Gasterosteus aculeatus (three-spined stickleback): 120821374
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Entry
120821374 CDS
T07457
Name
(RefSeq) serine/arginine-rich splicing factor 1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03040
Spliceosome
gat05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120821374
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120821374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gat03041
]
120821374
Spliceosome [BR:
gat03041
]
Common components
Common spliceosomal components
SR proteins
120821374
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
DDE_Tnp_1
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
120821374
NCBI-ProteinID:
XP_040035763
UniProt:
A0AAQ4R3R2
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All DBs
Position
VII:24112543..24115912
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AA seq
252 aa
AA seq
DB search
MSGGGVVRGPAGSNDCRIYVGNLPPDIRSKDVEDLFYKYGAIRDIDLKNRRGGPPFAFVQ
FEDPRDSEDAVYGRDGYDYDGYRLRVEFPRSGRGGGGGGGGGGGGGGGGGPMGPQRGRHG
PPSRRSEYRVLVSGLPSSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMSYAVR
QLDNTKFRSHEGETAYIHVKVDGPRSPSYGRSRSRSRSRSRSRSRSPSQSKSGSRRSRGS
PRYSPRRSRSRT
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcggaggtgtagttcgaggaccagcagggagcaacgattgtcgcatatacgtg
gggaatcttccccccgatatccgctcaaaggacgtcgaagatttgttttacaaatatgga
gctattcgcgacatcgatctgaaaaaccgaagaggaggaccaccgttcgccttcgtgcag
ttcgaggacccgagggattctgaggatgcagtctacggacgtgatggctatgactacgat
ggctaccgcttgcgtgttgagtttcctagaagtggacgagggggaggaggcggaggagga
ggcggcggcggaggaggcgggggtggtggacccatgggaccccaaaggggaaggcatggc
cccccctctcgacgatcagagtacagggttcttgtgtcaggtcttccatccagtggaagc
tggcaggacctaaaggatcacatgcgcgaggcaggtgatgtatgttatgcggatgtgtac
cgcgatggcaccggggtagttgagtttgtacgcaaagaagacatgtcctacgctgtccgt
cagttggataacaccaagtttcgttctcatgagggagagaccgcctacattcatgtgaag
gtggacggcccccgcagcccgagctacggtcgttctcgctctcgtagccgaagtcgcagc
cgtagtcgtagccgaagcccgagccaaagcaagagtgggtcacgtcgcagcagagggtcc
ccacgctactctcctcgccgctcccgctcccgcacctaa
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