Gasterosteus aculeatus (three-spined stickleback): 120821523
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Entry
120821523 CDS
T07457
Symbol
msi2b
Name
(RefSeq) LOW QUALITY PROTEIN: RNA-binding protein Musashi homolog 2b
KO
K14411
RNA-binding protein Musashi
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120821523 (msi2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120821523 (msi2b)
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
120821523 (msi2b)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RRM_PARP14_1
CSD
Motif
Other DBs
NCBI-GeneID:
120821523
NCBI-ProteinID:
XP_040036077
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Position
VII:complement(18460092..18665730)
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AA seq
389 aa
AA seq
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MEADGSQATSGSLNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKR
SRGFGFVTFTDAASVDKVLAQQHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN
TVVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFITFESEDIVEKVCEIHFHEINNKMV
ECKKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMGMLSYPNIVATYGRGYTGFAPSYSYQ
FPGFPATAYGPVAAAAVAAARGSGLPDYGFYSTPSDQRGGPCSFADYGSLGPQAAQMLHS
EHATSACNSPLQHLHSPDQFKNPGANQSRPGGFPGANSPGPVADLYGPSSQDSAVGNYIS
AASPQPGSGFGPGIAQRISGGPGKTGRSF
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggaagcagacgggagtcaagccacatccggaagcctaaatgattcacaacatgacccg
ggtaaaatgtttatcggtggcctcagctggcaaacctcaccagacagccttagagactat
tttagtaaattcggagaaataagagaatgtatggtgatgagagaccccacgacaaaacgc
tcaagaggatttgggttcgtaacgtttacagacgccgccagtgtagataaagtcttagct
caacaacaccacgaattagactcaaagacgattgatcctaaggttgcctttccacgtcgc
gcccagcctaagatggtcacaagaacaaagaaaatatttgtgggtggcttgtcagccaat
acagtagtggaggacgtgaagcagtattttgaacagtttgggaaggtcgacgatgccatg
cttatgtttgataagacaactaacagacatagaggatttggcttcataacttttgagagt
gaagacatcgtagagaaagtctgtgaaattcattttcatgaaatcaataacaaaatggta
gaatgtaagaaggcccagcccaaggaggtgatgttcccaccagggacacgagggcgagcc
aggggtctgccctacaccatggatgccttcatgctgggaatgggcatgctgagctaccct
aatattgtggcaacgtacggacgcggatacactggattcgcacccagctacagctaccag
ttcccaggcttcccagcgacagcatacggaccggtggcggcggcggcggtagcagcagca
cgtggctcaggcctccccgattatgggttttactctacgcccagtgaccagagggggggg
ccctgctcctttgctgactatggctccctggggccccaagcggctcagatgctgcacagt
gagcatgccacctccgcctgcaactcccccctccagcacctacacagcccggatcaattt
aagaacccaggtgccaaccagtcaaggcccggaggtttccccggtgcaaacagtccaggg
cccgtggccgacctgtacggacctagcagccaggattcagctgtgggcaactacatcagt
gctgctagccctcagcccggctccgggtttggccccggcatcgcacagcgtatatctggt
ggccccggaaagaccggacggagtttctaa
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