Gasterosteus aculeatus (three-spined stickleback): 120822051
Help
Entry
120822051 CDS
T07457
Symbol
si:cabz01101003.1
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase CYLD
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04217
Necroptosis
gat04622
RIG-I-like receptor signaling pathway
gat04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
120822051 (si:cabz01101003.1)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
120822051 (si:cabz01101003.1)
04625 C-type lectin receptor signaling pathway
120822051 (si:cabz01101003.1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gat01002
]
120822051 (si:cabz01101003.1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gat04121
]
120822051 (si:cabz01101003.1)
Enzymes [BR:
gat01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120822051 (si:cabz01101003.1)
Peptidases and inhibitors [BR:
gat01002
]
Cysteine peptidases
Family C67
120822051 (si:cabz01101003.1)
Ubiquitin system [BR:
gat04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120822051 (si:cabz01101003.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
120822051
NCBI-ProteinID:
XP_040037280
LinkDB
All DBs
Position
7:1996198..2003380
Genome browser
AA seq
968 aa
AA seq
DB search
MPGDHDQNRKRRPPKMFLISTDLKVQDQLDGTIVLQRGYMCQEQDSGRSRGDSPWVKVLD
NDLMLKIERKYLLEIPTDLNGLLEAVCEPEARFKLLGSPGKLQQMVALPVDSPLWVQMGS
QDELAEADLKYVGPLTRGSSAVWFGVQLKGRAAGRGISNGSFKGHRLFSCPDACALFLPV
SHIRLRHWSRNNSTGAHERDLQHPPHRSGAYNPPSNGHHSNNERPSPQQQQQQQQQHGRH
VSFQQQPGSPPQSPGAAVLSRTAEPSALAAQSQAPVRGPLHVGQRVCFPLESGVQGGEVR
FCGPLPGRPSSGPYVGVLLDAPVGNWDGVYKGEPLCHVPSALYGVLLPVSKVSPETKPHR
QNPPLQMTRPILKSAPPPATRPGPLSPPASAPKVALMPPGKAAPRPPPPPKPAHKAPPLP
PPKPRSPTTTPPQQQLHANGAHGPPSPLRSPGGSEGEEAGPRGELEVGSMVEVNEPPLFG
VIRWVGQIGGVPEPVAGIELDQELSAGTDGSYLGERHFRCPANKGLFVKLRNCRRDSRFP
APETPVNQVERCNSIAFAEWGSERVEEHTPPVDGGEAADLYQGSKRGIQGHLNSCYLDAT
LFSLFSCCSSADFVLFWPSDSDADSSRAQDLLRCEIVNPLRRNGYVCASKTMALRRLLEA
PNSDTGFTSQEKDPEEFLNRLFQLLRVEPLLKIRSMTRQPQEGHLYQLFPPTLPPSPRSP
SPSSSTLGSPAPLPSPSHMRVASVQALLESSFLHAGLKFVETPSCLLTAHVSGSGRTSKC
LTPILPTLSLDDTDLLDDALRQCSICQAVAEFECLQCYDDPDITPGHLKQYCQTCNTQVH
SHRKRASHVPASVAVPGGPWSGGQLCARQRMSLFAVTCIETSHYVSFVKHGPDAADWLFF
DSMADREGGENGFNIPRVKACPEVGRYLSLSQDQLRRVDPASLRESARRLLCDSYMCLYH
SPELSLYK
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccaggggaccacgatcaaaacaggaagcgccgcccccccaaaatgtttttgatctcg
accgacctgaaggtgcaggaccagctggacggtaccattgttctgcagcgggggtacatg
tgccaggagcaagactccggcaggagcagaggcgactccccttgggtcaaggtgttagac
aacgacttgatgttgaaaatagagaggaagtacctgctcgaaatcccgaccgacctcaac
ggcctgctggaagccgtatgtgaaccggaggctcgatttaaacttctaggtagtcccggg
aagctgcagcagatggtcgcgttgcctgtcgactctccgctgtgggtccagatgggctcg
caggacgagctggccgaggccgatctcaaatacgtcgggccgctgaccagggggagcagc
gccgtgtggttcggggtgcagctcaagggtcgggcagcaggtagaggaataagcaacggc
tccttcaagggccaccggctcttctcctgccccgacgcctgtgccctcttcctcccggtc
agccacatccgcctgcgccactggtcccgcaacaattccactggcgcccacgagcgagac
ctccaacaccccccccaccgcagcggtgcctacaacccccccagcaacggccaccatagc
aacaacgagcgtccaagtcctcagcagcagcagcagcagcagcagcagcacggccggcac
gtcagcttccagcagcagcccggcagccccccccagtcgccgggcgcggccgtcctctct
cgaaccgccgagccgtcggccctcgccgctcagagccaggcgccggtccgagggccgctc
cacgtgggccagcgcgtgtgcttccctctggagagcggcgtccaggggggcgaggtgcgc
ttctgcggcccgctgcccgggcgcccctcgtcggggccgtacgtcggcgtcctgctggac
gctcccgtcggcaactgggacggcgtttacaagggcgagccgctctgccacgttccctcc
gccctctacggagtccttctgcccgtctccaaggtctccccagagacgaaaccccaccgt
cagaacccccccctccagatgaccagacccatcctgaagtcggccccgcccccggccacc
cggcccggccctttgtcgccgccggcctccgcccccaaagtggccctgatgccccccggc
aaagcggcgcctagacctcccccgccgcccaaacccgcccacaaagccccgcctctcccg
cctcccaaaccccgcagcccgacgacgacgccgccgcagcagcagctgcacgccaacggg
gcgcacggcccgccctcgccgctgaggtccccgggcggcagcgagggcgaggaggcgggg
ccgcgcggcgagctggaggtgggctcgatggtggaggtgaacgagccgccgctcttcggg
gtcatccgatgggtcggacagatcggcggcgtcccggagccggtggcgggaatagagctg
gaccaggagctctctgcgggaaccgacggcagttacctcggcgaacgccatttccgttgc
ccggccaacaaggggctgttcgtcaagctccgcaactgccgacgggactccaggtttccc
gcccccgagacgcccgtcaatcaagtggagcgatgcaactccatagccttcgccgagtgg
ggcagcgagcgggtggaggagcacacccccccggtggacgggggcgaagccgccgatctc
taccagggcagcaagaggggcatccagggtcacctgaactcctgctacctggacgccacg
ctcttcagtttgttctcctgctgcagctcagcggactttgtgttgttctggccgtctgac
tctgacgccgactcgagtcgcgcgcaggacctgctgcgctgcgagatcgtcaacccgctg
cgaaggaacggctacgtgtgtgccagcaagaccatggcgctgaggcggctgctggaggcg
ccgaacagcgacacgggcttcaccagccaggagaaagaccccgaggagttcctcaaccgg
cttttccagctcctccgagtcgagccgctcctcaagatcaggtcaatgacgcggcagcct
caggagggccacctctaccagctcttcccgcctacgctccccccctctccccgctcgcct
tccccctcctcctccacgctcggctcgcccgcccccctcccctcgcccagtcacatgagg
gtcgccagcgtccaggcgctgctggagtcctccttcctccacgccggcctcaagtttgtc
gagactccctcctgccttcttactgctcatgtctcgggatcgggaaggacttcaaaatgt
ttgacgccaatcttgccgactctcagcctggacgacaccgacctgctggacgacgctctg
aggcagtgcagcatctgtcaggccgtggccgagttcgagtgtctccagtgctacgacgac
cccgacatcactcccggtcacctcaagcagtactgccagacgtgcaacacgcaggtgcac
agtcacaggaagcgggcgtcccacgtgccggcgagcgtggccgtccccgggggtccgtgg
tccggcgggcagctgtgcgcgcgccagcggatgtcgctcttcgccgtgacgtgcatcgag
accagccactacgtgagcttcgtcaagcacgggcccgacgccgccgactggctgttcttc
gacagcatggccgaccgtgaaggtggcgagaacggattcaacatcccccgcgtgaaggcg
tgtccggaggtgggccgctacctcagcctgtcgcaggaccagctgagaagagttgacccc
gcctccttgcgtgagtcggcccggcgcctgctgtgtgactcctacatgtgtctgtaccac
agccccgagctcagcctgtacaagtga
DBGET
integrated database retrieval system
