Gasterosteus aculeatus (three-spined stickleback): 120822029
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Entry
120822029 CDS
T07457
Symbol
dscamb
Name
(RefSeq) Down syndrome cell adhesion molecule homolog isoform X1
KO
K06767
Down syndrome cell adhesion molecule
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gat04515
]
120822029 (dscamb)
Cell adhesion molecules [BR:
gat04515
]
Immunoglobulin superfamily
DSCAM family
120822029 (dscamb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
V-set_CD47
Sp38
fn3_2
C2-set_3
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
120822029
NCBI-ProteinID:
XP_040037232
LinkDB
All DBs
Position
I:complement(4788928..4879479)
Genome browser
AA seq
2078 aa
AA seq
DB search
MWILAFIFFQSILNVFSEDLHSSLYFVNASLQEVVFASTTGTSVPCPAGGAPPASLRWYL
ATGEEIYDVPGIRHVHPNGTLQIFNFLPSSFSKLIHDNTYYCTAENPSGKIRSQDVHIKA
VSREPYTVRVADQKAMRGSVAVFKCIIPASVEAYVTVVSWEKDTVSLNSGQRHLITSTGA
LYILDVLPEDGLNNYRCTTRHRYTGETRQSNSARLIVSDPTNAEPGILDGFDQREVMINH
RVELPCKASGYPTPKYRWLKDNSPLEPDSRFRQTTTGLLIESTQPSDSGTYVCEVWNIYG
NAEVMGRLYVKQPLKAVVSPRKVKGSVGSKVSLSCSVSGSDEYELSWYRNGEIIYPGNNV
RFTGLNRENLIMEGMSKSDGGAYQCFARKGKMSAQDFVHVILEDGTPKILSSFSEKVVNP
NEPVFLVCNVKGTPPPRCSWSLDDDPVIKDTHHHLGHYETHEGHVVSQLNVTHTQVQDGG
VYRCTCSNSAGVVYHQARINVRGRANIRPMKNITAIAGRDAFVHCRVIGYPYYSIKWYKN
SALLPFNHRQRAFENNGTLKLSNVQQVDAGEYNCKVMVQPNKMDSQSVHLRVRVPPYIQP
FEFQRFTIGQRVFIPCVVMSGDRPLDITWQKDGRPIPVSLGVTVDNIDFTSSLRISNLTP
DHNGNYTCVARNEAAAVEHQSQLIVRVPPQFVVQPEDQDGIYGKTVTLNCSAEGYPPPTI
VWEHSKGAGVPQFQPIQLNSGSRVQLLSNGSLLIKHVLEDDSGFYLCKVSNDVGADVSKS
MYLTVKIPAMITSYPNTTLATQGEEKKMSCIAHGEKPIMVRWEKEERIINPETSRYVVTV
KEVADEVVSTLVIMPTVREDSGFFSCHAINSFGEDRGIIQLTVQEPPDPPEVEIREVKDR
TIALRWTMGFDGNSPITGYDIECKNKSASWLSAQVTKDVSPQLNQATIIDLHPSSTYNIR
MVAKNIIGNSNPSNELTITTDEAAPDGPPQDVTLDPTSPQSIKVSWKPPQKHLQNGVIRG
FQVGYREYSPGGSHQFIIISLDTTGDTTESIVLDNLKKFTQYSVVVQAANRAGTGPSSQQ
VVTKTLEDVPSRPPENVLAVAKSPEVISLSWMPLPREALNGNLQGYRVIYWANLPDGELG
EIRNVTTNQPSLELDGLEKYTNYSIQVLAFTNAGDGVRSEQIYVRTKEDVPGPPAGVKAA
ASSSSVVFVSWLPPLKLNGIIRKYIVFCSNLHPMVIVMSEFEASPDAFFYRIPNLARNRQ
YSIWVVAVTAAGHGNNSEKITVEPLAKAPARILTFNGTVTTPWMKDIVLPCKAVGDPPPT
IKWLKGNTNGTPTPVLVDGRRSVHGNGSFIIRTVKAEDSGNYSCVASNNWGSDEITLNLQ
VQVPPDQPRLTVTKTTTTSITLSWIPGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERS
YRLENLKCGTWYKFTLTAQNAVGPGRISEIIEAKTHGKEPQFAKDHELFTSINSTRARLN
LVGWNNGGCPITSFILEYRAVDSATWTTAQRTSLTKSYVLYDLQEATWYELQMKVTNSAG
SAEKRITFATLNADGSTIPPLLKTGDPISDNMSGSGGLKMVVTITSVLVVAVLVFIMLMV
LKRRRREQRLKRLRDAKSLAEMLMSKNTRTPDTVNKQQQTLRMHIDIPRAQLLIEERDTM
ETIDDRSTVLLTDNDFGETNKQKSSTVTHTVHYQSLSQATGPLVDVSDARPGTSESHHHP
TARRTAKAGPVAARSRYASQWTLNRPHPTSSSHTLTTDWRLPTPRATGSVDKESDSYSVS
PSQDTDRARSSMVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQMTA
GTNDYTDSVTSSTPSESGICRFTASPPKPQDVSRVMTMAVPKAHRPGGELVHLPPYLRMD
FLLNRGVPLAARGGGVSSSSGSSSSGGGGAGGAGAGATGETRGAGGGGGGGGAMGQTCLE
PQRSRTLKRPPPMEPTPMEVPSPREVQQWQPGTASTLPHRDVRERGEARGEVRAEAPSSG
DLAQAQAAKLSTSQESLLDSRGHLKQSNNPYAKSYTLV
NT seq
6237 nt
NT seq
+upstream
nt +downstream
nt
atgtggatattggcttttatcttcttccagagcatcttgaatgttttcagtgaggactta
cattccagcttatattttgtcaatgcatctttgcaagaggtagtatttgccagcaccaca
gggacctccgtgccctgtcctgctggtggcgccccgcctgcctcgctgcgctggtatctg
gcgaccggcgaggagatctacgatgtcccaggcatcaggcacgtccaccccaacggaacc
ctccagatcttcaacttcctgccatccagcttcagcaagctgatccatgacaacacgtac
tactgcactgccgagaacccctctggcaagatcaggagtcaggatgtccacatcaaagct
gtttcacgggaaccctacacggtcagagtggccgaccagaaggccatgagaggcagtgta
gccgtcttcaagtgcattatccctgcttcggttgaggcctacgtcactgttgtatcatgg
gagaaagacacagtttcactcaactcaggacaaagacatctcatcacatccacgggggcc
ttgtacattctggacgtgctgccggaggatgggctgaacaactatcgctgcaccacacgc
caccgctacaccggcgagacccggcagagcaacagcgcgcgcctcattgtgtcagacccc
accaatgctgagccaggcatcctggatggctttgaccagcgggaggtgatgatcaatcat
cgggtggagctgccctgcaaggcctcgggctacccgacgcccaaataccgctggctgaag
gacaacagccccctggagcctgacagtcgctttcgccagaccaccacggggctgctgatc
gagagcacgcagcccagtgactctgggacgtatgtttgtgaagtgtggaacatttatggc
aacgctgaggtgatgggacgcctgtatgtcaaacagcccttgaaggcggtggtcagccct
cgcaaggtgaagggcagcgtgggcagcaaggtgtctctgtcctgtagcgtgagcggctca
gacgagtatgagctgtcgtggtaccgcaacggggagatcatctaccccggcaacaacgtg
cgtttcaccgggctgaaccgggagaacctcatcatggagggcatgtcgaagagcgacggc
ggagcctatcagtgcttcgccaggaagggcaagatgtcggcgcaggactttgtgcacgtc
atcctcgaagacggcactcccaagatactgtcctccttcagcgagaaggtggtgaacccc
aacgagcccgtcttcctggtgtgcaacgtcaagggcacgccgcctcccaggtgctcctgg
tcgctggacgacgaccccgtcatcaaagacacccaccaccacctgggccactacgagacc
cacgagggccacgtggtcagccagctgaacgtcacacacacccaggtgcaggacggcggg
gtgtaccggtgcacgtgcagcaactcggccggggttgtgtaccaccaggctcgaataaac
gtaagaggtcgcgcaaacattcgtccgatgaaaaacatcacggcgatcgccgggagggac
gcgttcgtccactgccgcgtgatcggctacccttactactccatcaagtggtacaaaaac
tcggcactgctgccgttcaatcaccgacagcgagcgttcgagaacaacggcacgctgaag
ctgagcaacgtgcagcaggtggacgctggcgagtataactgcaaggtgatggtgcagccc
aacaagatggactcccagagtgtccatcttcgagtgagagtgcctccctacattcagccc
tttgagttccagcgattcaccatcggccaacgcgtcttcatcccctgcgtggtcatgtcg
ggcgaccgtccgctggacatcacctggcagaaagacggacggcccatccccgtcagcctg
ggtgtgactgtggacaacattgacttcaccagctcattgagaatctccaacctcacgccc
gaccacaacggcaactacacctgcgtcgcccgcaacgaggctgctgcagtggagcaccag
agtcagctcattgttagagttcctcctcagtttgtggttcagcctgaggaccaagatggg
atctatgggaaaacggtgactctgaactgctcagctgaaggctaccctccacccaccatc
gtatgggaacactccaaaggcgcgggcgttccccagtttcagcccatccagctcaacagc
ggatctcgtgtgcagctgctgagcaacggctcgctgctgatcaaacacgtgctggaggac
gacagcggcttctacctgtgtaaggtcagcaacgacgtgggagctgatgtcagcaagtcc
atgtacctcaccgtgaaaatcccggccatgatcacctcctaccccaacaccacgctggcc
acgcagggcgaggagaagaagatgagctgcatcgctcacggggagaaacccatcatggtg
cgctgggagaaagaagagcgcatcatcaacccggagaccagccggtacgtggtcaccgtc
aaggaggtggccgacgaagtcgtctcgacgctggtgatcatgccaaccgtgcgtgaggac
tctggtttcttctcctgtcacgccatcaactccttcggcgaggaccggggcatcatacag
ctgacggtgcaagaaccgccagaccctccagaggtggagatccgcgaggtgaaagatcgg
accatagctctccgctggaccatgggctttgacggcaacagccccatcacaggatatgat
attgaatgcaagaacaaatcagcctcgtggctttcagcccaggtgaccaaagatgtgtca
ccgcagctcaaccaggccacgattattgaccttcacccttcctccacttacaacatccgc
atggtcgccaagaacatcatcggcaacagcaaccctagcaacgagctcaccatcaccacc
gatgaagcagctcctgacggcccgccgcaggatgtcactctggatcccacctccccacag
agcatcaaagtgtcctggaagccgccccagaagcacctgcagaacggtgtgatccgcggc
ttccaggtgggctacagggagtacagccctggtggcagccaccagttcatcatcatcagc
ctggacaccacaggagacaccacggagagcatcgtgctggacaacctgaagaagttcact
cagtacagcgtggtggtgcaggctgccaacagggccggcaccgggccttcctcacagcaa
gtcgtcaccaaaaccctggaggatgtgccgtcccggccacccgaaaacgtcctggctgtg
gcgaagtcccccgaggtcatctcgctctcctggatgcctctacccagagaggctctcaat
ggaaacctgcagggatacagagtcatctactgggccaacctgcccgacggagaactggga
gaaatccggaatgtgaccaccaatcagccgtctctggagctggacggattggagaagtac
actaattacagcatccaggtcttggccttcaccaacgctggagacggggtccgcagcgag
cagatctacgttcgcactaaagaggatgttcctggtcctccagcgggggtgaaggctgca
gcatccagcagctccgtggtgttcgtctcctggcttcctcccctcaaactcaacggcatc
atcaggaaatacatcgtcttctgctctaacctgcatcccatggtaatagtgatgagcgag
tttgaggcctctccagatgcgtttttctacaggatccccaacctggcgcgaaacaggcag
tacagtatctgggtggtggctgtgacggctgccggacacggcaacaacagtgagaagatc
acagtggagcctctggccaaagctccagccaggatcctgacgttcaatggaacagtgacc
actccctggatgaaggacatcgtgttgccatgcaaggccgtcggagaccctcctcccacc
atcaagtggctcaagggaaacaccaatggaactcccacacctgtccttgtggacggtcgc
cgtagcgtccacggcaacggcagcttcatcatccgcacggtgaaagcagaggattctggc
aactacagctgtgtggccagcaacaactgggggtcagatgagatcacactgaacctgcag
gtccaagtccctcctgatcagccgcgcctcacagttaccaagacaaccaccacatccatc
acattgtcatggatccctggagacaacggagggagctccatcagaggttacatcctgcag
tactcagaggacaacagtgagcagtggggcagttttcccatcagccccagtgagcgctcc
taccgcttggagaacctgaagtgcggcacctggtacaaattcactctgacggcccagaat
gcagtggggccggggcgcatcagtgagatcattgaagctaagacccacgggaaagagccg
cagtttgccaaagatcacgaactcttcaccagcatcaactccactagggccaggctcaac
ctggtcggctggaacaacggcggctgtccgatcacctccttcatcctggagtaccgagcg
gtggactcggccacctggaccacggcccagcgcacgtcgctgaccaagagctacgtcctg
tacgacttgcaggaggcgacctggtacgagctgcagatgaaggtcaccaacagcgccggc
tcggcggaaaagaggatcacctttgccactctcaatgcagacggaagtaccatccctccc
ctgctgaaaactggagaccccatctcagacaacatgtccggcagcgggggtctgaagatg
gtggtgaccatcacctctgtcctggtggtggccgtcctggtcttcatcatgctcatggtg
ctgaagaggagacggagggagcagaggctcaagagactccgagacgccaaaagcctggca
gaaatgctgatgagtaagaacacgcggactccagacaccgtgaacaagcagcagcagaca
ctccgaatgcacatcgacatccccagagcccagctgctcatcgaggagcgggacaccatg
gagacgatcgatgacaggtccactgtgctgttgacagacaacgactttggggagacaaat
aagcaaaagtcctccacagtgacccacacagtccactaccagtctctgtcccaggccact
ggaccactggtggacgtgtccgacgccaggcctggaaccagtgagtcccaccaccatccc
actgccagacgcactgccaaagcgggtcccgtggcggcacgcagccgctacgccagccag
tggaccctgaaccggcctcaccccaccagctcctcgcacacgctgaccacggactggagg
ctgcccacgccgcgcgccaccggatccgtggacaaggagagcgacagctacagtgtcagc
ccctctcaggatacagatcgtgcgcggagcagcatggtgtcgaccgagagcgcgtcctcc
acctacgaggagttggccagagcctacgagcacgccaagatggaggagcagctccgccac
gccaagttcaccatcaccgagtgcttcatttctgacacgtcgtcggaacagatgacggca
gggaccaacgactacaccgacagcgtgacctccagcacgccgtccgagtcgggcatctgc
cgcttcaccgcttcgccgcccaaacctcaggatgtcagccgggtcatgaccatggcggtg
cccaaggcacacagacctgggggagagctggtccacctgccgccttacctacgcatggac
ttcctgttgaaccgcggcgtgccactggcggcccgaggaggaggggtcagcagcagcagc
ggcagcagcagcagcggaggaggaggtgcaggtggagctggcgctggtgctacgggggag
acaagaggagcgggaggaggtggaggaggaggaggagccatgggccagacctgcctggag
ccccaaaggagccgcacgctgaagaggcccccccccatggagcccacccccatggaagtg
ccgtcacccagggaggtgcagcagtggcagccggggactgcctccaccctcccccacagg
gatgtccgggagaggggagaggcccggggggaggtccgggcagaggccccctcctcggga
gacctcgcccaagcacaggctgccaagctcagcacctcccaggagtccctgctggactcc
agaggacacctgaaacaaagcaacaacccctatgccaagtcttacactctggtataa
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integrated database retrieval system
