Gasterosteus aculeatus (three-spined stickleback): 120822119
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Entry
120822119 CDS
T07457
Name
(RefSeq) protocadherin-16-like
KO
K16507
protocadherin-16/23
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gat04515
]
120822119
Cell adhesion molecules [BR:
gat04515
]
Cadherins
Cadherin related
120822119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
RET_CLD1
Cadherin_4
TMEM154
CADH_Y-type_LIR
NOMO_3rd
Motif
Other DBs
NCBI-GeneID:
120822119
NCBI-ProteinID:
XP_040037442
UniProt:
G3QBD6
LinkDB
All DBs
Position
VII:complement(23024366..23093514)
Genome browser
AA seq
3303 aa
AA seq
DB search
MPITSKGSSRRAWVSGPCVCSSPGRRRPLFYLCILLILVQSTAVLGALELQLDEEQPAGT
IVGDISAGLPPDEIGGLYFISDHESTGISNDLNIDENTGIITTARRLDREQKDHYSFIAV
TMTGVTVEVSITVNDINDHAPVFPKKKAVLKIPEHTAVGTRFSLEPATDADKNQLTTQGY
TIREGNVGQAFRLETKRAANKVLYLDLVVNGLLDREKRSLYTLVLEAFDGGSPRRMGSMT
LEVTVTDINDHAPVFNQTRYHAIISESLPQGSSILQVFATDEDEGDNGLVLYEINRRQSD
PDRSFVMDSKSGVITLNRPLDYELKRVHELVVQARDNASHPEVTNAFVTIHVRDFNDNQP
TMTIIFLTEDGSPRISEGAHPGQYVARISVTDPDYGEYANVNVSLEGGDGKFALTTKDSI
IYLIYVDQVLDREERDSYDLRVMATDSGTPPLRAESSFTIQVTDVNDNPPLFDQQAYRQT
IPEVVYPGSFVLQVTARDKDQGPNGDVRYSLLKGKNSDWFSIDKVTGIITTATALDFESE
PAPSVTVIATDSGRPPLSSTAKVDIVLQDVNDNTPVFSSNFYNASVKENTPAGTCFLEVL
ATDEDRGSFGAISFNLGSGAGSTAPTHFTIDKQTGQICTRTTLDRDEGLDTFHLTVTATD
GGGLSSVARVRVSVEDINDNRPTFYPVLYTVSLSTHSAPGTSVVKVTANDPDAGENGRVT
YRAVPAGGTGFFTLNKDTGVISLSRSLHGKANTVISMVISAEDGGGLTAPVNARVNVSVV
GGSVVSPVFDQAQYFFTVSEDVLRGTAVGAVRAATKTGVFKDIFYTISSGDPDGYFLVDS
ASGTIRTALPLDHETCSNRDLEIQARSGLPPAYGTSRVRITISDVNDNAPAFQPSSSESL
LLPEITKMGTVIYSIQATDKDSGHNGQLSFDLVSAGVAGSSGQRTFGVDRGSGEVRLIGS
LSYESVPRYDLQVVAKDGGAPQLSSTFTLVVHIQAQDAQGPNFDTLTYRVELRENSPLNT
RFLQVRALNREASGKGGSSSSSSSSSISYRLRPDGDAAGFGIMPDSGWLFVRSSLDREVK
DMYLLTVLATSGPGGTGRTGSAAVRVTVTDENDNSPRLSQERVFLAVKENLLAGTGFGRV
SATDRDTGLNARLTYRLLHTNRHFQINSQTGEISTRHALDREQQSSHQLVVVIQDGGTPP
RSATGTAHISVLDENDHAPSFTHAGPDKELLHKVMEGLPSGTVLGAVTAKDPDEGENGTI
YYSLSGSRAERFSLNSASGELRTASPLRSAERAEYAFTVTAADHGTPGLSSTCQLRIQVL
SSSRSNPKPNMLSMTLNTVEGAAPGSIIGSVRPHDEHEPNVLEGQVTYLVVGGTDRDGTF
MVDRLKGDVYLVHELDYEKGSKYSLHIEVSDFSRAFPSSHLVQLDINVQDSNDHAPQFTE
DPVTIVIPENIQPGASIFTFQAVDQDGSGPNSELHYSIEHYWPDTPDVLTLDPSSGVLTL
GQRLDRESTASLYLVVRATDQAVDPSQRRWGSVTARVFVTDVNDNAPVFSSPSAVSVMED
QPVGFVILYVMARDEDEGENGRVSYRIQAGNNAGRFSLNANTGSLSVLKALDREEQDIFN
LTIVSEDHGIPQLSTSQVLCVQVIDVNDEAPLFQRADFEAQVMENQGPGTTVMTVTATDG
DQGSNGHVTYGGVTEEGFIINPQSGVITTTKELDAELENHYTLTVYARDGGLPPNFAKAV
VRVEVKDVNDNAPIFAKPWYGLEVPENQAAVELCFLKATDPDSGPGGELEYKITAGDRDG
DFQIHASTGALSTSRALDRETGAEYTLEVVATDRGSPAFSTTVTVQVKVLDVNDNNPVFS
RSSYSVEVSEDAAEGSKVLVVSATDVDDGLNGKVLYFLSREAHGAFGVDETTGVITTSAP
LDREKWASYNFQIFAVDLSPAEPRNSSAQVTVTILDVNDNTPIFLQDPLVIEVSTKRSQR
VLATMKAEDKDFGANGSVFYRFAMPVKGFSINSLTGEIQATKPVADLTQAERTLIVEAMD
QGTPAQSAQGVVVIYVKEVEYSGIRFSRNARDVSLQENAVQGTAVAQAQAQHPDGTRNGI
SYSLFSGNRKQAFRISSSTGEIMVQSSNGLDFEDTPKLRIVVKAETVSSTSFTAINLILQ
DVNDNLPRFQLQNYVAYMRETQGYEMPIIQVMAEDVDQGQNGQLTYSIQSSGISGLFKID
PATGSITTAAIMDREIFTQTKLVVTATDRGSPRLAGSATLTVIIVDQNDNSPTIPLPQEI
RIPENMLIGTEITLVTGNDVDSSPALSYSLHLDPASLGKFGIHRYSGGVSLTAPLDFEEK
TWYTVTVRATDSQHHTEANITILVEDINDNAPAFTHDLYQVTLPEHTPPGSTVVTVTATD
RDSGENGKITYRVTSSTQEGFYVDPNNGTLFINHRAEFDPERPSVSIVIEACDAGSPSLS
SLTTVQVQISDVNDNAPVFHQSDYRATVSEDTIPGSTVLTFEAFDSDLSRENCGFDFAIA
NGNEGNAFQIESSVRFLEGRGFQTVGSLLLAEGLDFETKPLYNLTVVVSDRGVPQRSSSV
AAVITIGDVNDNPPVFSRTEYAVSLSEGAAAGTEIIRLTATDPDSTPHAEVQYTISSGDE
VNFFTMDQWTGALRLQRALDREHRSTHIVIVQATDGQGHFALAPVTVEVKDVNDNYPFFP
VEVLTVSIKENQPANSAVTVLHAIDHDTGVYGQLRYYIMERSVAGKDSFTVDQDSGEIKS
KIAFDFEKVNSFNFVAVAVDSGNHSATVTVQVFVTGEDEYDPIFTSSDFSFDVPEEAKKG
QSIGQVQASDGDEGVDGIVLYSLPTTSQYFEVNKTTGVIFLKLDGSGSSASSGSGRTKRE
ARLMTLEVRAHSPLDASRTATAQVSIDVTNTNYGLAPDVNILLISVIAVSLGLIVLLVVM
AVVVFLVKSRRRKKAQGAGNRTVATGTALQKLDDCNSGPGGEKIYHQALPGYAGDQGGAG
GGPYPRGGSLDPSHSSGRGSAEAAEDDEIRMINEYPRVASITSSMQEHISARGPDSGIQQ
DADQLSDISCEPAALEGSTWFKGKKLGGSLSGTLLSGQLPVYRDDGGGYLGAGRGLNISL
PKDYAFPEDGKPSVDGSLTAIVASDEELRGSYNWDYLLNWCPQFQPLANVFTEIARLKDE
TAQQSQNPRQPFQPKHKMDPKPRIDPPPLITSVAHPGAMSVPPKVPVLGRTFPHLASLRR
SPISHEGSISSAAMSPSFSPSLSPLAARSPAVSPFGVNQGPSASMISTREPSLDQSPDRE
MRI
NT seq
9912 nt
NT seq
+upstream
nt +downstream
nt
atgccgataacaagtaaagggtcaagccggagggcctgggtcagcggaccctgtgtgtgt
tcaagtcccggacgacgaagaccactcttttatttatgcatcctcttgattcttgtccag
tctacggccgtcctcggagcactggagctccagctggatgaggagcagcctgccgggacc
atcgtaggtgacatcagcgccgggttaccgcctgatgaaatcgggggtctttacttcatc
tcggaccacgagagcacgggcattagcaacgacctgaacatcgacgaaaacacaggcatc
attaccacggcacgccgcctggaccgtgagcaaaaggaccactatagcttcattgctgtg
acgatgacaggagtcactgttgaggtgtcgatcactgttaatgatatcaacgaccatgca
cctgtgttccccaaaaagaaagctgttcttaaaattcctgagcacaccgctgtggggaca
aggttttccctggaacccgcaacagatgcagacaagaaccagctgaccactcagggctac
acaattcgagagggcaacgtgggccaggcgttcagactcgagaccaagagagctgccaac
aaggtgctgtatctagacctggtggtcaatggccttctggacagggagaaacgctcgttg
tacacgctggtcctggaagcctttgatgggggatcacccagaaggatgggatccatgacc
ctcgaagtgactgtgacggacatcaacgatcacgctccggtcttcaatcagaccagatac
cacgctattatctctgaaagcctcccacaaggaagcagcatcctacaggtgtttgcaaca
gatgaggatgagggcgataacggtctggttctttatgaaatcaaccggcgtcagagtgac
cctgatcgctcctttgtcatggatagtaagtctggggtcatcactttgaaccggcccctg
gactatgaactgaagagggttcatgaactggtggtccaggccagggataacgccagccac
cctgaggtgaccaacgcgtttgtgaccattcatgtccgtgacttcaacgacaaccagccc
accatgaccatcatcttcctgactgaggacggctctccgagaatctccgaaggggcccat
ccgggccagtacgttgctcggatatctgtaactgacccagactatggagagtacgccaac
gtgaatgtttccctcgaggggggcgatgggaaatttgctctcacaaccaaggacagcatc
atctacctgatatatgttgaccaggtcttggaccgagaggaacgggattcttatgacctg
agggtaatggccacagactccggcacacctcccctcagagcggaatcctccttcaccatt
caggtgactgatgtcaacgacaacccccctctttttgaccagcaggcctacagacagact
attcctgaggttgtctatcccggctcctttgttctccaagttactgccagggacaaagac
cagggccccaatggggacgtgcgatatagcctcctcaagggtaaaaactctgattggttt
tctatcgacaaggtgactggtatcattaccacagcgacggcgctggatttcgaatcagag
ccagcacctagtgtgacagtaattgcaacagatagcgggcggccgccattgtcttccaca
gcaaaggtggacattgtgctgcaggatgttaacgataacacgcctgtgttctccagcaac
ttctacaatgcctccgtcaaggagaacaccccagctgggacctgcttcttagaggtgttg
gccacagatgaggatcgtggctcctttggcgctatatccttcaacctgggatctggcgct
ggaagcacagcaccaacacacttcaccatcgacaagcagactgggcagatttgcaccaga
acaactctggacagggatgaagggttggacacgtttcacttgaccgtcactgcaactgat
ggaggtggtctcagctcagtggcgcgtgtgagagtctctgtggaggacatcaatgacaac
cgacccaccttttatccagtcctctacacagtcagtctcagtacccatagtgccccggga
acctccgttgtcaaggtaacagcgaatgaccctgatgccggggaaaacggcagggtgacc
taccgcgcagtgcctgcgggaggaactggtttcttcactctcaacaaggacacgggcgtg
atttctctctcgcgctcgctccacggcaaagccaacacggtgatctctatggtcatatca
gcagaggacggcggtggtctgacggcgccggtcaatgccagggtaaacgtgagtgtggtg
ggaggctcagttgtgtctcccgtgtttgaccaggcccagtatttcttcaccgtgtcggag
gacgttctcagggggacagcggtgggagcggtccgagctgctaccaagacaggcgttttt
aaggatatattttacaccatttcctccggagaccccgatggttacttcctggtggacagt
gcttccggaaccattcgcactgcccttcctcttgaccacgaaacctgctctaatcgcgac
ctggagatccaggcgcgctccggacttcctccagcgtacggaaccagccgggtacgaata
accatttcagacgtgaatgacaacgccccggccttccagccctcgtcgtcagagtcactg
cttttacctgagatcaccaaaatggggaccgttatctacagcattcaggccaccgacaag
gactctggtcataacggccagctcagcttcgacctggtttctgccggagtcgccggcagc
agcggccagaggaccttcggcgtcgaccgcggcagcggggaggtacgtttgatcgggagt
ctttcttacgaaagtgttcctcgctacgacctgcaggtggtcgccaaggatggcggtgcg
cctcagctcagctccactttcaccctcgtcgtccacatccaagcccaagatgcacaaggc
cccaacttcgacaccctgacctaccgcgtggagctacgagaaaacagccctctcaacaca
cgtttcctccaagttcgagccctcaacagggaggcttctgggaagggagggagctcgtcc
tcctcttcttcatcctctatttcctaccggcttaggcctgacggcgacgccgccggtttt
ggcatcatgccggacagtgggtggctgtttgttcgtagctctctggaccgagaggtcaaa
gacatgtacctgctgaccgtcctggcaacttcaggcccaggagggacggggagaaccggc
agtgccgcggtcagggtgacggtaactgatgagaacgacaattccccgagactgagccag
gagagggtgttcctggctgtcaaggagaatctgctggcagggaccggctttggaagggtg
tctgcgacggacagagacacaggactaaatgctcgactcacctacaggctgctgcacacc
aacaggcactttcagatcaactcgcaaacaggggagattagcacccgccacgctttggac
agagagcagcagtccagccaccagcttgtcgtggtcatacaggacgggggtacgcctcct
cgcagcgccaccggcaccgctcatatcagcgtgctggacgaaaacgaccacgcgcccagc
tttactcatgccgggccggacaaggagctgctacacaaggtgatggaggggctcccatcc
gggactgttttaggggcagtcactgctaaagaccccgatgagggagagaacgggaccata
tactactcattatcaggctccagagcagagcgtttctcccttaactcggccagcggggag
ctccgaaccgcttctcctctgagatcagccgagcgcgccgagtatgccttcaccgtaacc
gctgctgaccacgggacacccggcctcagctccacgtgccagttgcggatacaggtcctc
agctcctctcggtccaaccccaagcccaacatgctctccatgaccctgaacacagtcgaa
ggagctgctccgggctccatcatcggctcggtccgtccacatgacgagcatgaacctaat
gtgttggaaggccaggtgacctacctggttgtcggggggacagaccgggacgggactttc
atggtggaccgcttgaagggcgacgtgtacctggtgcatgagctggactacgagaagggc
tcaaagtacagcctgcacatcgaggtgtctgacttctcccgggcgtttcctagcagccac
ctggtgcagctggatatcaacgtgcaggacagcaatgaccatgctccgcagttcacagaa
gaccccgttaccatcgtgatcccagagaacatacagccaggggcttctatatttactttc
caagctgtggatcaggatggcagtggacccaacagtgagctgcactactccatcgagcac
tactggcccgacacgccagacgtcctgaccctcgacccctccagcggagtgctgaccctt
gggcagaggctggatcgtgagtcaacggcttccctctacctggtggtgcgggccacagac
caagcagtggatccgtcccagaggcgctggggctcagtcaccgcccgggtgttcgtgacg
gacgtcaacgacaacgctccggtcttcagctctccttctgcagtcagcgttatggaggat
cagccagtaggatttgtgattttgtatgtgatggctcgagatgaagacgaaggggaaaat
ggcagagtgtcgtacaggatccaggcgggcaacaacgctggtcgcttcagtcttaacgcc
aacactggttctctctctgtccttaaagcacttgaccgggaagaacaggacatcttcaat
ctgaccatcgtgtcagaggatcatgggattcctcagctttccacttctcaggtgttgtgt
gtccaggtcatagatgtgaacgatgaagctccgttgttccagcgagcagactttgaagct
caggtgatggaaaaccaaggacctggaacaactgtcatgacagttaccgccactgacggg
gatcaaggttctaatggccacgtgacatatggaggtgtgacagaggaaggcttcataatc
aaccctcagtcaggagtcatcaccaccacaaaggaactggatgcagagcttgagaatcac
tacactctcactgtgtatgcaagggatggagggctgcctcctaactttgccaaggctgta
gtgcgtgtggaggtgaaggatgtgaacgacaatgctcccatctttgctaaaccgtggtac
ggactggaggtgccggagaaccaggccgctgtggaactttgctttctcaaggccacagac
cctgactctggtcctggtggagagctggagtacaagatcactgctggggaccgtgatgga
gatttccaaatccacgccagcacaggagcactgtccacgtcacgcgccctagacagggag
acgggagctgaatatacattggaggtcgtggccacggaccgaggcagccctgctttcagc
accaccgtcactgtgcaagtcaaagtgctggatgtcaatgacaacaaccccgtcttcagc
agaagcagttactctgtggaagtgtcagaggatgccgcagaagggtccaaagttttggtg
gtgtcagccacggacgttgatgacggactgaatgggaaggttctgtactttctgagccga
gaggcgcacggagcgttcggtgtggatgagaccactggcgttatcaccacatcagcacct
ctggaccgggaaaaatgggcgtcatacaacttccagatttttgctgttgacctttcacct
gctgaaccccgcaactcctccgctcaggtgacggtcaccatcctagacgtcaacgacaac
actcccatcttcctccaggacccgctcgtcatcgaagtctccactaagcgctcccagcgg
gttttagccaccatgaaggccgaagataaagactttggagccaacggttctgttttttac
cgtttcgccatgccagtaaagggattcagcatcaactccctgactggtgagatccaagcc
accaagccagtggcggatctgacccaggctgagaggaccctgatagtggaggccatggac
cagggtactccagcccagtcggcccagggggtggtggtgatttacgtgaaggaggtggag
tacagcggtattcgcttctctaggaatgccagagacgtcagcctacaggagaatgccgta
caaggcacggctgtggctcaggctcaggctcaacacccggatggcacacgtaatggtatc
agctacagcctattcagtggcaatagaaagcaggccttccgcatcagctcctcaacaggg
gaaatcatggtgcagagctccaacggtttggactttgaagacaccccaaaactccgcata
gttgtgaaggctgaaacagtgtcctccacatctttcacggcaatcaacttgatcctgcag
gatgtcaacgacaatcttccccgctttcagctgcagaactatgtggcctacatgagggaa
acacagggctatgagatgccaataatacaggtgatggctgaggatgtcgatcagggccaa
aatggtcagttgacttactccatccagtcatcaggcataagcggcctgtttaagatagac
ccggcgacaggaagcatcaccacagcagccatcatggaccgtgagatctttacccagacc
aagcttgtagttacagccactgatagaggaagtccacggctggctggttcggccacattg
acggtgataattgtcgaccagaacgacaacagtccgaccattcccctgcctcaggaaatc
cgcatcccagagaatatgttgattggcaccgagatcactcttgtgacgggtaacgatgtt
gactccagtccggccctctcctactccctgcaccttgacccagcatccttaggcaagttt
gggatccaccgctacagcggaggcgtatcactcactgcccctctggactttgaggagaag
acgtggtacaccgtgactgtcagagccacagacagccagcatcacaccgaggctaacatt
acaatactggtggaagatattaatgacaatgcacctgcattcacccatgatctctatcag
gtaactctgcctgagcacacaccaccaggaagcacagttgtcacggtaacagcaactgac
agggattctggggagaacggaaagatcacctacagagtgacctcatcaacccaagagggt
ttctacgttgaccccaacaacggaaccctgttcatcaatcacagagccgagtttgaccct
gaacgtccctcagtcagtattgttattgaagcgtgtgatgcagggtcgccttcgctctcc
tccctcaccaccgtccaagtccaaatctctgacgtcaatgacaatgctcctgtgtttcat
caatcagattacagggctacagtttctgaagataccatcccagggtcaacagttctgact
ttcgaggcctttgacagcgacctctcgcgggaaaactgtggcttcgacttcgccattgcc
aatggaaatgagggaaatgcgttccagattgaaagcagcgtgcggttcttggagggacga
ggctttcagacagttgggagtctgcttttggccgagggacttgacttcgaaaccaagccc
ctttacaacctcactgtggtggtgtcggaccgcggtgtgccccagaggagctctagtgtc
gcagcagtaatcaccattggggatgtgaatgataaccctccggtgttcagcagaacagaa
tatgccgtgtcgctgagcgagggagctgccgccgggactgagatcatacggctgactgcg
acagacccagactcaactccccatgctgaggtccaatacacaatcagctctggtgatgag
gtgaacttttttaccatggaccagtggactggtgccttacggcttcagcgagccctcgac
cgtgagcaccggtccacacatattgtcatcgtccaggccacagatggacagggtcacttt
gcactagctccagtcactgttgaggtcaaagacgtaaatgacaattatccgttctttcct
gtggaagtcctgacagtcagtataaaagaaaaccaaccagcgaactcagctgtgacagtt
ctacatgccatagatcatgacacgggagtttatggccagctgaggtactacattatggag
cggtcagtggcgggaaaagacagcttcactgtagaccaggactctggagaaatcaaaagc
aaaattgcatttgactttgagaaggtcaactcctttaactttgtagcagtggcagtagat
tcaggaaaccactcagccactgtaaccgtacaggtgtttgtcacgggggaggatgagtat
gacccaatcttcacatcctctgatttctcctttgatgtcccagaggaagctaagaaaggc
cagagcattggccaggtccaggcaagtgacggagatgaaggagtggatggcattgttctc
tattctcttcccaccacctcccagtactttgaagtaaacaaaaccactggcgtcattttc
ctcaagttggacggctcaggaagcagtgctagcagtggctctggccggaccaaacgggaa
gccaggctgatgaccctagaagtgagagctcacagtcctttagatgcatctcgcaccgct
acagcccaggtctccatcgatgtcacaaacaccaactacggccttgcccccgatgtcaac
atcctactgataagcgtcatcgctgtgtctcttggtcttatcgtgttgcttgtggtcatg
gctgtggtagtgttccttgtcaagtcacgcaggaggaagaaagcccagggtgcaggaaat
agaactgttgccacgggaactgctctgcagaaattggatgattgcaactcaggaccagga
ggggagaagatctaccaccaggctttgccaggctatgctggagatcagggtggggccggt
ggtggaccctaccctagaggaggctctctggatccctctcactccagtggaagaggatct
gccgaggcagcagaagatgatgagatcaggatgataaacgagtatccccgtgttgcctcc
atcacctcgtccatgcaggagcacatctctgccaggggaccggactctggaattcagcag
gatgctgaccagctctctgatatctcctgtgagccggctgctttggaaggcagcacctgg
ttcaaaggaaagaaactgggaggcagtctcagtgggacattgctatctggccagctccca
gtctatagggacgatggaggagggtacctaggggcaggccgtggcctcaacatttccctt
cccaaggattacgccttcccagaggatggcaagccttcagtggatggttctctgacagct
atcgttgccagtgacgaggagctccgcggaagttataactgggattacttactcaactgg
tgccctcagttccagcccctagctaatgtcttcacagaaattgccaggctgaaagatgaa
actgcccagcagagccaaaatcctcgccaacctttccagcccaagcacaaaatggatcca
aaacctaggattgatcctccaccactcatcacatcagttgctcatccaggggccatgtca
gtcccccccaaggtccctgtcctcggacggacattcccccacctggcctcactccgcagg
tcccctatcagtcacgagggatccatttcgtcagcagcaatgtcccccagcttctcccct
tcgctgtctcctttggcagctcgatctccagctgtttctccctttggtgtcaatcagggt
ccctcagcatccatgatcagcaccagggagccctcactggaccagagtcccgatcgcgag
atgagaatatga
DBGET
integrated database retrieval system
