Gasterosteus aculeatus (three-spined stickleback): 120821620
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Entry
120821620 CDS
T07457
Symbol
ncam1a
Name
(RefSeq) neural cell adhesion molecule 1a isoform X1
KO
K06491
neural cell adhesion molecule
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
gat04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
120821620 (ncam1a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120821620 (ncam1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120821620 (ncam1a)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gat04515
]
120821620 (ncam1a)
04090 CD molecules [BR:
gat04090
]
120821620 (ncam1a)
00536 Glycosaminoglycan binding proteins [BR:
gat00536
]
120821620 (ncam1a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
gat00537
]
120821620 (ncam1a)
04091 Lectins [BR:
gat04091
]
120821620 (ncam1a)
Membrane trafficking [BR:
gat04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
120821620 (ncam1a)
Cell adhesion molecules [BR:
gat04515
]
Immunoglobulin superfamily
NCAM1/2
120821620 (ncam1a)
CD molecules [BR:
gat04090
]
Proteins
120821620 (ncam1a)
Glycosaminoglycan binding proteins [BR:
gat00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
120821620 (ncam1a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
gat00537
]
Others
120821620 (ncam1a)
Lectins [BR:
gat04091
]
I-type lectins (Siglecs)
120821620 (ncam1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
Ig_DSCAM-DSCAML_C
V-set
Pur_ac_phosph_N
C2-set_2
V-set_CD47
C2-set_3
Arylsulfotran_N
Motif
Other DBs
NCBI-GeneID:
120821620
NCBI-ProteinID:
XP_040036334
LinkDB
All DBs
Position
VII:complement(26968389..27142171)
Genome browser
AA seq
1018 aa
AA seq
DB search
MLQIRDLVWGLLFAGCAAAIQVQITPTQGEISVGESKFFLCEVVGDAKDIDWFAPSGEKI
LPNRPDIIVSRTDEATATLTIYHANVDSAGIYKCVARSGDKEAQATVQVKIFQKITFDSA
PSPQEFNEGDDADIVCDVVSSPPPAIIWKHKGSRIQVAKDVRYKIMDNGHLLIRGIKKID
EGMYNCEARIMARGEIDFRMIKVIVNVLPTIRARLSEVNATADIASSALLACDADGFPEP
SVTWTHNNVVLETGDKYTLSDDGSELLIKSVKKVDEGDYTCIAKNKAGEKSEEVSLNVFV
RPRITYLNNQTASEFDEQVTLTCEASGDPTPAISWSFQNRVFTEGEQASWTRPDKYESLD
RNIVVRSHARVSSLTLKNILFTYAGEYLCTATNSIGRDNKHMYLEVRYAPKILGTVTVYT
WEGNAANISCEAEAHPGASVVWSRDGLQLPSANTTNVKVYNTPTISYLEITPDSQYNFGT
YNCTATNAMGSESKEFVLIQADVPSSPEIELVEPFSSTAVVSFEEPDSMGGVPIIKYRVE
WRLPGQDWTGKEYHADDEMTTITIVGLKPETTYEIKMSAINGKGEGESSPATTFTTQPVQ
YSFAMSSETSAPNAVTSAALKGEPTAPKLVVKVQGRGNTLKVNWIKQDDGGSPIKHYLVR
YKAKHVSDWKPEIRVPHNSEYVTLSGLDWNTEYEIHVVAENQQGKSEPGVISYRTASDPT
TIPDDAGARSAMGTGAIVGILIVVFFLLLVGVDVTCYFLNKCGLLMCIAVNFCGKAGPGA
KSKDMEEGQAAFTKDESKEPIVEVRTEEEQTPNQGGGPTEPNETTPLTGPEPAAADATSP
VVNLLPSTATNSVAGSVSAAQSSPASDGGVLTAKAPPRNSPAAARSGPLNANAQPDVGPL
VDLSDAPKAPPSSDPTPLVPEPLSPAPASAEGPQSQRDPVKAPSSSSSSSQNKDSQVDGP
AEDAPSVLCTDPTAPAHNDGKTVKADGTEGETEVKNATAEVKTVPNEAPQANGNESKA
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaatacgggacctcgtctggggattgctgttcgccggctgtgcagccgccatc
caggtgcaaatcactccaacacaaggagagatcagcgtaggagagtccaagtttttcctc
tgcgaagtggttggagacgctaaagacatcgactggttcgcccccagcggggagaagatc
ctccccaacaggccggacatcatcgtgtcccgcaccgatgaagccacggcgacactcacc
atctaccacgccaacgtggacagtgccgggatctacaagtgtgtggcgaggagcggggac
aaggaggcccaggccacggtccaagtgaagatcttccaaaagatcaccttcgacagtgct
cccagcccacaggagttcaatgaaggcgacgacgctgacatcgtctgcgatgtggtcagc
tcgccgccacccgccatcatctggaagcacaagggctctaggatccaggtggccaaagac
gtgcgatacaagatcatggataatggccacctgctgatccgcggcatcaagaagatagat
gagggcatgtacaactgtgaggcccgcatcatggccaggggagaaatagatttcaggatg
atcaaggtcattgttaacgtgctccccaccatccgcgccaggctgtcagaggtcaacgct
acagcagacatcgctagctctgccctgctggcctgcgacgcagacggcttccctgaaccc
tccgtcacctggacacataacaacgttgtccttgaaaccggtgataagtacacgctgagc
gacgacggttcggagctgctaataaaaagtgtcaagaaagtggatgaaggagattacact
tgcatcgccaagaacaaggcgggagagaaatccgaggaagtcagcctgaacgtgttcgtg
agacccaggatcacctatctgaataaccagaccgcctcagagtttgacgaacaggtcacc
ctgacctgcgaggcctcgggcgaccccacacccgccatctcctggagcttccagaaccgg
gtcttcactgaaggagagcaggcttcttggacgcgaccagacaaatacgagagccttgat
agaaatattgtggtacgcagccatgcccgggtgtcctcgctcaccctgaagaacatcctc
ttcacatacgccggagagtatctgtgcacggccactaactccatcggccgggacaacaag
cacatgtacctggaggtccgctatgctccaaagatcctgggcacagtgacggtgtacaca
tgggaggggaacgcggccaacatcagctgcgaggcggaggctcaccccggcgcctcggtg
gtttggtccagagacggcctccagctgccctccgccaacaccaccaacgtgaaggtctac
aacacgcccaccatcagctacctggagattacccctgattctcagtataactttgggacc
tacaactgcacagcaaccaatgcgatgggctccgagtccaaggagttcgtcctgatccaa
gcagatgtgccgtcatcgccagaaatcgaactagtggaacctttctccagcacagcggtg
gtgtcgtttgaagagcccgactccatgggtggagttcctattatcaagtaccgagtggaa
tggcgtttgcccggccaggactggactggcaaagagtaccatgctgacgacgagatgacc
acgatcaccatcgtgggcctgaagccggagaccacctacgagatcaagatgtcggccatc
aacggcaagggcgaaggcgagagcagcccggccaccaccttcacgacccagccagtccag
tattctttcgcaatgtcatcagagacgtcggcccctaatgccgtcaccagtgcggccctt
aaaggggaacccactgcccccaaactggtagtcaaggtccaaggaaggggcaatactctt
aaggtcaactggatcaagcaggacgacggcggttcccccattaagcactacctggtcaga
tacaaggctaagcacgtatccgactggaaacctgaaatccgcgttccccacaacagcgag
tacgtgacgctgagcggcctggactggaacaccgagtacgagattcacgtggtggccgag
aaccagcagggcaagtcggagcccggcgtcatctcctacagaacggcttcggaccccacc
accatcccagacgacgccggcgcccgctcggccatgggcaccggagccatcgtgggcatc
ctcatcgtcgtcttcttcctgctgctggtgggcgtggacgtcacctgctacttcctcaac
aagtgcgggctcctcatgtgcatcgctgttaacttctgtgggaaggccggaccgggcgcc
aagagcaaggacatggaggagggtcaggcagcgttcacgaaagatgagtccaaggagccg
attgttgaggtgagaacggaggaagaacaaaccccgaaccaaggcgggggtcccactgag
cccaacgagaccacgccgctgacaggacctgagcccgccgctgcggacgccacctccccg
gtggtaaacctgctcccctccaccgccactaactcggttgctgggagcgttagcgcggcg
cagagcagtcccgctagcgacggcggcgtgctaaccgccaaggccccaccccgaaacagc
cccgctgccgcccggtccggcccgcttaatgctaacgcccaacctgatgtcgggcccctt
gtcgacctgagcgacgcccctaaagcccccccctcgtccgacccgacacctcttgtccca
gagccgctgagcccggcccctgctagcgccgaagggccacagagccagcgcgacccagtc
aaagcccccagcagcagcagcagcagcagccagaataaggactcacaagtagacggcccg
gccgaggacgcgcccagtgtcctgtgcacagacccgaccgcaccagcacacaatgatggt
aagactgtgaaggccgacggcactgaaggcgagacggaggtgaagaacgccacggccgag
gtgaagacggttcccaacgaggctccccaggcgaacggcaacgagagcaaagcgtaa
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integrated database retrieval system
