Gasterosteus aculeatus (three-spined stickleback): 120821130
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Entry
120821130 CDS
T07457
Symbol
hps1
Name
(RefSeq) Hermansky-Pudlak syndrome 1 protein isoform X1
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120821130 (hps1)
Membrane trafficking [BR:
gat04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
120821130 (hps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fuz_longin_1
Fuz_longin_3
Fuz_longin_2
AraC_binding_2
Motif
Other DBs
NCBI-GeneID:
120821130
NCBI-ProteinID:
XP_040035486
UniProt:
G3NXA1
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All DBs
Position
VI:complement(10330010..10337157)
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AA seq
682 aa
AA seq
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MKCLLIASESAEVLFHWTDPEFQQNVQKQYGASQEDGQGLPAFEDSISTLFAPIIISCIT
MVDRLRDSYTSFTTENHHIYVLHQFDECLYIAVNGDGEEGECDLRRKIYVVKKMTEVLFG
MVTLSSNLLRKELRPQDTEQRARLWKHLQSLLQTYGHLRENDQSFLVEAVERLIHPTLCE
QCIEFLERRLVQQLNSSGERAGEEVMHAFILVHTKLLAFYSSRNASSLSTSDLLVLIIMA
QNMYPSNTDSDDPNPEDVESTSGSGPESFYTPEPSPPPDRGSSSSGEKPGRGSTPVFEFV
DPDVQMAEDSLQTLEVPPPDPSTPRRVFLEVSLKDGLYPMMPHSMYCLPLWPGITLVLLT
KIPTSAVAMSVYTFLEAFAKLEKRLSEGQEGSAATRGQRTIHEVRGKLDKFIKALGPTEI
QSGQLQKEWIEFKNLAFTRGGPGFSRHLIPSCKKMKTQLCAVYRQCFLLESGSSSIPQRL
SPGLQERAQSMVQEKLMDWKDFLLVKSRRNITMVSYLEDFPGLIHFICVDRSTGQMIAPS
LNLTERNTSELGKGPLAQFIRRKVWTLVNTTRRYLQKGYSTVTFRDGDFYFCYFLWFENE
TGFKLEAGDLPVLSDDSAPIGMLAWDYYRKLLRYYSKSHQGEVVKCYELLTVHLGVVPAE
IILQHCRQLASKLWEPSRNPLL
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgcttactgattgccagtgagagtgccgaggtcctcttccactggaccgaccca
gagtttcagcaaaatgtccagaaacagtatggggcgtctcaagaggacggccaggggctt
ccggccttcgaggacagcatcagcactctgtttgctccaatcattatctcctgcatcacc
atggtggacaggctgcgtgacagctacacctccttcaccacggaaaaccaccacatctac
gtcctgcaccagtttgacgagtgtctctacattgctgtgaatggcgacggcgaggaggga
gagtgtgacctgaggaggaagatctacgtggtgaaaaagatgacggaggtgctcttcggc
atggtcaccctcagcagtaacctcctcaggaaagagctgcgtcctcaggatacagagcag
agggcgaggctgtggaagcatctgcagagcctgctgcagacctacggccacctgcgggag
aacgaccagagcttcttagtggaggccgtggagaggctgatccaccccacgctgtgtgag
cagtgcatcgagttcctggagcgccgtttggttcagcagctcaacagcagtggcgagcga
gcgggagaggaggtgatgcacgccttcatcctggtccataccaagctgctggcgttctac
tccagccgcaacgcaagcagcctctccacctcggacctgctggtcctcatcatcatggcc
cagaatatgtatcctagcaacaccgactcggatgatccgaatcctgaggatgtcgagagt
acgtctggctctggtcctgaaagtttttacacgccagagccctcgccgccgcctgacagg
ggctcgagtagttcaggagagaagccggggagaggaagcacacctgtgtttgagtttgtg
gacccagacgtacagatggcagaggacagcttgcaaactctagaagttcctccgcccgac
ccgtcgaccccccgcagagtcttcctggaggtctcgctcaaagatgggttgtatcccatg
atgcctcactccatgtactgtctgcctctgtggcctggcatcacacttgtgctgctaaca
aagattcccaccagtgcggtggccatgtcagtgtacacgtttttggaggcctttgccaaa
ctggagaaacgtttgagtgaaggccaagaaggatctgctgctaccagaggacagcgaact
atccatgaagtccgcggcaaacttgataaattcatcaaagccctggggcccactgagata
cagtctggacagttacaaaaggagtggatagagttcaagaacttggccttcaccagagga
ggacctggcttcagcagacacctcattccatcttgtaagaagatgaagactcagctgtgt
gccgtgtacagacagtgttttctcctcgagtccggatcaagtagcattcctcaacgtctc
tcccccgggctgcaggaacgggcccagtccatggtgcaagagaaactgatggactggaag
gacttcctgttggtgaaaagcaggagaaatatcaccatggtgtcttacctggaggatttc
ccgggcctcatccatttcatctgcgtggaccgatccaccggtcaaatgatcgcaccgtcg
ctcaatttgacggagcgcaacacgtctgagctggggaagggcccgttggctcagttcatc
agacgcaaggtgtggaccctggtcaatacaacacggcgttacctccagaagggttactcc
acagtaaccttccgtgacggagatttctacttttgctactttctctggtttgaaaatgaa
accggctttaagttagaggccggcgacctgcccgtcctgtctgatgactccgcccccatc
gggatgcttgcctgggactactacaggaagctgctgcggtactacagcaagagtcaccag
ggcgaggtggtgaagtgttacgagctgctgacggttcacctgggggtcgtccccgctgag
atcatcctgcagcactgcaggcagctggcaagcaaactgtgggagccgtcgcgcaatcca
ctgctgtag
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