Gasterosteus aculeatus (three-spined stickleback): 120821945
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Entry
120821945 CDS
T07457
Symbol
chrne
Name
(RefSeq) acetylcholine receptor subunit epsilon
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120821945 (chrne)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gat04040
]
120821945 (chrne)
Ion channels [BR:
gat04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
120821945 (chrne)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
SLATT_5
Motif
Other DBs
NCBI-GeneID:
120821945
NCBI-ProteinID:
XP_040037026
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Position
VII:20471163..20478505
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AA seq
517 aa
AA seq
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MAESRFWIFFGVVAVLGTLTARVQCNEESELIRDLFKGYNKNIRPVVHPEDKLTIQIKLT
LTNLISLNEKEETLTTNVWIEIQWVDYRFVWNTSNYHGIDVIRVPCKTIWLPDIVLENNI
DGKFDVAYYANVLISYDGSMYWLPPAIYRSTCAIEITYFPFDYQNCTLAFRSQTYSANEV
DLILAVGDEMETIEWVDIDPQAFTENGEWAIVHRPGRKMINPRYTPDDLEYQEILFNLVI
QRKPLFYIINIILPCSLISSLVVLAYFLPAQAGGQKLTVSISVLLAQTVFLFLIAQKIPE
TSLSVPLIGKYLIFVMSVTTLIATNQIVVLNFSLRSPSTHTMSNTIKHVFLEMVPRFLGM
PPLVDDTEVTTVVNGVRERRRSSFGLLQRAEEYVLKQPRSEMMFDKQRERHGLTRSIVDD
MDVSSTANLYKSLAQAAPEIKQCVDACNFIAESTRQQNSIGSEIESWVLIGKMIDKVCFW
AAISLFIIGTVWIFLTGHFNRAPEFPFPGQSKKYVPS
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaagcaggttttggatattttttggagtcgtagctgttctcgggactttaacg
gctcgggtgcagtgtaatgaggagtcggagctcatccgcgacttgttcaaaggctacaac
aagaatattcgcccggtggttcatcctgaagacaagctcacgattcagatcaagctgacc
ctcactaacctcatctccctgaatgaaaaggaggagactcttacgactaatgtctggatt
gagattcaatgggtggattatcgcttcgtctggaacacgtctaactatcatggcattgat
gttattcgtgttccgtgcaaaactatttggctccctgacattgtcctggagaacaacatt
gatggcaagtttgatgtggcttattacgctaacgtgttaatctcttacgatggttcgatg
tactggctgcctcctgctatctatcgcagcacttgtgccattgagatcacctacttccca
tttgactatcaaaactgcacgctagcattcagatcccagacgtacagtgccaatgaagtg
gacctcattctggctgtcggagacgaaatggaaacaattgagtgggtggacattgacccc
caggctttcacagaaaatggcgagtgggccatcgtccatcggccaggcaggaagatgatc
aacccgcggtacacccccgacgacctggagtatcaggagatcttattcaacctggtaatc
caaaggaaacccctcttctacatcatcaacatcattctgccctgctccctcatctcctcg
ttggtggtgctggcttacttcttacccgcacaagccggaggacaaaagttgaccgtgtcc
atctctgtcctgctggctcaaactgtcttcctctttcttattgcccagaagatccctgag
acatctctctcggtccctctcatcggcaagtacctgatcttcgtaatgtctgtcactact
ctcattgccactaatcaaattgtggtgctgaacttctccctgcgtagccccagcactcac
accatgtcaaataccatcaaacatgtgttcctggaaatggtacctcgcttcctcggcatg
ccccctctggtggacgacaccgaggtgacaaccgtggtgaacggcgtgagggagcggcgg
cgcagctcattcggcctcctgcagagggcagaggaatatgtactcaaacaacctcgcagt
gaaatgatgtttgacaaacaaagagagcggcatggtctcacgcggtccattgtggatgat
atggatgtcagcagcacggccaacctgtacaagagtttggcgcaagctgcacccgaaatc
aagcaatgtgtggatgcctgcaacttcattgctgagagtacgcgacaacagaatagcatt
ggatctgaaattgagagctgggtcctgattgggaagatgattgacaaggtgtgtttctgg
gctgccatttccctcttcatcatcggcactgtgtggatcttcttaacgggacacttcaac
cgggcgcccgaatttccgtttccggggcaaagcaaaaaatatgttccgagttaa
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