Gasterosteus aculeatus (three-spined stickleback): 120821621
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Entry
120821621 CDS
T07457
Name
(RefSeq) multiple PDZ domain protein isoform X1
KO
K06095
multiple PDZ domain protein
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
120821621
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
MPDZ_u10
L27_1
Motif
Other DBs
NCBI-GeneID:
120821621
NCBI-ProteinID:
XP_040036351
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Position
VII:6002756..6042178
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AA seq
2099 aa
AA seq
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MIETMDTQRALQAVERLQAKLKERGEVPTEEKLSLLKSVLQSPLFHQILALQKSVQHLRD
QESIPVSSGSDPGDHVATVKPYSDISASPHINGKTSCEDFEHLVNSMAQGRCVTHVDLQK
PVSGGLGFSVVGLKSENRGELGIFIQEIQQGSVADCDGKLKEADQILAINGQLLDQRVSH
QQAIGILQSASERVQLTVARGPIPQLVSPAVSRTPSAASTLSASSSAWQHVETIELVNDG
TGLGFGIVGGKTTGVIVKTILPGGIADQDGRLRSGDHILRIGDTDLHGMGSEQVAQVLRQ
CGNRVKLVVTRGPGDENPSLSAVMPVVLPTVNEQGCEEEEDEAFDVSLTKNTQGLGITIA
GYVGDKNAEPSGIFVKSITKDSAVDQDGRIHVGDQIIAVDCVDIQGYTNQQAVEVLRHTG
QTVHLKLIRRDFRPEETPPNVAPVDAGPAPSPPAIIPTAVAVMELESRKAAQDEKPLQTK
SEGPDVGPDAGPDAGPDVGPDAGPAVDQLTDEDEHGMEPAPFEEEDLMKKWQEILGPSNE
VVEAQVEKFSENSGLGISLEANSGHHYIRSVLPEGPVGRCGKLFSGDELLEVNGLSLIGE
THKEVVRILKELPLCVTMICCRPAPHLQTDMDAVQPETFLTASKLKKQIDPSGVPAAGDS
EVNVAAAAQEKVTEEAIASPLAMWELEIQNIELEKGEGGLGFSILDYQDPLDPAKTVIVI
RSLVPSGVAEQDGRLLPGDRLMYVDTTNLENASLEDAVQALKGANLGTVQIGVAKPLPGI
CGYSHSPHPYGEQEITSSSTIHSFDFIHIWVEEGEEEGLTEGIVYRAEPALVDACEADLS
DESVLDLTYSGTEDDTFQASMIALHGSGCSAEMDYLHSSTPTLTARLDVLDEHLCFPPPP
PPDLADDTGPFSPEESAPFTPPSFRGRDRVFGGALSSSDQFLAQHDAREEPAESSNSYSS
LTEIGTRLSLPDEPAEALHYQQVPAMSLEDIGNIEILIKGEAAGVRESAAAGDEKELTSG
SNFERTITVVKGNSSLGMTVSATKDGLGMLTRSIIHGGSVSRDGRLGVGDLLLAINGEPT
AGLTNAQARAMLRRHSLVGPDLGSACAPEDDLCPFYVNIPSLPEREDGEGEESAAYSNWN
PPRRVELFRAAGKSLGISIVGGRGMGSRLSNGEVMRGIFIKHILEDSPAGQNGTLKTGDR
IVEVDGADLRDATHEEAVEAIRRAGNPVSFLVQSIIHRPRAESICNPAASPAVEKPSTSF
TCMPHATCQRDSPACLSRAPQSSLTDSSKERAAAQTRDNKDKEGYSHSRLFLRLSPTNPF
TPTPFKPVKREAAKASPPSPVLLLPVVPHVGETDTDTLTEIPGRPAEEEEDEFGYNWKNI
IQRYGSLPGVLHMIELEKGKTGLGLSLAGNRDRSRMSVFVVGIDPNGAAGRDGRMVVGDE
LLEISGQVLYGHSHQNASSIIKSSPSQVKIIFVRNTEALDQMAVGPVREPEGDTVEPHTE
LETTAANGDADASKHVHHSMELEEDGVIGGTYVEGNPDSGDARQSASAVEGQEGCLKAAD
KLPAVNGDLLPGYTVEKEKRPINTNESLPSFSLLQSTCQDGESAVDLYVSLPSMPSDTAS
TPGQPQAEADTVQSRSSTPSTLACDPTTCPIIPGCETTIDISKGRTGLGLSIVGGCDTLL
GAIIIHEVYEEGAASKDGRLWAGDQILEVNGIDLRAASHDEAINVLRQTPHRVRLAVYRD
EAQYKEEDLWDSFTVELHKKPGQGLGLSIVGRRSRDERNDTGVFVSDIVRGGLVDTDGRL
MQGDQIMSVNGEDVRTTTQEAVAALLKCSVGPINMDVGRFKAGPFHSERRLSQSSQMSES
GSPKGPSVSCSDSGNLPGDHDKLSRSPEPPEYQETRTVEFIKGPSDSLGVSIAGGVGSPL
GDIPIFIAMMNPIGLAAQTQKLKIGDRIVSICGTSAEGMTHSQAVTLLKNATGTIQLQVV
AGGDTTVTGPPQEQAAAGLTPSCIFQDDLGPPQYKTINLERGPDGLGFSIVGGYGSPHGD
LPIYVKTVFGKGAAAEDGRLKRGDQIMAVNGQTLEGVTHEEAVGILKRTKGTVTLTVLS
NT seq
6300 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaacaatggatacccagcgtgccttgcaggcggtggagcgtctccaggccaag
ctgaaggagcggggggaggtgcccactgaggagaagctcagcctgctcaagtcggtgctc
cagagccccctcttccaccagatcctggccttgcagaagtccgtccagcatctcagagac
caggagagcatcccggtgtcgagtgggagtgaccccggcgatcatgtcgcaacagtcaaa
ccctactcagacatatcagcttctccacacatcaatggaaagacgtcatgtgaagatttc
gagcacctcgttaactccatggcgcaggggcgctgcgtgacgcacgtggacctacagaag
ccagtgtcaggaggccttggcttcagcgtggtgggcctgaagagcgagaaccgaggagag
ctcggcatcttcatccaggaaattcagcagggaagtgttgccgactgtgatggcaagctc
aaagaagctgaccagatcctagccatcaacggccagctcctggaccagagggtgagccac
cagcaggccataggcatcctgcagagtgcgtcggagagggtgcagctcaccgtggccaga
ggaccgatacctcagctggtcagccccgcggtgtcccgcacgccctcggccgccagcacg
ctgtccgccagctccagtgcgtggcagcacgtggaaacgatcgagctggtcaacgatggg
accggacttggctttggtatcgtgggaggaaagaccactggggtcattgtcaaaaccatc
cttcccggaggcatagctgaccaggatggccgcctgcgcagcggcgaccacatcctgaga
atcggagacaccgacctgcacggcatgggcagcgagcaggtggcccaggtcctcaggcag
tgtggtaacagggtgaagttggtggtcaccaggggtcccggggacgagaatccctccctc
tctgctgtcatgcccgtggtgctccccactgtcaacgaacagggctgtgaagaagaggag
gacgaagcctttgatgtgagcctcaccaagaacacccagggtctggggatcactattgct
ggctatgttggagataaaaatgcagagccctctggcatttttgttaagagcatcactaaa
gacagtgccgtagatcaagatggccgtattcacgtcggggaccaaataatagctgtcgac
tgcgtagacatccagggatacaccaatcagcaggcagtggaagtgctccgacacacgggc
cagaccgtccacctgaagctgatccgccgggacttcaggcccgaggagaccccaccgaac
gtggcccccgtggacgccggccccgccccgtccccccccgccatcatccccaccgccgtc
gccgtgatggagctggaaagcaggaaggctgctcaagatgaaaagccgctccagacaaag
agtgaaggacccgacgtgggacccgacgcgggacccgacgcgggacccgacgtgggaccc
gacgcgggccccgccgtggatcagcttacagacgaagacgaacatgggatggagccagca
ccctttgaagaggaagatctaatgaagaagtggcaagaaattctggggccaagtaatgaa
gttgtcgaggctcaggtggagaagttcagtgagaacagtgggctgggcatcagtctagaa
gccaacagcgggcatcattacatccgctccgttctacccgagggacccgttggccgctgc
ggaaagctcttcagcggagatgaactgcttgaggtcaatggtttatccctgattggtgag
acccacaaggaagttgtccgaatcctgaaggagcttcctctgtgcgtgaccatgatatgc
tgtaggcccgcccctcacctgcagacggacatggatgctgtccaaccagagactttctta
acagcatccaaattaaagaaacaaatagacccgagcggcgtaccggctgctggagactcc
gaggtgaacgtggcggcagcggcgcaggagaaggtgactgaggaggcgatagcgtctcct
ttggctatgtgggaattggagatccagaacatcgagctggaaaagggggaagggggattg
ggattcagcattctggactatcaggacccattggaccccgccaagacggtgattgtcatt
cgctcgctggttcccagcggcgtggccgaacaggatggcagactgttgcccggagaccgc
ctcatgtatgttgacaccaccaacctggagaacgccagcctggaagacgccgtccaggcc
ctgaagggagccaaccttggcacggtccagataggagttgccaaaccactgcctggaata
tgtggatattcccactctccacacccatatggtgagcaggagattacttcatcatccacc
atccattcatttgacttcatacatatttgggtggaagaaggagaggaagaaggactgact
gagggcatcgtttaccgagcagagcctgcattggtggacgcctgcgaagcagacctgtct
gacgaaagtgtgttggacctcacttactctgggacagaggacgacactttccaggcatcc
atgatcgctcttcacggcagcggctgtagtgcagagatggattacctgcactcatctacg
cccacgctgacagctcgtctggacgtgttggacgagcatctctgcttcccgccaccgccc
ccgcccgacctcgccgacgacacggggccgttctccccggaggagtcggcccctttcact
cctccgagtttcaggggccgcgaccgggttttcggaggcgcgttgagcagctctgatcag
ttcctggcgcagcacgatgctcgagaggagccggcggagagctccaactcgtacagctcg
ctcactgaaatagggacaaggttgtccctcccagatgagcccgcggaggctcttcactac
cagcaggtgccagccatgtctctggaagacattggaaatatagagatcttgataaagggc
gaggcggctggcgtgagagaatcagcagcggccggtgacgagaaagaactgacctcaggg
agcaattttgaaaggaccatcacagttgtcaagggcaactccagcctagggatgaccgtg
agcgccaccaaagacggtctggggatgctgacccgcagcataatccacggggggtccgtg
agccgcgacggacgcctgggtgtcggcgatctcctcctggccatcaacggcgagcccacg
gccggcctgaccaatgcccaggctcgcgccatgctgcgacgccactcgctcgttggaccg
gacctgggatctgcttgtgcacccgaggacgatctgtgcccattttatgtgaatattcca
agcctccctgaacgggaagacggcgagggggaggagagtgccgcttatagcaactggaac
ccacccaggagagtggagctcttccgagcggcaggcaagtccttgggtatcagcatcgtc
gggggccgagggatgggcagccggctgagcaacggagaggtgatgaggggcatcttcatc
aagcacatcctggaggacagtcctgctggacagaacgggaccctgaagaccggggacagg
attgtcgaggtggatggagcggatctgagagatgctacccatgaggaggcggtggaggcc
atacgcagggcgggcaacccggtgtccttcttggtccagagcattatccacaggcccagg
gccgagtcaatatgtaacccggccgcgtcgcctgctgtagagaaacccagcacctctttc
acatgcatgccacatgccacatgtcagagggattcacctgcatgtctgtcccgtgcgccg
cagtcgtcgctgacggactccagcaaggagagagccgcggcgcagacgagggacaacaag
gacaaggagggttacagtcacagtagacttttcctccgcctctccccaactaaccctttc
actcctaccccgtttaagcctgtgaagcgtgaagcggcaaaggcatctccccccagccct
gtcctcctcctgccagtggtgccccatgtgggagagactgatacagacacgctgacagag
atcccaggcagacctgcagaggaggaggaggatgagtttggatacaattggaagaacata
atccagcgctacggcagcctcccgggagtcctacacatgattgagctggagaagggcaag
acaggcctgggcctcagcctggcagggaacagggaccgctctcggatgagcgtcttcgtg
gtggggattgaccccaacggggcggccggccgggacgggcgcatggtagtcggggacgag
ctgctggagatcagtgggcaagtgctttatggccacagccaccagaacgcttcctccatc
atcaaaagctccccatcgcaagtcaaaatcatctttgtcaggaacacggaggcgctggac
cagatggcggtgggacctgtgagagaacccgagggagacacagtggagccgcacaccgag
ctggaaaccactgctgctaatggtgatgccgatgcttcaaaacatgtgcatcacagcatg
gagctggaggaggacggggtgatcggcggcacatatgtggagggaaaccccgacagcggc
gacgcacgtcagagtgcgtcagcggtggaaggccaggagggctgtttaaaagcagcggac
aaactcccagctgtgaatggcgatttactgccgggctacactgtggaaaaggagaagcga
cccatcaatacaaatgagagcctcccttccttctctttgctccagtccacctgccaggac
ggggagagcgcggtggatttatatgtaagcttacccagcatgcccagtgacacagcaagc
accccgggtcaaccgcaggcggaagccgacaccgttcagagtcgctcttccaccccttcc
actctggcctgtgacccgacgacctgtcccatcatccccggctgtgagaccaccattgac
atctccaagggccgaacgggcctgggcctgagcatcgtgggaggctgcgacaccttgctg
ggggccatcattatccatgaagtctatgaagagggagcagcctcaaaagacggcaggctc
tgggccggagaccaaatcctggaggtgaacggcatcgacctgcgtgcagccagccacgac
gaggccatcaacgtgctgcggcagaccccgcacagggtccggctggcggtctacagggac
gaggcccagtacaaggaggaggacctgtgggactccttcaccgtggagctccacaagaag
cccggccagggcttgggcctgagcattgtcgggaggagatcacgggacgagaggaacgac
acgggagtgttcgtgtccgacatcgtgagggggggtttggtggacaccgacggccgcctg
atgcagggcgaccagatcatgtccgtcaacggcgaggacgtccggaccaccactcaggag
gccgtggctgcactactcaagtgctctgtggggccaataaacatggatgtggggaggttt
aaggcgggccccttccactcagagagacggctgtctcaaagcagtcagatgagtgaaagc
ggcagccccaaggggccctctgtgtcatgctccgactctgggaaccttcccggtgaccat
gacaaattgagtcggagtccagagcctccggagtaccaggaaaccagaacagtggagttc
atcaaaggtcccagcgattctctgggtgtcagcatagcagggggcgtgggaagccccctg
ggggacatccccatctttatcgccatgatgaatcccatcggcctggctgctcagacgcag
aagctcaagatcggggaccgcattgtcagtatctgtggaacctctgcggaaggcatgacc
cactcgcaggcggtcactctgctcaagaacgccacaggcacaatacagctgcaggtggta
gcgggcggggacaccaccgtgacgggtccccctcaggagcaggcggctgcaggtctcacg
cccagctgcatcttccaggatgacctcggcccacctcagtataagaccatcaatctggaa
agaggaccagacggactgggtttcagcatagtgggaggctacggcagcccccatggggac
ctgccgatctacgttaaaactgtttttggaaagggtgcagcagcggaggacggccgcctg
aagcgaggagaccagataatggccgttaacgggcagactctggagggcgtcactcacgaa
gaagccgttggcatcctgaagaggaccaaaggcaccgtcactctcactgtgctatcataa
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