Gasterosteus aculeatus (three-spined stickleback): 120822043
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Entry
120822043 CDS
T07457
Symbol
med13a
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13a
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gat03021
]
120822043 (med13a)
Transcription machinery [BR:
gat03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
120822043 (med13a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
HdrB-like_C
Motif
Other DBs
NCBI-GeneID:
120822043
NCBI-ProteinID:
XP_040037264
UniProt:
A0AAQ4QP92
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Position
VII:complement(16602991..16665890)
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AA seq
2168 aa
AA seq
DB search
MSSCYVPNGASLEDCHSNLFCLADLTGIKWKRFVWQGPTSAPILFPVTEEDPILCSFSRC
LKADVLSVWRRSQRPGRRELWLFWWGDDPNFADLIHHELAAEDDGLWENGLSYECRTLLF
KAIHNLLERCLMNRSFVRIGKWFVKPYEKDEKPINKSEHLSCAFTFFLHGESNVCTSVEI
NQHQPVYHLTEEHLTLAQQSSSPFQVILSPFGLNGTLTGQSFKMSDPPTKKLIEEWNQFY
PISPSAKDGVSEDKAEDMDWEDDCLASVEVLVGGVRMLYPACLVLVPQSDIPVVAPVGSS
HCTAVYSGGHQVPASQREPAMSLVTLTPPTSPEEAHTVDSHLAQKWVKMPSSSDAFTVDT
TSHHGGKIPRRQASQVVERVWQECNIDRAQNKRKFSAATNGTCEEERAEKAGAWDFVKHS
QRSYCNCSRYKSVKQRTASTPGQTPSVGQTCQTPTKHKAGGEKPEKGDKLQKRPQTPFHH
RSLTSDDVSMEAEASAGQRLAMTGQDGGRFPSIRSTDVSSIQKASQLHSGGISAGPSEQA
NSPQPPPLSPHPCERGEESVEGMKNPSTPNSQHFYQLPPEPCLVGVKGGSEGHGGPEGLN
QHFHSHHPHSHPGASTYSDPPEPTVYVSAAVNLEEDGTHSPWRLFNLPRRKEAELPTPLL
PWDKLRDEPLSSQDNLVSVTEVMSTSKWPLKVSEERVQMYRARRNQFLSAAITDGDHEPE
VDPYAFEEGDVKFTFSNKKDKAGGEREPGKKHKGEDGGAGTSDDAQRAAAHNRMASTSLI
HETDLVVSINDLDNLFNSDEDESAPGSRRPVNGTDERFAGKEPKPSTLDPVSCISSADLH
QMFPTPPSLEQHIMGYSPMNMFSKEYSMEANTGMTMLDGTSSLGGHFKIEVEESFCSPKP
CEIKDYSFVYKPELCQPFVGCSMFAPLKALPSQCLPPVKIPEDCIYRPSWTMGREMLNPV
PVMTFLNKDCNIPSVGSTMDQDYNQTYTPQTHTPFISNSAPPSNSGAGILPSPATPRFSA
PTPRTPRTPRTPRGPSSVQGSLKYENSDLYSPASTPSTCRPLNSVEPATVPSIPEAHSLY
VTLILSESVMNLFKDCNFDSCCICVCNMNIKGADVGVYLSDPVGEAQDPCSCGFSAMVNR
RYGNGSGLFLEDELDIIGRGSDVSREAEKRFEALRLSSLERTGVGRGDRVPDEVILLLQD
QCTNPFSPISILEHDIVSRGPSGAPVPPCVRVEERDYHSDCYMALEHGRQFMDNMSGGKV
DESLVKSTCLHHWGKQNAVDVTALCSQDVLRVLMSLQPILQDAIQKKRTVRSWGVQGPLT
WQQFHKMAGRGSYGTDESPEPLPIPTFLVGYEYDFVVLSPFGLPYWEKLLLDPFGSQRDI
GYLVVCPDNEALLSGAKGFFRDLTAVYESCRLGQHRPISKGYPDGIVLVGGNGANNLVDQ
PVSDWFLKAASSNSEAFTKLKLYAQVCRHNLAPYLASQPLDSSLLTQPSLPPSSSQSPST
QLSSSTSSSVGQQGSVNAAGSSVHNSNNNTTSSNNTGSGNGTASSNSLVTSLGQPCSGTP
SAKPSSFPPFGSTQSQGGGPQSGQLGQQAGTLNTGTSGENSSSQSQGPTEPPESTLERDK
IGMPTDGESHAITYPPAIVVYIVDPFSYDEADGGPGPVPAHSSVWTLGLLRCYLEMLQFL
PPHIRNSISVQIVPCQYLLQPVRGEDRHIYAQHLKSLAFSVFAQCRRPLPTSTNVKSLTG
FGPGLAIDTALKSPERPECLRLYTPPFILAPVKDKQTELGETFGEASQKYNVLFVGYCLS
HDQRWILATCTDLYGELLETCIINIDVPNRARRKKGSVRRLGLQKLWDWCLGLVQMTSVP
WRVVIGRLGRIGHGELKDWSILLSRRNLQSLSRRLKEMCRMCGISASDTPSILSVCLVAM
EPQGSFIIMPDSVSTGSVFGRSTTLNMQTSQLNTPQDTSCTHILVFPTSAFVQVASSNYT
NIDPNIDILNGTSDGIFDLLDQENELVDPDIINISPNTSPVHSPGSHYHHGGDGSKGQST
DRMESHEEVPNLLQQPLALGYFVSTAKAGPLPDWFWSACPQAQNQCPLFLKASLHLHVSS
VQSDELLHSKHSHPLDSNQTSDVLRYVLEQYNALSWLTCDPATQDRRSCLPIHFVVLNQM
YNFIMNML
NT seq
6507 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttgttatgtaccaaacggggccagcttggaggattgccattccaatctattc
tgtctggctgacttaacagggatcaaatggaagaggtttgtgtggcagggtcccacctct
gcgcccatcctcttcccagtgaccgaggaggaccccatcctatgcagcttcagccgttgc
ctgaaggccgacgtgctaagcgtatggcggcgcagtcagcggccggggcggagggagctt
tggctgttctggtggggggacgaccccaacttcgccgacctcatccaccacgagcttgca
gccgaggacgacgggctgtgggagaacggactttcctacgagtgtcgcacactgctgttc
aaagccatccacaacctgctggagcgctgcctcatgaatcgcagcttcgttcgcatcggc
aagtggttcgtcaagccgtacgagaaggatgagaagcccatcaacaaaagtgagcactta
tcgtgtgccttcacattcttcttgcacggggagagcaacgtgtgcacgagtgtggagatc
aaccagcaccagcccgtgtaccatctgaccgaggagcacctcactctggcccagcaatca
tccagtcccttccaagtgatcctgagtccttttggcctgaacgggacactgactggccag
tcgttcaagatgtcagacccgcccaccaagaagctgattgaggagtggaaccagttctat
cccatcagcccgagcgccaaagatggtgtgtcggaagacaaagcagaggacatggattgg
gaggatgactgtctggcctctgtggaggtcctcgtaggtggtgtgcggatgctgtaccca
gcctgccttgtgctggtgccccagtcagacatccctgttgtggcccctgtggggtcctcc
cactgcactgccgtatactcgggtggccaccaagtgcctgcttcccagcgagagcccgcc
atgtctttggtgaccctcacccctcccacatcgcctgaggaggcacatacagtggactct
cacttggcccagaagtgggttaagatgccttcatcgtctgatgcgttcactgtggataca
acaagtcaccatgggggcaagattccacggcggcaagccagtcaggtggtggagcgcgtc
tggcaagagtgcaatatcgaccgagcccaaaacaagcgaaagttctcggccgcaaccaac
ggtacctgcgaggaagagcgggctgagaaagcgggagcctgggactttgtgaagcattca
cagaggtcatactgcaactgttccagatacaaatcagtgaagcagagaacagcgagcacc
ccaggccaaactccgtcagtgggacagacctgccagacgcccaccaagcacaaagcaggg
ggagagaagccagagaaaggtgacaagctgcagaaaagaccgcagacacctttccatcat
cgcagcctgaccagtgatgacgtgtcaatggaggccgaggcatcagctggccaaaggtta
gccatgacgggccaggacggaggaagattccccagtatacgctccacggatgtgtccagc
atccaaaaagcctcccagctccacagtgggggcatcagcgctgggccgtcggaacaggcc
aattctccccagcccccgccacttagcccccacccctgcgagcgtggcgaggagtcggtg
gagggcatgaagaacccttcaaccccaaacagccaacacttttaccagctgcccccggag
ccctgcctggtcggggtgaaggggggcagcgagggacacggagggccagagggcctgaat
cagcacttccactcccatcacccccactcccaccctggggcttcaacttactccgacccc
ccggagcccactgtgtatgtgagcgcagcggtcaacttggaggaggacggcacccactca
ccatggcggttattcaacctaccgcgcaggaaagaagccgagctgcccacgccattgctg
ccatgggacaagctaagggacgagcccttgtcatcacaggacaacctggtgtcagtcaca
gaggtgatgtccacgtctaaatggccccttaaggtgtctgaagaacgtgtccagatgtat
cgagccaggaggaaccagttcctatccgctgccataacagacggggatcatgagccagag
gtggacccctacgccttcgaggaaggagatgtcaagttcacattctccaacaagaaggat
aaggcgggcggggagcgggagcccggcaagaaacacaagggcgaagatggaggagctggt
acatcagatgatgctcagcgggcggccgctcacaaccgcatggcttccaccagcctgatc
cacgagacagacctggtggtgtccatcaacgacctggacaacctcttcaattcggacgag
gatgaatcggcgcctggttcccggcgaccggtgaatggaacggatgagagatttgccggc
aaggaaccgaagccatctactttggaccctgtatcctgcatcagctcagcagatctgcac
cagatgtttcccacgcctccctccctagaacagcacatcatggggtactcacccatgaac
atgtttagcaaggaatacagcatggaggccaacacgggcatgacaatgctagacggcacc
tcatctctgggaggccacttcaagattgaggtggaggagagcttctgcagtcccaagcca
tgtgagatcaaggactattcatttgtatacaagccggagctgtgccagccattcgtaggc
tgctccatgtttgccccactgaaggcgctacccagccagtgtctcccgccggtcaaaata
ccagaggattgcatttaccgaccaagctggaccatgggcagggagatgctcaaccccgtg
ccggtcatgaccttcctcaacaaggactgtaacatccccagtgtgggcagcaccatggac
caggactacaaccagacctacacccctcagacccacacgcctttcatatccaacagtgct
cctccaagtaacagtggcgctggcatcctgccttcacctgcaaccccacgtttctctgcc
cccaccccacgcacgccacgcaccccacgcacgccccggggcccctccagcgtccagggc
tcgctcaaatatgagaactccgacctgtactcgccagcgtccaccccctccacgtgccga
ccgctgaactcggtagagccggccaccgtgccctccatccccgaggcccatagcctctac
gtcaccctcatcctctccgagtcggtcatgaacctcttcaaggactgcaacttcgacagc
tgctgcatctgcgtgtgcaacatgaacataaaaggagccgatgtgggcgtgtacttgagt
gaccccgtcggcgaggctcaggacccctgcagctgcggcttcagcgccatggtcaatcgg
cgttacggcaacggctcgggcctcttcctggaggatgagctggatatcatcggccgcggc
tctgacgtcagcagagaggcagagaagcgctttgaggccctgcggctctcctcgctggaa
agaactggagtagggaggggtgaccgtgtcccagatgaggttattctcctcctacaggac
cagtgcaccaaccccttttcacccatttcaatcttggagcatgacatagtgtcacggggg
ccaagtggggcccctgtgccgccctgtgtgagggtggaggagagggactaccacagcgac
tgttacatggccctggagcacggcaggcagttcatggacaacatgtcgggcggcaaggtg
gacgagtcgctggtcaagagcacctgcctgcaccactggggcaagcaaaacgcggtggac
gtgactgcgctgtgctctcaggatgtactgcgggtgctgatgtccctccagcccatactc
caggatgcaatccagaagaagaggacagtaaggtcgtggggcgttcagggtcccctaacc
tggcagcagttccacaagatggctggacggggctcttacggcacagacgagtccccagag
ccgctgcccatccctaccttcctggtgggttatgagtatgactttgtggtgctgtcgccg
tttggtcttccctactgggagaagctgttgctggatcccttcggctcccagcgggacatc
gggtacctggttgtttgtcctgacaacgaggccttgctcagcggcgcaaagggcttcttc
cgagacctcaccgccgtttacgagtcatgtcgactgggccagcaccgacccatttccaaa
ggctaccccgacggcattgtcctcgtcggcggcaatggggccaacaacctggtggatcag
ccagtcagcgactggttcctcaaggctgctagtagcaacagcgaggccttcactaagctc
aaactctatgcacaagtgtgccgacacaacctcgccccatacctcgcatcacagcctttg
gacagctccctcctcacacagcccagtctcccaccatcgtccagccagtcaccatccaca
caactgtctagctccacctccagctctgtcggccagcaaggctcggtgaacgctgcaggc
tcctctgttcacaacagcaacaacaacaccaccagcagcaacaacactgggtccgggaat
ggaaccgcgtcatcaaacagtctggtgacatccttgggccagccttgcagcgggacaccg
tctgccaaacccagctcttttcccccctttgggagcacccagagccaaggaggtggccca
cagagtggacagcttgggcagcaggctggcaccctgaatactggcacctcaggggagaac
tccagcagccagtcccaggggcccactgagcctccggaaagtactttggaacgagataag
ataggcatgcccacggatggggagtcccacgccatcacgtatcctcccgccatagttgtt
tacattgtggaccccttcagctacgacgaggccgacgggggcccagggccagtgccggcc
cactccagtgtgtggacgctggggttgctacgctgctaccttgagatgcttcaattcctg
cccccacacatccgcaattctatttctgtacagattgtcccgtgccagtacctgcttcag
ccggtacgaggggaagaccgtcatatctacgcccagcacctcaagtctctcgccttctct
gtcttcgctcagtgcagacggccgctgcccacctccaccaacgtcaagtcactgacgggc
ttcggccccggcctggccatcgacacggcactgaagagcccggagcggccggaatgtctg
cgtctgtatacacccccgttcattctcgcaccagtaaaggacaagcagacggagctcggg
gagacatttggggaggcgtcgcagaaatacaacgtgctgtttgttggatactgtttgtct
cacgaccaacgctggatcctggctacatgcactgacctgtatggggaactcctggagact
tgcatcatcaacatcgatgttcccaacagggcgcgcaggaaaaagggctctgttcggcgg
cttggcctgcagaagctgtgggattggtgcttggggctggtacagatgacgtcagtgccc
tggagggtggtgattggccgactgggcagaataggacacggagagttaaaagactggagt
attctgctgagcaggaggaacctccagtcactgagtcgccggctgaaggaaatgtgtcga
atgtgtggcatctccgcctcagatactcccagcatccttagcgtttgcttggttgccatg
gagccccagggatcatttatcatcatgccagactctgtgtcgacaggctctgtgtttggc
cgcagcaccaccttgaacatgcagacgtcccagctgaacaccccacaggacacctcctgc
acccacatcttggtcttccccacgtccgcctttgtccaagtggctagctccaattacacc
aacatcgacccaaacatcgacattctaaatggcaccagcgacgggatttttgacctgctg
gaccaggagaacgagttggtggacccagacataatcaacatctcccccaacacttcacca
gtacactcccctggctctcattaccaccacggcggtgatggcagtaagggccagagtact
gaccgtatggagtctcatgaagaggtcccgaacctcctgcagcagcccttagcactcggc
tactttgtctccacggcgaaagccggcccactacctgactggttctggtcagcctgtccg
caggcacagaaccagtgtccactcttcctcaaggcctctttgcacctccatgtgtcttca
gtgcaatcagatgaactactgcacagcaaacactcccatcccctcgactccaatcagacc
tcagatgtactcagatatgtgctggagcagtacaacgccctctcctggctgacgtgtgac
ccggctacacaggaccgacgatcatgtctacccattcactttgtggtgctcaaccagatg
tacaacttcatcatgaacatgttgtag
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