Gasterosteus aculeatus (three-spined stickleback): 120821939
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Entry
120821939 CDS
T07457
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
120821939
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gat02000
]
120821939
Transporters [BR:
gat02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
120821939
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GFIT
Motif
Pfam:
SNF
DUF373
Motif
Other DBs
NCBI-GeneID:
120821939
NCBI-ProteinID:
XP_040037016
UniProt:
A0AAQ4PL66
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Position
7:26594028..26601073
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AA seq
607 aa
AA seq
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MKGNNGTCTVSSENKPPPTPKESEGRGHWGSKAEFILTVMGAIIGPGNVWRFPYLCYRNG
GGVFFIPYTLFMITCGIPLFFLETSLGQYTSQGSVTCWRRICPLFQGMGYASHLIIAFSA
TSYIIIIAWAFFYLFLSFSAELPWASCGHEWNTDSCLDINHPNQSLSMTSRRNTTLPVVE
FWERRVLKISSGIEDVGSLRWELVLCLVLSWVICYFCIWKGIKSTGKAAFFTATFPFVML
FVLLIRGVTLPGAIDGIIYYLYPDISRLSDPQVWMDAGTQIFFSYAIGLGFLTSLGSYNT
YNNDCYRDCFYLCLLNSATSIVSGFAIFSVLGFMTKEQGVDISEVAQSGPGLAFIVYPRA
VAMMPMPQVWSVCFFLMIILLGLDSQFVGLECMMTSITDLFPTYLRQGHRRELVLLAICS
VCCLLGLSLVTEGGMYLLHLLDHHVCSGTTLLILSLFQSVSIAWVYGADRFYGNITDMIG
YRPYPFMKYCWRYITPCFCFGTFIFSIVKYTPLKFSSAYVYPLWANILGWFIATISLSLI
PLFMVYKIIQGKGTLRQRFLLLCQPVDLALDQKGFSTKGLAAITELKPLSYNVELTQGAQ
LLDFHHE
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggaaataatggaacctgcacagtttcgtcggaaaacaaacctccaccgacgcct
aaagagtcggaaggacggggtcattggggcagtaaagccgagttcatcctgaccgtgatg
ggcgcaataatcggacctggtaatgtgtggcggttcccctacttatgctacaggaacggc
ggaggcgtgttcttcataccatacacgttgttcatgattacgtgcggaatacccttattc
ttcctcgagacttccttgggacaatacaccagccaggggagtgtaacgtgctggagaaga
atttgtccgcttttccaaggcatgggctatgccagtcacttaatcatagcattcagtgcc
acctcctatatcatcatcattgcgtgggccttcttttacctgttcttgtccttcagcgcg
gagttaccttgggcgtcatgtggacacgagtggaacacggactcatgtctggacatcaac
catccaaatcagagcctcagcatgacatccagacggaataccactcttcctgttgtggag
ttctgggagcgccgggttttgaaaatctctagcggcattgaggatgtcggtagcttgaga
tgggagctggtcttgtgcctcgtcctgtcttgggtcatctgctacttttgcatttggaag
ggcatcaagtcaacaggaaaggcggctttctttacagccacgttcccctttgttatgctc
tttgttttgctgatacgtggcgtaacactaccgggcgcaatagatggcatcatttactac
ctgtaccctgatatctcccgcctttcagatccccaggtgtggatggatgctggcactcag
atcttcttctcctacgccatcggccttgggttcctaacctctcttgggagttacaacacc
tacaacaacgactgttacagggactgtttctacttgtgtctactgaacagtgccaccagc
attgtgtcgggcttcgccattttctctgttctgggtttcatgaccaaggaacaaggggtg
gatatctctgaagtagcccaatcaggcccgggtttggcattcattgtctacccacgcgct
gtagccatgatgcccatgcctcaggtttggtccgtgtgtttcttcctcatgatcattctg
ctgggattggacagtcagtttgttggcctggagtgtatgatgacgtcaattacagatttg
ttccccacttacttgcgccaaggccatagacgcgagctggttctgctggctatctgcagt
gtctgctgtttgctgggactctccctggtcaccgagggaggaatgtacctgctccacctg
ttggaccatcacgtctgcagcggcaccaccctgctcatcctctcccttttccagtcagtc
agcattgcctgggtgtacggtgctgatcgtttctatggcaacataacagacatgatcggg
taccgtccgtacccttttatgaagtactgctggcgctacatcactccctgcttctgtttt
ggcaccttcatcttctccatcgtcaaatacaccccgctgaagttcagtagcgcctatgtt
tatccactctgggccaacatcttgggttggttcatagccaccatctcgctctccctcatc
cctctgtttatggtttacaaaataatccagggaaaagggactcttcgacagcgtttcttg
ctgctgtgccagccggtggacctcgccttggatcaaaaaggtttctccacaaagggcctc
gctgccattacagagcttaaacctttatcctataatgtggaactcactcagggagcacag
ttgttagatttccatcatgagtaa
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