Gasterosteus aculeatus (three-spined stickleback): 120821664
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Entry
120821664 CDS
T07457
Symbol
farsb
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120821664 (farsb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gat01007
]
120821664 (farsb)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gat03016
]
120821664 (farsb)
Enzymes [BR:
gat01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
120821664 (farsb)
Amino acid related enzymes [BR:
gat01007
]
Aminoacyl-tRNA synthetase
Class II (U)
120821664 (farsb)
Transfer RNA biogenesis [BR:
gat03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
120821664 (farsb)
Prokaryotic type
120821664 (farsb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
B5
B3_4
EAD7
Glyco_hydro_77
Motif
Other DBs
NCBI-GeneID:
120821664
NCBI-ProteinID:
XP_040036450
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All DBs
Position
I:1840779..1846857
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AA seq
589 aa
AA seq
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MPTVGVKRDLLFTALGRTYTDEEFDELCFEYGLELDEITSEKEIISREQGGSKASGASDV
ILYKIDVPANRYDLLCLEGLVRGLQVFMNKMEAPRYRRVRPVSGEPQRLVITKETAAVRP
HAVAAVLRNITFTQERYDSFIELQDKLHQNVCRKRSLVAIGTHDLDTISGPFTYTAKPPG
EISFKPLNQTKEYTATQLMSLYKTDSHLKHFLHIIEDKPVYPVIYDSNGVVLSMPPIING
DHSKISLETKNVFIECTATDVTKAKIVLDMMVTMFSEYCAQPFTVEEAEVVYPDGKTCKY
PELAYRKEKLSSEFINRKVGINESTETLARLLTKMCLRSEVTGAGDEIEVEIPPTRSDVI
HACDIMEDAAMAFGFNNIPYTTPLTYTVAHQLPVNKLTELLRQELAAAGFTEALTFALCS
KEDIADKLGKKISETRAVHIANPKTAEFQVARTTLLPGLLKTVAANRKMPLPLKLFEISD
VVLKDETKDVGARNSRRFCAVYYNKSPGFEVIHGLLDRTMQLLEEKSARGDGYHIQAAED
STFFPGRCAEIFVRGTSVGRLGVLHPDVVARFELTMPCSALEMDVEPFL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgttggagtgaaacgggatcttctcttcacagctttgggcagaacatacacg
gatgaggagtttgacgagctgtgctttgagtatgggttggagctggatgaaattacctcg
gagaaggagataatcagccgggagcaaggcggctccaaggcctcgggggcgtctgacgtc
atcctgtacaagattgacgtaccagctaaccgctatgacctgctgtgtctggaggggctg
gtccgtggcctgcaggtcttcatgaacaagatggaggcacctcgctacagacgtgttcgc
ccggtcagcggggagcctcagcggcttgttattaccaaggagacggcggcggtgcgaccg
catgccgtggccgcagtgttgaggaacatcaccttcacacaggaacgctacgacagcttc
atcgagctgcaggacaaactccaccaaaacgtctgcaggaagaggagcctggtggccatc
ggcactcatgacctggacaccatctccggtcctttcacctacacggccaaacctccagga
gagatcagcttcaagcccctgaaccagaccaaagagtacaccgccacccagctcatgagc
ctctacaagacggacagccacctgaagcatttccttcacatcatcgaggacaagcccgtg
taccccgtcatctacgacagcaatggcgtcgtcctgtccatgccgcccatcatcaacggt
gaccattcaaaaatctccctggagacaaagaacgtcttcattgagtgtacggccacagac
gtgacgaaggcgaagatcgtgttggacatgatggtgaccatgttcagcgagtactgcgca
cagcctttcacggtggaggaggctgaggtggtgtaccccgacggcaagacctgcaaatat
ccagagctggcttacaggaaggagaagctgtccagcgagttcatcaacaggaaagttggc
atcaacgagtcgaccgagacgctcgcccggctgctgaccaagatgtgcctccgctccgag
gtcacgggggccggcgacgagatcgaggtcgagatcccgcccacgcgctccgacgtcatc
cacgcctgcgacatcatggaggacgccgccatggccttcgggttcaacaacatcccgtac
accacgccgctcacctacaccgtcgcacaccagctgccggtgaataaactgacggagctg
ctgagacaggaactcgccgccgctggattcacggaggcgctgacctttgccctgtgctct
aaagaagatatagccgacaagctgggaaagaagatctccgagaccagagcggttcatatc
gccaaccccaagacagccgagttccaggtggcgcgcaccaccttgctgcccggcctgctg
aaaaccgtagcagccaacaggaagatgccgcttcccctcaagctgtttgagatatccgac
gtggtgctgaaggacgagaccaaagatgtcggggcgaggaacagccggcgtttctgcgcc
gtctactacaacaagagcccgggcttcgaggtgatccacggcctgctggaccggaccatg
cagctgctggaggagaagtcggcccgcggggacgggtaccacatccaggccgccgaggat
tccaccttcttccccggtcgctgcgcagagatcttcgtccgcggaaccagcgtcgggcgt
ctcggcgtcctccaccccgacgtggtcgcccgcttcgagctgaccatgccctgctccgcc
ctggagatggacgtcgagcccttcctgtga
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