Gasterosteus aculeatus (three-spined stickleback): 120821680
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Entry
120821680 CDS
T07457
Name
(RefSeq) SLIT and NTRK-like protein 5
KO
K25836
SLIT and NTRK-like protein 5
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120821680
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_14
LRR_9
LRRNT
LRRCT_2
LRR_LRWD1
Hepsin-SRCR
Motif
Other DBs
NCBI-GeneID:
120821680
NCBI-ProteinID:
XP_040036497
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Position
I:complement(23708178..23716134)
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AA seq
872 aa
AA seq
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MHIWILKISLLIASSLRLIEMYDNYGEICRNLCTCEEKEGILTVSCENRGIIKLTEISPV
HFSVYHLLLTGNLLKKLSVNDFINYTGVTILHLGNNDISEIESGAFNGLQGLKRLHLNNN
KIEAIRDDTFAGLESLEYLQIDYNYISNIEPNALSKLYQLTVMILNDNLLSALPTNIFRN
VPLTHLDLRGNRLKMFPYIGLLEHMDKVVELQLEENPWNCSCELIALKAWLESIAYTALV
GEVVCATPFRLHGRDLDEVSKQELCPRRPSEDTVRPAPPSSTNGYYHTTPSAVTASATSS
AVFRSSSRPTKGTRQFNRTRLKPTSRIPGGNPYNYGPIIAFQTKSPVPLDCPTACTCNLQ
ISEIGLNVNCQERKIESISDLKPKPYNPKKMYLTGNYIPVVRRSDFVDAVGLDLLHLGNN
RISLIHDRAFGDLTNLRRLYLNGNLMDRLTGEMFFGLQNLQYLYLEYNKIKEVDAGTFRY
LANLQLLFLNNNLLKTLPVGIFSSLSLSRLNLRNNHFQNLPVSGVLDQLKMLVQMDLFEN
PWDCSCDIVGMKIWLEQLSAGTVVNEVVCEMPRRHAGMDLRSIQSEQLCPDYSDAKVSPT
PPTDEPMDDRAVTTGAPQKFNTPSSTVPLSVLILSLLLVFIMSVFVAAGLFVVVMKKRKK
SQSDRTSTNNSDVSSFNLQYSLYSNRSGPKVKAPAGHVYEYIPHPMGHMCKNPIYRSREG
NTVEDYRDLHELKVTYSSTPEDERDSSTMRSPAYSVSTIEPRENPSPIPDADHFFRGMLD
HDKQHPHPPIPAGANLEYKYTGPVSYTYNPNFDVRRQFLHPERIRETVLYGTAPSTVYVE
PNRNEYLELKAKLQSEPDYLEVLEKQTTFSQF
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgcatatctggattctcaaaataagccttctgattgcatcatctctgaggctgatcgag
atgtatgacaattatggcgagatctgtcggaacctgtgtacgtgcgaggagaaggaaggg
atcctgacggtgagctgcgagaaccggggaatcatcaaactaacggagatcagcccggtc
catttctccgtataccacctcttgctgacagggaacctcctgaagaagctgtcggtcaat
gatttcatcaattacacaggagtgaccatcctacacttggggaacaatgatatatccgag
atagagtcaggtgccttcaatggactccagggattaaaaaggttgcacctgaataacaac
aagatcgaggctatcagagacgacacctttgcaggactggagagtttggaatatcttcag
attgattataattacatctcaaatatagagcccaacgccttgagcaaactataccaactt
acagtgatgattttgaacgacaacctgctctctgccctgccgacaaatatctttcggaat
gttccccttacacacctggacctgagggggaaccggttaaaaatgttcccctacatcggc
ctcttggaacacatggacaaagttgtggaattacaactggaggagaacccgtggaattgc
tcctgcgagctgatcgctctgaaggcttggctggagagtatagcatacacggctctggtg
ggggaagtggtctgcgcgactccgttcaggctccacggtagggacctggacgaggtgtcc
aagcaggagctctgcccgagaagaccctcggaagacactgtaaggcctgcaccccctagc
agcaccaatggatattatcataccacaccttctgccgtcaccgcctccgccacctcatcg
gctgtttttaggtcctcctctaggccgaccaagggcacccggcagttcaacagaactagg
ttaaagcccacttcccgaataccagggggtaacccttacaattatggccccatcattgct
tttcagaccaaatctcctgtgcctttggactgtcccactgcctgcacgtgcaacctgcag
atatcggagatcgggctgaatgtcaactgccaagagagaaagattgaaagcatttctgat
ctgaaacccaagccatacaatcctaaaaaaatgtatctcactggaaattacatccctgtg
gtgcggagatcagattttgtggatgccgttggattggatttgcttcacctgggaaacaac
aggataagtctgatccacgacagggctttcggggatttaaccaacctgcgtaggctgtat
ttgaatggtaatctcatggacaggcttacaggagaaatgttttttggtctgcagaacttg
cagtacctctatttagagtacaacaaaatcaaggaggtcgatgcgggaactttccgttac
ctcgctaatctccagctgctcttcctcaacaacaacctcctgaaaaccttacccgtgggc
atcttttccagcctctccctgtctagacttaatctccgcaacaaccatttccaaaacctg
cccgtgagtggtgttttagatcagctgaagatgctggtgcagatggatctgtttgaaaac
ccctgggactgctcctgcgacatagtgggaatgaagatatggctcgagcagctcagcgca
ggcaccgtggtcaacgaggttgtgtgcgaaatgccgcggcgccacgcaggaatggatctg
cgctccatccaatcggagcagctctgcccagattactctgacgctaaagtctctccgacg
ccccctacggacgagcccatggacgacagggccgtcaccacgggggcacctcagaagttc
aacacccccagcagcaccgtccctctctctgtcctcatcctcagcctcctgctcgtcttc
atcatgtctgtctttgtggccgcggggctgtttgtggtcgtgatgaaaaaacgcaaaaag
tcccagagcgatcgtactagcaccaacaactccgacgtcagctcgttcaacttgcagtac
agcctctatagcaaccgctccggccccaaagtcaaagccccagccggacacgtctacgag
tatatcccccaccccatgggccacatgtgcaaaaaccctatttacagatcacgagaaggc
aacacagtggaggattaccgtgacctccacgagctcaaggtcacgtacagcagtaccccg
gaggatgagagggatagcagtacgatgcggagccctgcgtacagcgttagcaccatcgag
ccacgtgagaacccctcccctatcccggacgcagaccatttcttcagaggcatgctggat
cacgataagcagcacccccatccacccatcccggccggcgccaatttagagtacaagtac
acagggcctgtgtcgtacacgtacaaccccaattttgatgtcagacgtcagttcttgcac
ccggagaggataagagaaacagtgctctatggcacagcacccagtactgtttatgtcgag
cccaacagaaatgagtatttggagctaaaagctaaactgcagtctgagcccgattacctc
gaagttcttgagaaacagaccaccttcagccagttctga
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