Gasterosteus aculeatus (three-spined stickleback): 120821709
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Entry
120821709 CDS
T07457
Symbol
thoc2
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03013
Nucleocytoplasmic transport
gat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120821709 (thoc2)
09122 Translation
03013 Nucleocytoplasmic transport
120821709 (thoc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120821709 (thoc2)
03041 Spliceosome [BR:
gat03041
]
120821709 (thoc2)
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
120821709 (thoc2)
Spliceosome [BR:
gat03041
]
Complex C
Other components
EJC/TREX
120821709 (thoc2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
120821709 (thoc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
120821709
NCBI-ProteinID:
XP_040036565
UniProt:
A0AAQ4PJI3
LinkDB
All DBs
Position
7:20140729..20161786
Genome browser
AA seq
1561 aa
AA seq
DB search
MATLILPCEWIKNWEKSGKLKFVQLCKELTEKTDHGSEIRDIQAALYEVCWQVVQGNLKL
DLVVSALGDMMELRDDMPSILADVFSTLDLETAALEEKIKRDHYTQLVGACLFFVPDAIL
KERLDPETLESLGLIKQAHQFNQKIVKIKTKLFYKQQKFNLLREENEGYAKLITELGQDL
SGNITSHLVLESIKSLIGCFNLDPNRVLDIILEVYESRSDQDEFFLSLIKSYMCEPLTLC
HILGFKFKFYQEPNEETPKSLYHIAAALLHHHLIELEDLYVHLMPVDATIIEEHKRDISE
AKQIARKLVMVVLPSEKSEDKDKEKEKEEEKNDKPPDNQKLGLLEALLRIGDWHHAQRIM
DQMPSFYASSHKAIALALCQLVHLTVEPLYRRAGLPKGARGCVIHPLRNKGAPRPAESFE
DLRRDTFSMICYLGPHLSHDAILFAKIVRLGKGFMKEYQSDSRSDVKEKMETLLSCFLSI
ADQVLLPALSLMECNACMSEELWGLFKLFPYQHRYRLYGQWKNETYTSHPLLVKVKAQTV
ERAKYIMKRLTKENVKQSGRQIGKLSHSNPTILFDYMLSQIQWYDNLIVPVVDSLKYLTS
LNYDVLAYCIIEALANPEKEKMKHDDTTISSWLQSLASLCGAVFRKYPIELAGLLQYVTN
QLKAGKSFDLLILKEVVQKMAGIEITDEMTSEQLEAMTGGEQLKAEGGYFGQIRNTKKSS
QRLKDVLLDHELALPLCLLMAQQRNGVVFLEGGEKHLKLVGHLYDQCHDTLVQFGGFLAS
NLSTEDYIKRVPSIDILCNQFHTPHDAAFFLSRPMYAHQILSRYDELKKAEKGNRQQQKA
HKYVAACEQVMTPVHEAVVSLHPARVWDDLRPQFYATFWSLTMYDLAVPHSAYEREVNKL
KVQIKAIEENPEIPMNKKKKEKERCTALQEKLQEEEKKQLEHVQRVLHRLKLEKDNWLMA
KSTKNETITKFLQLCLFPRCIFSSIDAVYCARFVELVHQQKTPNFCTLLCYDRVFSAIIY
TVASCTENESHRYGRFLCCMLETVTRWHSDRATYEKECVNYPGFLTIFRATGFDGGNKAD
QLDYENFRHVVHKWHYMLTKASVHCLETGDYTHIRNILIVLTKILPCYPKVLNLGQALEC
RVHKICLEEKDKRPDLYALAMGYSGRLKGQKVHMVPENEFHHKEQPARSSTPANQQNGPG
STGKPATTTSKTEEGTSEDGDRGKDKSQGNTKPVNKANSAAAKVTTSNGNGALNSTKAVK
ERDDKEKSGKEKKEKKEKTPGSTPETKAENRREKQRDERAGKEERVAREGKEKTPKADRE
KLKAEEKGSKDDKAKAGNGEPMEPPRERDAIKESKSKEKGDRIAVAGSLKSPVPRLESAE
SERDHKRRKLDSHSSPSHSSSVKDNSNEPKESTSKHHANYNSVTRSKSREREMEKKDSDN
TRSKEKKEEKDRKERKRDALNELETSLESKRRKDENGMNSSKNSKSTSPSCDSPLSAEKE
KIKRPKSSSKEKAESVKPERTSSGGKKESRHDKEKSEKKEKRDSSGGKEEKKHHKSSDKH
R
NT seq
4686 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacttatcctaccttgtgaatggatcaaaaactgggaaaaatcaggcaaactc
aagtttgtacaactctgcaaagaactcacagagaagactgatcatggaagtgagattaga
gatatacaggcagccttatatgaggtctgctggcaggttgtacaggggaacctgaagttg
gaccttgttgtcagcgcccttggggacatgatggaactccgagatgacatgccatcaatt
ttagcagatgtgttcagtacactagatttagagactgctgcactggaagaaaaaatcaaa
cgcgaccattacacacaactggtgggagcatgtttgttttttgttccggatgccatcctg
aaagagaggctggatccagaaacccttgaatctcttggacttataaaacaagctcatcag
ttcaatcagaagattgtaaaaatcaagactaaactattttacaagcaacagaagtttaac
ttgctaagggaggagaatgagggctacgccaaactaatcaccgagctgggccaggacctc
tcaggcaacatcaccagccaccttgtcctggagagcatcaagtccctcatagggtgtttc
aacttggaccctaatcgtgttttggacataatcttggaggtttatgagagtcggtctgac
caagatgagttcttcctgtctctcatcaaatcctacatgtgtgagccactcaccctttgc
cacatcctgggttttaagttcaaattctaccaggagcccaacgaggaaacccccaagtca
ctttaccacattgctgctgccctgcttcaccatcacctgatagagctggaagatctctat
gttcatctcatgccagtagatgccaccatcatagaggaacacaaacgagatatttcggag
gccaagcagatcgcccgcaagctggtcatggttgtgttgccgtcagagaaaagcgaagac
aaagacaaggagaaggaaaaggaggaggagaagaatgataagccccctgacaaccagaag
ctgggcctgttggaggcgttgcttagaattggagactggcaccacgcccagagaattatg
gaccagatgccgtccttctatgcttcttcgcacaaggccattgcgctggcactctgccag
cttgtgcatctgacggtggagcctctttacagaagggccggcctcccaaaaggggcaaga
ggatgtgtaatacatccactgaggaacaagggggcccctcggccagccgagagcttcgag
gacctacgaagggacacatttagcatgatctgctacctgggccctcatctctcccatgac
gcaattctttttgccaagattgtgcgtctgggcaaaggtttcatgaaagagtaccaaagt
gatagcagatctgatgtcaaagaaaaaatggaaaccctattgagttgtttcctgagcatt
gcagaccaggttctactccctgccctctctctgatggagtgtaacgcgtgcatgtctgag
gagctgtggggtctcttcaaactcttcccctaccagcacaggtaccggttgtatggccag
tggaagaacgagacgtacaccagccatccactgttggtcaaagtcaaagctcaaactgta
gaaagggccaaatacattatgaagcggttgaccaaagaaaatgtgaaacaatctggaaga
cagattggcaagctgagccatagcaatcctaccatcctctttgattatatgctttctcag
atccaatggtatgacaacctaatcgttccagtggtggactccttgaaatacctcacatcc
ctcaactacgatgtcttggcctattgcatcattgaggctctagccaatccggaaaaggag
aagatgaaacacgacgacaccaccatctcctcgtggcttcagagcctggcgagtctgtgt
ggagccgtgttcagaaaatacccaatcgagttggctggccttcttcaatatgtcacaaat
cagctgaaagcagggaagagttttgacctgttgatcctgaaagaggtggtgcagaaaatg
gccggcattgagatcaccgatgagatgacctcagagcagttggaagccatgaccggaggg
gagcaacttaaagccgaggggggctactttggccagatcaggaacactaagaagtcatcg
cagcgcctgaaggatgtactgctcgaccatgagttggccctgcctctgtgtttactcatg
gcccagcaacgaaacggtgtggtgttcttagagggcggagagaagcaccttaaacttgtt
ggtcatctgtatgaccagtgtcacgacaccttggtgcagtttggtggttttctggcctcc
aaccttagcactgaggactacatcaagcgggttccctccattgacatcctgtgtaatcag
ttccacactccacatgatgctgccttctttctgtctcggccaatgtacgcccatcagatt
ttgtccaggtacgacgagttgaagaaagcagagaaaggcaaccggcagcagcagaaggca
cacaagtatgtggccgcttgtgagcaggtgatgacaccagtgcacgaggcagtcgtgtca
ctccacccggcacgggtctgggacgacctccgcccgcagttctacgctaccttctggtcc
ctcaccatgtatgacttggccgttccgcattctgcctacgagcgtgaggtcaacaagctc
aaggtccagatcaaggccatcgaggagaatccagagatccccatgaataagaaaaagaag
gagaaggagcgctgcactgccctgcaagaaaaactgcaggaggaggagaagaagcagctg
gagcacgtccaacgggttctgcaccgcctcaaactggaaaaagacaactggttgatggcc
aaatctacaaagaatgagaccataacaaagtttctgcagctgtgtctgttcccccgctgc
atcttctcgtccatcgacgcggtgtactgtgcacgcttcgttgagctggtccaccagcag
aagactcccaacttctgcaccctgctgtgctacgacagggtgttctccgccatcatttac
actgtagccagctgtacggaaaacgagtcccatcgctacggacgcttcctgtgctgcatg
ctggagacggtgacccgctggcacagcgaccgtgcaacctatgagaaggagtgcgtcaat
taccccggcttcctgaccatcttcagagccacgggcttcgatggtgggaacaaagcagat
cagctggattatgagaacttcagacatgtcgtgcacaaatggcactacatgttgacgaaa
gcttcagtccactgcctggagacgggagattacacgcacatccggaacattctcatcgtt
ctcaccaagatcctgccctgctaccccaaagtcttgaacctaggccaggcgcttgagtgt
cgcgtccacaagatctgcctcgaggagaaggataagaggccagacctctatgccttagca
atgggttattcaggtcggttgaaaggccagaaggtgcacatggtcccagagaatgagttt
caccacaaggagcagccagcccgcagttccaccccagccaatcaacagaacggccccggc
agcacaggcaagcctgccaccaccacaagcaagacggaggaggggacgtccgaggatggt
gatcggggcaaggataaatctcaggggaacacaaagccagtgaacaaagccaacagtgca
gcggccaaagtgaccaccagcaacgggaacggtgctctcaacagcaccaaagccgttaaa
gaacgggacgacaaagagaagagcgggaaggagaaaaaagagaaaaaagaaaagacacca
ggcagcactcccgagacaaaggcagagaaccgtcgggagaagcagagagacgagagagca
gggaaggaggaacgggtggcacgcgagggtaaggagaagacccccaaggcagacagggag
aaattgaaggcggaagaaaagggcagcaaagacgacaaggccaaagccggcaacggggag
ccaatggagccgcccagggagcgtgatgccatcaaggagtccaagagcaaggagaaagga
gacagaatcgcagtggctgggtccctaaagtcaccggttcccagattggaatcagccgaa
tctgagagggatcacaaaagacgaaagctcgacagtcactcttctccgtcccactcctcg
tctgttaaggacaatagcaacgaacccaaggagtcaacatccaagcaccacgccaactac
aattcagttacccggtcgaagagcagagagagggagatggagaagaaagattcagacaac
acacgatccaaagagaagaaggaagaaaaggatcgtaaagaaaggaagagagatgctctc
aacgagcttgagacgagcctggagtccaaacgtcggaaggatgagaacggaatgaattcc
tccaaaaacagcaagagcacgagtccttcctgtgactctccgctttcagccgaaaaggag
aagatcaagaggcccaagtcctccagcaaagagaaggccgagtctgtgaaacccgagcgg
acttcctccggaggcaaaaaggagtccagacacgacaaagagaaatctgaaaagaaggag
aagagggacagcagcggaggaaaagaagagaaaaagcaccataaatcctctgacaagcac
agataa
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integrated database retrieval system
