Gasterosteus aculeatus (three-spined stickleback): 120822120
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Entry
120822120 CDS
T07457
Symbol
gigyf1a
Name
(RefSeq) GRB10-interacting GYF protein 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120822120 (gigyf1a)
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
120822120 (gigyf1a)
Surveillance factors
Other surveillance factors
120822120 (gigyf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
120822120
NCBI-ProteinID:
XP_040037443
UniProt:
A0AAQ4QP60
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All DBs
Position
VII:complement(9066607..9081259)
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AA seq
1119 aa
AA seq
DB search
MTAETLNFGPEWLRALSSGGSVTSPPPSPAMPKYKLAEYRYGREEMLALYIKDNKVPEDM
QDKEFAAILQDEPMQPLALVALTEEEQRNFSMSVNSVAVLRLMGKGVGAPAPAGVARGRG
APRGGRGRGRGESGFYQRSIEEPEVGFGRSVREIHRSQSWDDRGERRFEKPLRREVGRPG
FEEPVAPVVPGRKEYTRADSDNWRILREEQEEEEGGGGSGGVAGGVVSSGEPGTNWRLTG
IRRDVQFDTDGGACLLSDGGPRSAGWRDHTGPGESRRRKFDFDFRDSDGHGGSGGRRRAG
SEGLEDDRDGLPEWCTDEEDGEMGTFDSSGAFMTMKKGGKDSILEEEFEFKGIEEDEEEE
CYADMDMKSAEGDKDKESKEAGSAGGEGETQQTSPSSSPPALIHCSPPALEPRPSNAGPV
VENPPLNNSHPVKASSTSNEDMATFGFSKVHMNLDAPASSSLPPPPPSSAAPLHPPPGGD
TEDDEGMKHLQQEAEKMVASLQDTSLEEECFTQTLQQQESRNTAAALPLSHEAAMKWFYK
DPQGEIQGPFTTVEMCEWFQAGYFTMTLLVKRGCDEGFQPLGDVIKMWGRVPFAPGPSPP
PLLVRQPPPTQRPQSSRGSAGTVSQSSANAEDGEGRMQRRGKLDRQVTGNLDQDRLKKEL
AAAALYQQLQQQQIFQLINRCSEQGMMPSMNRSMSVPDTGSMWDMHTSASQPSGGEASLW
DITMNPSTQGPTLEQLQKLQQERREAELRAKREEEEQRKRREEKRRQQEDQKRREEEDLF
RRKQCRQQQELIMKLLQQTPQQQGPGASGSGWSGSPSSGLSKSGKPPALALLEMQQEAER
LLKQQQQQRAQQRERHSGLSMGSSSIGGQWADGVGMWGGGMEGKSSSGSSSGSMGMWDEA
VKNQSGLRGNSNNNMGLKNSRSSPSLSEQYMMRRKRTEEEEKLLKLLQGMKPQDGFTTWC
EQMLHALNTSANNSSSSLDVATIVAYLKEVESPYAVLDFIRSYLGDTVEAKEFAKQFLER
RAKQKANQQRQQQQLSKEVAGLNMNFPLQDSMRGMNPSTLQSMFQANHMGKSGLYDIQGG
KMKKKQPMMLHSDPSILGYSFHNTGECLSLNEMEMVEDY
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgagactcttaacttcggcccagaatggctccgtgcactgtccagtgggggg
agtgtgacttcccctcctccttcccccgccatgccaaagtacaagctggccgagtaccgc
tacggccgagaggagatgttagcactttatatcaaagacaacaaggtcccagaggacatg
caggataaggagtttgctgctattctgcaagatgagcccatgcagccactggcactggtg
gcactcactgaggaggagcagaggaacttctccatgtctgtgaacagcgtggctgtgctg
aggctcatgggaaaaggggtcggcgcgcccgccccagctggagtggcgcgaggacgaggt
gccccgagaggcggtcgaggacgaggccgtggagaaagtggattctaccaaagaagtatt
gaagaacccgaggtgggtttcggacgcagcgtccgagagatccaccgtagccagagctgg
gatgaccggggcgaacggcggttcgagaagccgctgcggcgggaggtggggcgtcctggc
ttcgaagagcccgtcgctcccgtggttccggggaggaaggagtacacgcgggcggacagc
gacaactggcgcatcctccgggaggagcaggaggaggaggaaggcgggggtggcagcggg
ggggtcgctgggggtgtggtcagcagcggagagccgggcacaaactggagacttactgga
atccgcagggatgtccagtttgacactgatggcggcgcatgtcttttgtcagatggcggt
cctcgctcagcaggctggcgggaccacaccggtccgggggagagtcgtcgtcggaagttt
gattttgatttccgggactccgatggccacggcggcagcggcggccggcggcgcgcgggc
agcgagggactagaggacgacagggacggcctgcccgagtggtgcacagacgaggaggat
ggagagatgggcacgtttgactcctctggagcgttcatgactatgaagaagggtgggaag
gattcaatcctggaggaggagtttgagttcaagggcatcgaggaggacgaagaggaggag
tgctatgctgacatggacatgaagagtgctgaaggagacaaagacaaggagagtaaagaa
gctggctctgctggtggggaaggggagacacagcagacgtctccctcgtcgtctcccccc
gctctcatacactgttcccctcccgccctggagcctcggcccagcaacgccggccctgtg
gtggaaaaccctccgctgaacaacagccaccccgtcaaggccagcagcacgtccaatgaa
gacatggctactttcggcttctccaaggtccacatgaacctcgacgcccccgcctcctcc
agccttcctcccccacccccttcctctgctgctcctctccaccctccacccggaggagac
acggaggacgatgagggcatgaagcacctgcagcaggaggcggaaaagatggtggcgtcg
ctgcaggacacttctctggaggaagagtgtttcacccagactctgcagcagcaggagagc
aggaacaccgcagccgctctgccgctgtcgcacgaggccgccatgaagtggttctacaag
gacccgcagggagagatccagggtccgttcaccaccgtggagatgtgcgagtggttccag
gccggctacttcaccatgaccctgctggtgaagcggggctgcgacgagggcttccagccc
ctgggcgacgtcatcaagatgtggggccgcgtgcccttcgccccgggaccctccccgccg
cccctgctagtgagacagcccccaccgacgcagcgcccgcagtccagccgggggtccgcc
gggactgtgagtcagagctcagccaacgctgaggatggggaggggaggatgcagaggaga
gggaagcttgatagacaggttacgggaaacctggaccaggaccgcctgaagaaggagctg
gcagcagcagctctttatcagcagctccagcagcagcagatattccagctcattaacagg
tgcagtgagcagggtatgatgccttcgatgaacaggtcgatgtcagtgccagatacaggg
tccatgtgggacatgcatacctcagcttctcagccgtcaggcggtgaagccagtctttgg
gacataacaatgaatccttctactcagggtccaactctggaacagcttcaaaagctccag
caggagaggcgagaggctgaactcagggcaaagcgtgaagaggaggagcagcgcaagagg
agggaggagaagaggaggcagcaggaggaccagaaaaggagggaggaggaggatctcttc
cgacgcaagcagtgtcgtcagcagcaggaactgatcatgaagctgctccagcagaccccc
cagcagcaaggtcctggggcaagtggatcaggctggagcgggtctccctcctctgggcta
tccaagtccgggaagcccccggctctggctctgctggagatgcagcaggaggccgagagg
cttctgaagcagcagcagcaacagagagcgcagcagagagagcgccactctggcctgtcc
atggggagctcctccatcggagggcagtgggcggacggagtcggcatgtggggcggaggc
atggagggtaagagcagcagcgggagctcttcgggcagcatgggcatgtgggacgaggct
gtgaagaaccagtccggcctccgtggcaacagcaacaacaacatgggcctgaagaacagc
cgcagtagcccgtcactcagtgagcagtacatgatgcgccgtaagcggacggaggaggag
gagaagctgctgaagctgctgcagggcatgaagcctcaggacggcttcacgacctggtgt
gaacagatgctgcacgctctcaacacctctgccaacaactcgtcctcctctctggatgtt
gccactatcgtggcctacctgaaggaggtggagtctccctatgcagtactggacttcatc
cggtcctacctaggggacacagtggaagccaaagagttcgccaaacagtttctggagcga
cgtgccaaacagaaagccaaccaacagagacagcaacagcagttatcaaaggaagtggct
ggattgaacatgaacttccctctgcaggactcaatgcgaggtatgaatccaagcaccctg
cagtccatgtttcaagccaaccacatgggcaaatctggtctctatgacatccaaggggga
aagatgaagaagaaacagcccatgatgctgcactctgaccccagcatcttaggctactca
ttccacaacacgggcgagtgtctgagcctgaatgagatggagatggtggaggattactga
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integrated database retrieval system
