Gasterosteus aculeatus (three-spined stickleback): 120821790
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Entry
120821790 CDS
T07457
Symbol
tmtops3b
Name
(RefSeq) teleost multiple tissue opsin 3b
KO
K04256
c-opsin
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gat01009
]
120821790 (tmtops3b)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
gat04030
]
120821790 (tmtops3b)
Protein phosphatases and associated proteins [BR:
gat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120821790 (tmtops3b)
G protein-coupled receptors [BR:
gat04030
]
Rhodopsin family
Vision
Opsin
120821790 (tmtops3b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
7TM_GPCR_Srx
Srg
7TM_GPCR_Srsx
7TM_GPCR_Srw
DUF6053
Motif
Other DBs
NCBI-GeneID:
120821790
NCBI-ProteinID:
XP_040036744
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All DBs
Position
VII:21592145..21596489
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AA seq
378 aa
AA seq
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MSDNQVAMVILLQHSNNLSTGLSSLSDPALGRAGHTAAAVVLGLILVLGFLGNFLVLMVF
SRFPGLVTPVNVLLINISASDMLVCILGTPLSFAASVGGRWLTGSYGCRWYGFSNAFFGI
VSLVSLSLLSLERYSAVLGRTHSNSDSSQYRRAWLAVAASWLYSLVWTLPPLLGWSSYGP
EGPGTICSVQWHKRSTAARSYIGCLFVFCLLLPLLLMLFCYGRILLAVRAVARQVSRINQ
SSAERREGRVLLMVVSMVTGYLLCWMPYGVVAMLASFGKPGVVSPAASLIPSLLAKTSTV
LNPVIYVLLNKQFSRCLLNTIRCGSEAPPTQAQHTLASRRGVWRPPPTEEQNTVHVMFTS
RDQQLQQPALVLVAQYAT
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataaccaggttgccatggtgatcctcctgcagcatagcaacaacctcagcacc
gggctcagctccttgtcggatcccgcgctgggccgggctggtcacaccgcggcggccgtg
gtcctcggactcatcctggtcctgggcttcctcggtaacttccttgtgctcatggtgttc
tcgcgcttccccggtctggtgactccggtgaacgtgctgctgatcaatatcagcgcgagc
gacatgctcgtctgcatcctcgggaccccccttagcttcgcggccagcgtgggcggcagg
tggctgaccgggtcttacgggtgccggtggtacggattctccaacgcgttttttggtata
gtatctctggtgtctctctctctgctgtccttggagcggtactctgctgtgcttggcaga
acccactcaaactcggactcctctcagtaccgccgggcctggctggctgtagcggcttcc
tggctctactctctggtctggactcttccgccgctgctgggctggagcagctatgggccg
gagggtcccggcaccatctgctccgttcagtggcacaagcgctccaccgcagcgcgctcc
tacatcggctgtttgtttgtcttctgcctgctgctgccgctcttgctcatgctcttctgc
tatgggaggatcttgttggccgtgcgagcggtcgcaagacaggtgagcagaatcaatcag
tcctcagctgagaggagggaaggccgtgtccttttaatggtggtctccatggtgacaggc
tacctgttgtgctggatgccatacggtgttgtggcgatgctcgcctcctttggaaagccc
ggcgtggtgtcgcctgctgccagtttgatcccgtccctgctggcaaagaccagcaccgtc
ctcaaccctgttatttatgtgctgctcaacaagcagttctcccggtgtctcctgaacacg
atcaggtgcggctcagaagctcctcccacccaagctcaacacacactggccagcagaagg
ggtgtctggcgtcccccaccaacagaggaacaaaacacagtgcacgtcatgttcacatcc
agagaccagcagctacagcagcctgcgctggtgctagtggctcaatacgcaacatag
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