Gasterosteus aculeatus (three-spined stickleback): 120822016
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Entry
120822016 CDS
T07457
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gat04040
]
120822016
Ion channels [BR:
gat04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120822016
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank_2
YVC1_C
Motif
Other DBs
NCBI-GeneID:
120822016
NCBI-ProteinID:
XP_040037208
UniProt:
G3QAM3
LinkDB
All DBs
Position
VII:20349550..20356208
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AA seq
993 aa
AA seq
DB search
MENLTPEQWREIMSRKMRFPPELIGAIQEGKIELLCGLLKTGDGIIRQLDESEDRQWREA
LNLSIRLGNESCMDALLQGVKFDFRQIHEALLVAVDTNQPRVVKRLLDRLDQEKGNKMDV
RSFSQAIFDHSIDNSQFAPGVTPLTLACQKDLYDIVTMLTKKGHIIPWPHKISCACLECR
NGRQYDLLKFSLSRINTYRGIASRAYLSITSEDAMLRAFSLSRELRKLSQKEPEFKPQYL
GLEELCQEFAVELLGMCRNQSEVTTILNSCGDESQDSLEEQAFEEGIPNLSRLRLAVNYN
QKQFVAHPICQQVLSSIWCGNLAGWRGSRTAWKLLVSLGIFFTMPFLCLVYWIAPKSKFG
KVIKTPVIKFLLHSASYLWFLITLLGESMAMEIHQGKFSSRQQNMLHSSFHMVWVVGFFW
YECKEVWIEGLRCYFLDWWNCLDVMVLSMYLASFALRLLIMLKGYFLCRDLDGADECTYF
TQTERKDWHQEDPQLIAEVLFAVTSMLSFTRLAYILPAHESLGTLQISIGKMIDDMMRFM
FILMIIGTAFLCGLNNVYVPYAISPHLGRFNETFHFLFWTMFGVANQDYVDMPQFALAEF
VGRVLYGIFTLVIVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGLTIPV
PFNIIPSPKAVFYILRCIFRQICCCCTFNSENKYPDLPSMSKDKVSEGSQLPYRQQVIRA
LVQRYIESARREFEETKRKDIGNRITSLTKTVTRMHSDMKVLHQVLMDDGRAASDALTRD
GSSFLGKYIVGAKNNFVGFNSKLDEKNTSLEVTVHHGGGGVETEGSKDETDRDVMEMEEG
RAKIEPGEEKESENKKQVEADKTEVKEVVVAGKSFNHSEEKQKEEDEAEGRRAGEILPKH
TEKTSQKAQGNKVNNEETDIKKVANKVKDVELREQKVGSEWRNDGAFEPDGPKKSGVSQS
NATPAAKKTIPSPTGSSSSHDTGFSDDGAIVTP
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atggagaacctcacgcccgaacaatggcgcgagatcatgagcaggaagatgcgcttcccc
ccggagctcatcggggccattcaagaggggaaaatagagctgctgtgtgggctgctgaag
accggcgacggcatcatccgccagctggatgagtccgaggatcgccagtggagggaagct
ctcaacctgtccatccgcctgggcaacgagagctgcatggacgccctcctgcagggggtc
aagtttgacttccggcagattcacgaggccctgctcgttgctgtagacaccaaccagccc
agagtggtgaagcgcctgctggaccgcctggaccaggagaaaggcaacaagatggacgtg
cgctccttctcccaggccatctttgaccactccattgacaactcccagtttgcccccggt
gtgactcctctgacgttagcctgccagaaagacctgtatgatatcgtgaccatgctcacc
aaaaagggtcacatcatcccgtggccgcataagatatcctgtgcgtgtctggagtgtcgc
aacggccggcagtacgaccttctgaagttctccttgtctcgcatcaacacctaccgtggc
atcgccagccgcgcctacctctccatcacctctgaagacgccatgctcagagctttcagc
ctcagcagagagctccgtaagctctcgcagaaagagccggagttcaagcctcagtatctg
ggcctggaggagctttgccaggagtttgccgttgagttgctgggcatgtgtcgcaaccag
agcgaggtgaccaccatcctgaacagctgcggagacgagagccaggactctttagaggag
caggcctttgaggagggaatccccaacctgtcccgtctgcgtcttgccgtcaactacaac
cagaagcagtttgtggcccacccaatctgccagcaggtgctgtcatctatctggtgtggg
aacctggcaggctggagaggcagcaggacggcctggaagctgcttgtatccttggggatc
ttcttcacaatgcccttcctctgcctcgtctactggatcgcaccaaagtcaaagtttggg
aaggtaataaagactcctgtgatcaagtttctccttcactctgcctcctatctgtggttt
ctcattacgttactcggagaatcgatggcaatggagattcatcagggcaaattttcatcc
cggcagcagaacatgctgcacagctccttccacatggtgtgggtggtcggattcttctgg
tacgagtgtaaggaagtgtggatcgaggggctgcggtgctacttcctggactggtggaac
tgcctggatgtgatggtgctcagcatgtacctggcgtcttttgcgctacgtttgcttata
atgctcaaaggttacttcctctgccgtgacctcgacggcgcagacgagtgcacctacttc
actcagaccgagcgcaaggactggcatcaggaggacccgcagctgatcgcagaggtgctg
tttgccgtgacgagcatgttgagcttcacgcggctggcgtacatcctgccagcgcacgag
tccctggggaccctgcagatctccatcgggaagatgattgacgacatgatgagatttatg
tttatactgatgatcattggaacggccttcctctgtggcctcaacaatgtctatgttcct
tatgccatctctccacatcttggcaggtttaatgagacgttccacttcctcttttggacc
atgttcggcgtggccaaccaggattatgtggacatgccacagtttgcgttggcggagttt
gtcggaagggtgttgtacggcatcttcacgctcgtcatcgtcattgtcctgctcaacatg
cttattgccatgatcaccaactcctttcagaaaattgaggacgatgcagatgttgagtgg
aaatttgccagatcgaagctgtaccttagttacttcagagaagggctcaccattcctgtg
ccctttaacatcatcccctcccccaaagctgtgttttacatattaaggtgtatcttcaga
caaatctgctgctgctgcacttttaattctgaaaacaaatatccagacctgccatccatg
agcaaagataaggtatctgaaggcagccagttgccttaccgccagcaggtgatcagagct
ctggtgcaacgctacattgaatcggcacgcagggagtttgaggagacaaagaggaaagat
atcggaaatcggatcacttcgctgaccaaaacggtcaccagaatgcacagtgacatgaaa
gtgctccaccaggttttgatggatgacggacgcgctgcaagcgacgcgttgacaagagac
ggctcctcctttctgggaaaatacattgttggtgccaagaacaatttcgtaggttttaac
agcaaactagatgagaaaaacacctcacttgaagtgacagtgcaccatggaggaggaggg
gtcgagacagagggatcgaaggacgaaacggatcgggatgtgatggaaatggaggaaggc
agagctaaaatagaaccaggagaagagaaggaaagtgagaataaaaagcaggtggaagca
gacaaaactgaagtaaaggaggtagtggtggcagggaagagttttaatcattcagaggag
aagcaaaaagaagaggatgaagcagaaggaagaagagcgggcgagatactccccaaacac
acagagaagacctcccaaaaagctcaaggcaacaaagtcaacaatgaagagacggacata
aagaaagtggcgaacaaggtcaaagacgtagagctgcgagaacaaaaagtggggtcagaa
tggaggaatgatggcgcatttgaacccgatggaccaaagaagtctggtgtcagccagagc
aacgcaacacccgcagccaagaaaaccattccctcgccaacgggcagcagcagctcccac
gacacgggcttcagtgatgacggggcgatagtgactccatag
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