Gasterosteus aculeatus (three-spined stickleback): 120821744
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Entry
120821744 CDS
T07457
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gat03021
]
120821744 (supt6h)
03036 Chromosome and associated proteins [BR:
gat03036
]
120821744 (supt6h)
Transcription machinery [BR:
gat03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
120821744 (supt6h)
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
120821744 (supt6h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
S1
S1_RRP5
HHH_3
HHH_9
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
120821744
NCBI-ProteinID:
XP_040036626
UniProt:
A0AAQ4RBZ5
LinkDB
All DBs
Position
VII:21961118..21976425
Genome browser
AA seq
1759 aa
AA seq
DB search
MSDFIESEAEESEEEFDEKDLKPKKTQRFLEEDDEEEEENTEDQDERGNLRGLIDDGEEE
EEEGDRPRSASAAGSDSEEEVRHRRKKRNYDDYLDDDDLDLIEENLGVKVKRRKKKYDRV
KTLDDDEEDDDQKDMIADEIFHGDADGELEEGEAVDEPLHHADDDEEGEDEESDIDDFIV
DDDGQPITKKRGKKFSGYTDAALQEAQEIFGGDFDFADFDADAYDQGEEEEEDQDEEGWD
RPKKQTKRRQGRKSIFEIYEPSELESSHMTDQDNEIRSTDMPERFQLRSIPVKPAEDDEL
EEEAEWIFRHGFSTLTISMQESTDYLDRGTTTNFSRKGPSTIAKIKEALNFMRNQQFEVP
FIAFYRKEYVEPELNINDLWKVWQWDEKWTQLKTRKQNLTRLFRKMQSYQYEQISADPDK
PLADGIRPLDTADMERLKDVQTLEELSDVYNHFLLYYGRDIPKMQNTAKSSKKRLKKIKE
VTEDGEEEELEIEEEEEEQKGPDLKLASRRDMYSICQSVGLDGLAKKFGLTPEQFGENLR
DSYQRHETEQFPAEPVELAKDYVCSQFSTSEAVLEGTRYMVAMQIAREPLVRHVLRQTFQ
ERAKINIKPTKKGKKEVDEAHFAYSFKYLKNKAVKELNGDQFLKMCLAEDEGLLSIDICI
DLVGVKGYAGDQTYFDEIKQFYYRDEFSHQVQEWNRQRTLAIERALTQFLYPQMAKELKS
KLITEAKESIIRSCCRRLYNWLKVAPYRPDQQVEEDDDLMDESQGKGIRVLGVAYAPSRD
TPVFCALINGEGEVVDFLRLPYFMKRRNAFKEDEREKKAHDIETLKKFLSGKKPHVVAVA
GESRDAQMIMEDIKRAVSELEQESSLPAVGVELVDNELATLYMNSKRSEIDFRDYPPLLR
QAVSIARKIQDPLMEYAQVCSTDDDILCLKLHPLQEQVVKEDLLCALHCEFINRVNEVGV
DVNKAIAHPHTQSLVQFVCGLGPRKGSQLLKILKQNNTRLENRTQLVTMCHMGPKVFINC
AGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANPAGALEE
ILENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRVVYRVPNTEEVFN
LLTKETPETFYIGKLITSIVTGIAHRRPQGESYDQAIRNDSTGLWQCPFCQQDNFPELSE
VWNHFDSGSCPGQAIGVRSRLDNGVQGFIPTKFLSDKTVKHPEERVKVGMTVHCRIMKID
IEKFSVDLTCRTSDLMDKANEWKLPKDSYYDFDTETEDQKHEEELKKKQQRTPYIKRVIA
HPNFHNISFNQAEKMMESLDQGDLIIRPSSKGENHLTVTWKVAEGIYQHVDVREEGKENA
FSLGHTLWINNEEFEDLDEITARYIQPMASFARDLLGHKYFQDGLWGIKEKMEELLVKTK
REKPTFIPYFLSACKEMPGKFILGYQPRGKPRVEYVTITPDGFRYRSQIFPTVNGLFRWF
KDHYQEPVPGVTPSNSSRTRTPASLNATPANINIADLTRAVNALPRNMTSQMFSAIAAVT
GQGQNPNTTPAQWGSSQYGYSGSTGGGGGGGGGSSSAYHVFATPQQPMATPMMTPSYSYT
TPSQQALGTPQYASSTPQSSHAHGHPHGSHVSHPSHHGHSSHHSHASGTPSSSTSSRGRT
PQQQPQPSPQTPQPSKAGGSSASAVDWGKMAEQWLKEKEAEGRKKTPRMTPRPSPSPMIE
STPMSIAGDATPLLDEMDR
NT seq
5280 nt
NT seq
+upstream
nt +downstream
nt
atgtcagactttattgagagcgaggcagaggagtcagaggaggagtttgatgagaaagac
ctcaagccgaaaaagacccagaggttcttggaggaagatgatgaagaggaagaagagaac
acagaggaccaggacgagcgaggaaatttacgcggactcattgatgatggagaggaggag
gaggaggagggggaccgcccgagaagtgcgagtgcagcagggagtgactcagaagaggaa
gtcaggcatcggcgtaaaaagcgaaattatgacgactacctcgatgacgatgatctggac
ctaattgaggaaaacttgggtgtaaaagtcaaaaggaggaaaaagaagtacgaccgtgtc
aaaacacttgatgatgatgaagaggatgatgatcagaaggacatgatcgcagatgagata
tttcatggtgatgccgatggcgagctagaggaaggcgaggcggtcgatgagcctctccac
cacgcagatgacgacgaagaaggagaggacgaggagtccgatatagacgattttattgtt
gatgatgatggccaacccatcaccaaaaagaggggcaagaaattctcgggatacacggac
gcagctctccaggaggcccaagagatttttggtggggactttgactttgccgactttgac
gcagacgcatacgaccagggcgaggaggaggaggaggaccaggatgaggagggctgggac
cgacccaagaagcagacgaagaggaggcaggggaggaaaagcatctttgagatatacgag
cctagcgagttggaaagtagtcacatgactgaccaagacaacgagatccgctctacggat
atgcccgaaaggttccagttaaggtccatccctgttaaacctgctgaggatgatgagctg
gaagaggaagcagagtggatcttcagacatggcttctccactcttaccatctccatgcag
gagagcacagattatttagaccgagggacaaccacaaacttcagcaggaaaggtcccagc
acaattgccaagatcaaagaagccctcaacttcatgaggaatcaacaatttgaggtccca
tttatagctttctacaggaaagaatatgtggagccagaactaaacatcaatgatttgtgg
aaggtgtggcagtgggatgaaaagtggactcaactgaagacacgaaaacagaaccttacc
cgtctgtttcggaagatgcagtcctaccagtatgagcagatctctgccgaccccgacaaa
cctttggctgacggtatccgtcctctggacaccgctgacatggagaggctaaaagacgtg
cagactcttgaagagcttagtgacgtgtacaaccactttctgctctactacggccgagac
atccccaagatgcagaatactgccaagtccagtaagaagaggctcaagaagatcaaagaa
gtgacagaggatggggaagaagaggaattggagatcgaagaagaagaagaagaacagaaa
gggccggacctcaagctggcgtctcgtagagatatgtacagcatctgccagagcgtgggg
ctggatggcttggctaaaaagtttgggttaactccagagcagtttggagaaaatttgaga
gacagttaccagcgtcatgagaccgagcagttccccgctgagcctgtggagctggccaaa
gattatgtttgcagtcagttcagcacttctgaggcagtgctggaaggaactaggtacatg
gtggccatgcagattgctcgcgagccgctggtcagacatgttctccgacagacctttcag
gagagggccaagatcaacatcaagcctaccaagaagggcaaaaaggaggtagacgaggcg
cattttgcctactccttcaagtaccttaagaacaaggctgtaaaggagctgaatggggat
cagttcttaaagatgtgcctggcagaggacgaggggctgctttccattgacatctgtatc
gaccttgtaggggtcaaagggtatgctggggaccagacgtactttgatgagatcaaacag
ttctactacagggacgagttcagtcaccaggtgcaggagtggaacaggcagcgtacttta
gccatagagagagccctcactcagttcctctaccctcagatggcaaaggagctcaagagc
aaactgatcactgaggccaaagagagcatcatcaggtcctgctgtcgtcggttgtataac
tggctcaaagtggctccttaccgaccagatcagcaggtcgaggaagacgatgatctgatg
gatgagagtcagggcaaaggcattcgggtgctgggtgtagcctatgcgcctagcagagac
acgccagttttctgtgctctgatcaatggggaaggcgaggtggtcgacttcttgcggctg
ccctacttcatgaagaggaggaatgcctttaaggaggatgagagggagaagaaggcccac
gacattgaaactctcaagaagtttctgtctggcaagaaaccacacgttgttgctgtcgct
ggggaaagccgagatgctcaaatgatcatggaggacatcaagagggccgtcagcgagctg
gagcaggagtcctctctacctgctgtgggcgtagagctcgttgacaacgagttggccaca
ttgtacatgaacagcaagagatctgagattgattttagggactaccctcccttactgcga
caggctgtgtcgatagccaggaagatccaggatcccctgatggagtatgctcaggtttgc
agcaccgatgatgacattctctgcctcaaactacacccgctacaggaacaagtggtgaag
gaggatttgctctgtgctcttcactgtgaattcatcaaccgcgttaatgaggtcggagtg
gacgtgaacaaggccattgcccatcctcacactcagagcctcgtccagttcgtctgtggt
ctgggaccaagaaagggctcccagctactcaagattcttaagcaaaacaatactcgactg
gaaaacagaactcagctggtcacaatgtgtcacatgggacccaaagtttttattaactgt
gccggtttcatcaagatcgacacggcatcgcttggggacagcactgactcgtacattgag
gttctggatggatctcgtgtccaccctgagacgtatgagtgggctcgcaaaatggccgtg
gacgcccttgagtatgatgagtcggcggaagatgccaaccccgctggagctctggaggag
atcttagaaaatccagaacgtctcaaagatttggacctggatgcgtttgctgaggagctt
gagagacagggctacggaaacaaggggatcactctgtatgacatccgtgcagagctgagc
tgcagatacaaagacctgagagttgtatacagagtccccaatactgaggaggtcttcaac
ctgctcaccaaggaaactccagagaccttttatatcggtaagctgatcaccagtatagta
actggtattgctcaccgacggcctcagggagagagctacgaccaggccatccgtaacgat
tcaacggggctgtggcagtgtcccttctgtcagcaggacaacttccctgaactcagcgag
gtgtggaatcactttgacagcggctcgtgtccaggtcaggccattggggtgcggtccaga
ttagataatggcgtccaggggttcattcccaccaagttcctcagtgacaaaactgtcaaa
caccctgaggagagggtcaaggtgggcatgacagttcactgccgcataatgaaaatcgac
attgaaaaattcagcgtcgacctcacgtgtcgcacctcagatttgatggacaaggccaat
gagtggaagctccccaaagacagctactacgacttcgacacagagaccgaagaccagaaa
cacgaggaggagctcaaaaagaaacaacagcgaacaccatacataaagcgtgtgattgcc
caccccaacttccacaacattagtttcaaccaagcagagaagatgatggagagtctggac
cagggagacttgatcatccgacccagcagcaagggagagaaccacctcacagtcacctgg
aaagtggctgaaggcatctaccagcatgtggatgtgagagaagaaggcaaagagaacgca
ttcagcttagggcacactctctggatcaataacgaagagtttgaagatctggatgaaatc
actgctcggtatattcagccaatggcgtcgttcgccagggatctactggggcataagtac
ttccaggacggcctctgggggatcaaagagaaaatggaggagttattggtcaagacaaag
cgagagaagcctactttcatcccatacttcctttcggcatgtaaagaaatgccaggaaaa
ttcatactgggctaccaacctcgtggaaaaccacgggttgagtatgtgaccatcaccccg
gatggcttccgctatcgttcccagatatttcccacagtgaatggactatttcggtggttt
aaggatcattaccaagagcctgtgcccggcgtcactcccagcaacagtagccgaacaagg
acacctgcatccctcaatgccaccccagccaatatcaacatcgcagacttgacgcgagct
gtcaacgccctcccacgcaacatgacctctcagatgttcagtgccatcgccgcagtcaca
ggccagggccagaaccccaacaccacccccgcccagtggggctccagccagtatggctac
agtggcagcacaggaggaggaggaggaggaggcggagggagctcctctgcttatcatgta
tttgctacacctcagcagcccatggcgactcccatgatgacgcccagctactcttacacc
acaccgagccagcaggccctcggcacgccgcagtacgccagctccacgccgcagtcctct
cacgcacatggccatccccacggaagccacgtgtcccacccgagccatcacggccacagc
agtcaccacagccacgcatccggcacgccgtcctcctctacctcgtccagaggaaggacg
ccgcagcagcagccgcagccgtcgccgcagacgccacaaccgtcaaaagccggcggcagc
agcgcctctgccgtggactggggcaagatggcggagcagtggctgaaggaaaaagaagcg
gaggggcgcaagaaaaccccgcggatgacgccgcgaccgtctcccagcccgatgatagag
agcacgcccatgtccatcgccggagacgccacacccctactggacgagatggaccgatag
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