KEGG   Gasterosteus aculeatus (three-spined stickleback): 120821788
Entry
120821788         CDS       T07457                                 
Name
(RefSeq) lissencephaly-1 homolog B
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
gat  Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat00565  Ether lipid metabolism
gat01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:gat00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    120821788
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gat03036]
    120821788
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gat04147]
    120821788
Chromosome and associated proteins [BR:gat03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    120821788
Exosome [BR:gat04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120821788
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st EIF3I WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st ANAPC4_WD40 NBCH_WD40 Beta-prop_Vps41 WDR90_beta-prop_4th Beta-prop_EML Beta-prop_DCAF4 Beta-prop_Nup120_160 LisH LisH_PAC1 Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_DCAF12 eIF2A Beta-prop_WDR35_TULP_N Nucleoporin_N Pox_A_type_inc Beta-prop_NUP159_NUP214 ARMC9_LisH SutA-RBD LisH_2 DUF2570 LisH_WDR26
Other DBs
NCBI-GeneID: 120821788
NCBI-ProteinID: XP_040036742
LinkDB
Position
VII:21742030..21752259
AA seq 410 aa
MVLSQRQRDELNRAIADYLRSNGYEEAYSTFKKEAELDMNEEVDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEMTHGGPVGQKRDPKEWIPRPPERYALSGHRAPVTRVIFHPVF
SVMVTASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMSIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMV
RPNQDGSLLASCSNDQTVRVWVVASKECKAELREHEHVVECIAWAPDSAHPTILEATGSE
TKKSGKPGPFLLSGSRDKTIKMWDVSIGICLMTLVGHDNWVRGVLVHPGGRFIVSCADDK
TLRIWDYKNKRCMKTLCAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggtgctgtcacagagacaaagagatgaactaaaccgagctatagccgactatctccgt
tccaatggatacgaagaggcctattccaccttcaaaaaagaggctgagttggatatgaat
gaggaggtagataaaaagtatgcgggccttttggaaaagaaatggacctcggtcatccga
ttacaaaagaaggtgatggagctggaatcaaagttgaatgaggcaaaggaggagatgaca
cacggcggacctgtgggtcagaagagggaccccaaggagtggatcccccgccccccagag
agatacgccctgagcgggcaccgcgctccagtcacgcgtgtcatattccacccagtcttc
tccgtcatggtcacagcctccgaggatgcgaccatcaaggtgtgggactatgaggccggg
gactttgagcggaccctgaagggccacacggattctgtgcaggacatctcctttgaccag
acggggaagttgctggcttcatgttcagctgacatgagcatcaaactctgggactttcag
gggtttgagtgcatccgaacaatgcatggccacgaccacaatgtgtcgtctgtagcaatc
atgccaaatggggaccacatagtgtccgcctcaagagacaagaccatgaagatgtgggag
gtggccactgggtactgtgtgaagacgttcacaggccacagggaatgggtaaggatggtg
cgtcccaaccaggacggctcgttgcttgcgagctgctccaacgaccagacagtgcgtgtc
tgggtggtcgcctccaaggagtgcaaagctgagttacgggagcatgaacatgtggtagag
tgtatcgcctgggcccctgacagtgctcaccccaccatcctggaggccacaggctccgag
accaagaagagtggtaaacctggccccttcctcctctccggatcgagagataaaacgatt
aagatgtgggacgtcagcatcggcatctgcctcatgactctggtgggacacgacaactgg
gtgcgcggcgtgttggttcaccccggagggagattcatagtgagctgtgccgacgataaa
acccttcggatctgggactacaagaacaaacgctgcatgaagacgttgtgtgcccacgaa
cacttcgttacctctctggatttccacaagactgctccctacgtggtgacgggcagtgtc
gatcagacagtcaaagtctgggagtgccgctga

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