaagagttatcagtctaaagatttgccgatcaacttcaaagatggacgcccttct
tatgacccacgagaggaccaggagagctcagatgttcccacaggtgcgtcttcccagcag
catcaaacacacctggactccatcttcatgctgctggaggagaacatcctcacttttgtg
aagaacgagctgaagaagatccagaaggtcgtgagctcagattacccagaatgcttggag
aaggaggatgaagaggtgctggatgaagagcagaggaggagcagagaggcatttgtgaag
atctcagtgcacttcctgaggagaatgaagcaggaggagctggctgagcgtctgcagagc
agacttcatgctccagtttgtcagcgtgaactcaaatccaacctgaagaagaagttccag
tgtgtgtttgaggggatcgctaaagcaggaaacccaacccttctgaatgagatctacaca
gagctctacatcacagagggagggactgcagaggtcaataaagaacatgaggtcagacag
attgaaacagcatccagaagaccagccagacaagaaacaaccatcagacaagaagacctc
ctcaaagcctcagctggaggagaggaaccaatcagaaccgtgatgactaagggagtggct
ggcattgggaaaacagtcttaacacagaagttcactctggactgggctgaagacaaagac
caccaggacatacagttcacatttccattcaccttcagagagctgaatgtgctgagagag
aagaagttcagcttggtgggacttgttcatcacttcttcagtgaaaccagagctgcagga
atctgcaggtttgaagagttccaggttctactcatctttgacggtctggatgagtgtcga
cttcctctggacttcctcaacaacgaggtcctgactgatgtcacaaagtcggcctcagtg
ggtgtgctcctcacaaacctcatcagggggaagctgcttccctctgctcgcctctggatc
accacacgacctgcagcagccaatcagatccctcctgagtgtgtcggcatggtgacagag
gtcagagggttcaccggcccccagaaggaggagtacttcaggaagaggttcagagatgag
gagcaggccagcaggatcatctctcacatcaagacctcacgaagcctccacatcatgtgc
cacatcccagtcttctgctggatcactgctacagttctggaggaggtcttgaagaccaga
gagggaggagagctgcccacgacgctgactgagatgtacatccacttcctggtggttcag
tccaaagtgaagaaggtcaagtacgacggaggagctgagacggatcctcactggagtcca
gagagcaggaagatgatcgagtctctgggaaaactggcctttgatcagctgcagaaaggc
aacctgatcttctatgaatccgacctgacagagtgtcgcatcgatatcagagcagcctcg
gtgtactcaggagtgttcactcagatcttcagagaggagagcggactgtaccaggacaag
gtgttctgcttcgtccatctgagtgttcaggagtttctggctgctcttcatgtccatctg
accttcttcagctctggtgtcaatctgctgacagaagaacaaacaacctcccgacggtct
aaacgctttagagacaaacctaaaccaatgcgtctctaccagaaagctgtggacaaggcc
ttacagagtcctaatggacacctggacttgttcctccgcttcctcctgggtctttccctg
aaaatcaatcagactctcctgcgaggtctgcttacacagacaggaagtcactcacagacc
aatcagagaacagtccagtacatcaaggagaagatcagtaagaatgtgtctccagagaaa
agcatcaatctgttccattgtctgaatgaactgaatgatgcttctctagtggagaagatc
caacagtcccttagttcaggacgtctctccacagaagaactgtctcctgctcagtggtca
gctctggtcttcatcttactgtcatcaggagaagatctggaggtgtttgacctgaataag
tactctgcttcagaggaggctcttctgaggctgctgccggtggtcaaagcctccaacaaa
gttctactgagcggctgtaacctctcagagagaagctgtgacgttctgtcctcagtcctc
agctctcagtcctccagtctgagagatctggatctgagtaacaaccacctgcaggattca
ggagtgaagatcttgtctgctggactgaagagtccacactgtgacctggagactctcagg
ctgtcaggctgtctgatcacagaagaaggctgttcttctctggcctcggctctgagctcc
aacccctcccatctgagagagctggacctgagctacaatcatccaggagactcaggagtc
acgctgctgtctgctggactggaggatccacactggagactggagactctcagggtggag
cctgatggagtccgatggttgacaccaggtctgaggaagtattcctgtgaactcacaatc
gacacaaacacagtaaacaaacaactcaaactgtctgacaacaacaggaaggtgacatgt
gtggaggaggatcagtcgtatcctgatcatccagacagatttgacatcagggctcagctg
ctgtgtagaactggtctgactggtcgctgttactgggaggtcgagtggagaggagacgtt
actgtatcagtgagttacagaggaatcaagaggaaaggaaacagtggagactgtttgttt
ggaagaagtgatcagtcctggagtctgaaatgccgtcatgaaggttactctgtctgtcac
aataagacagaaacattcatcacctcctcctcctcctcctctgctggtagagtagcagtg
tatgtggactgtcctgctggctctctgtccttctacagagtctcctctgacacactgatc
cacctccacaccttcagcaccacattcactgaacctctttatcctgggttctggttccgt
tctggttcctcagtgtctctgtgttctctgcaggagggagagtctcctcctgctggagaa
ccttcctctctgctcaccatgagattcagtctgtaa
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integrated database retrieval system
