Gasterosteus aculeatus (three-spined stickleback): 120821510
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Entry
120821510 CDS
T07457
Symbol
trpv1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1 isoform X1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120821510 (trpv1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gat04040
]
120821510 (trpv1)
Ion channels [BR:
gat04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120821510 (trpv1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_5
Ank_3
Ank_4
Motif
Other DBs
NCBI-GeneID:
120821510
NCBI-ProteinID:
XP_040036043
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Position
VII:complement(17561732..17571053)
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AA seq
800 aa
AA seq
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MMHARALRPCRPSGQEARMEKSEIGFSLEADDRTEEERARQKASKKGGVASALGLGKEAP
KVPMDTDYQEEMEKPKPQIRFNLNFDKGIRGEQRNKKDSSTFTIDRLFEAAASGDVGKLE
NLHQYLRQNTKKLSDSLYRSYGKTALMKALLHLRNGKNETVELLIDISEKMGDIKEFVNA
AYTNNYYKGQTALHVAIERRNISYVKLLVSKGADVHAKAWGLFFQPHDGPNFYFGELPLS
LAACTNQPAVVDFLMENEYQRADAKMTDSHGNTVLHALVTVAASSKDQDKDNTEFITKMY
DRILKTSAKLHPNLKLEGIENNKGLTPLKMAAKTGKIGLFTHILKREFHESHTKHLSRKF
TEWVYGPVQSSLYDLASVDSYEDCSVVEILVYGSDIPNRHAMLQMEPLSQLLEEKWNKFA
GRMFFLNFLVYLVYLSIFTLVAYNKKVGQLPYPIEHTTKGYLYVSGQVVTAVANCYFFFI
GILDMKRKRPKLQTLLIDGYYEFLFFVQGVLFLITAVLYLCGKKQYLSFLVLCLALSWVN
MLYFSRGDRHMGIYSIMIQKMILSDILRFLLVYIVFLFGFSAAVVTLLIEPEVKNSTLSQ
PSKGRIFGPLDPGEECVKPSFTSISYTTLQLFKFTIGMGDMEFTQEHENTEVFYLLLIGY
IILTYILLLNMLIALMNRTVEKTTEESTSIWKLQRAITILEMEKRLSCCLRRRFRCGVEK
NLRTALGDDRRRCFRVEEVNWNKWNINLGKINEDPGCWDRGEQPASDTAPHIVNRGRSWR
SWRRLTTQSTEMSLLNTTAV
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgatgcacgctcgtgctttacgcccatgcagaccatcggggcaagaggccaggatggag
aagtcagagattggcttctctctggaggcagacgaccggaccgaggaggagagagcgcgg
cagaaagcgtcaaagaagggcggcgtggcctctgccttgggattgggcaaggaggcgccc
aaggtgcccatggacacggattaccaggaggaaatggagaagcccaagcctcaaatcaga
ttcaatctaaactttgacaaaggcattcgaggcgagcagcggaacaagaaggacagcagc
acctttaccatcgacaggctattcgaagcggccgctagcggggatgtcggaaagttggag
aacctgcatcagtacctgcggcagaacacgaagaaactctccgattccttgtatcggtcc
tacggtaaaaccgccctgatgaaggctctgctgcacctcaggaacggcaagaacgagacg
gtggagctcttaatcgacatttcagagaagatgggcgacattaaggagtttgtgaatgca
gcctacaccaacaattattataaaggccagacggctctccacgttgccatcgagaggaga
aatatttcctatgtgaagctgctggtcagtaaaggagcagatgtccatgctaaagcctgg
gggttattcttccagccacacgatggccccaacttctactttggggagctgcctctgtct
ctggcggcctgcaccaaccagcccgccgtggtggacttcctcatggagaacgagtaccaa
cgagcggacgctaagatgacggactctcacggcaacacggtgctgcacgccctggtgacg
gtggccgccagctccaaggaccaagacaaggataacacagagttcatcaccaaaatgtac
gaccgcatcctcaagaccagcgccaaactgcacccaaaccttaagctggagggcatcgag
aacaacaaggggctgacgcctctcaaaatggctgccaagacgggcaagatcgggcttttt
acacacatcctgaaacgagaattccacgagagtcacacaaaacatttgtcccgtaaattc
accgagtgggtttacggcccagtccagagctccctttacgacctcgcctccgtggactcg
tacgaggactgctccgtcgtggagatactagtctacggcagtgacatacccaaccgccac
gcgatgctccagatggagcctctgagccagctgctggaggagaagtggaataagtttgca
ggtcggatgttttttctcaacttcctggtctacctcgtgtacctgagcatcttcactctt
gtcgcctacaataagaaagttggacagctgccgtatcccatcgaacacaccaccaaggga
tacctgtatgtttcaggccaggtagtgacagcggtggccaactgctatttctttttcata
gggatcttagacatgaagaggaaacgtccaaagctgcaaacgctgctgattgatggatat
tatgagttccttttttttgtgcagggcgtcctcttcctgatcacagctgtgctgtatctg
tgcgggaagaagcagtacctcagcttcctggtgctgtgtctcgctctcagctgggtgaac
atgctctacttctccaggggcgacagacacatgggcatctacagcatcatgatccagaag
atgatcctcagtgacatcctgcgcttcctcctcgtctacatcgtcttcctctttggcttt
tcagcagcggtggtcaccttgctcatagagcctgaagtgaaaaactcaactctgagtcag
ccgtcgaagggccgtatctttggtcccctggatcctggtgaggagtgtgtcaaaccctcc
ttcacaagcatctcctacaccacgctgcagctcttcaagttcaccatcggcatgggcgac
atggagttcacccaggaacacgagaacaccgaggtcttctacctgctcctcatcggctac
atcattctcacctacatcctgctgctcaacatgctcatcgccctcatgaaccgcaccgtg
gagaagaccaccgaggagagcaccagcatatggaagctgcagagggctatcaccatcctg
gaaatggagaagagactgtcttgctgtctgaggaggaggttccgctgtggggtagagaag
aacctccgcactgccctcggagacgaccgtcgccgatgtttcagagtggaggaagtcaac
tggaacaaatggaacatcaacctgggcaaaatcaatgaggaccccggctgctgggatcgc
ggcgagcagcctgcctcagacaccgcgccgcacatagtgaacagagggaggagctggaga
agttggaggaggctgacaactcagtccacagagatgagccttctgaacaccacagcggtc
taa
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