Gasterosteus aculeatus (three-spined stickleback): 120822126
Help
Entry
120822126 CDS
T07457
Symbol
dhx15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120822126 (dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gat03041
]
120822126 (dhx15)
03009 Ribosome biogenesis [BR:
gat03009
]
120822126 (dhx15)
Enzymes [BR:
gat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
120822126 (dhx15)
Spliceosome [BR:
gat03041
]
Complex A
U2 snRNP components
U2 related factors
120822126 (dhx15)
Complex B
120822126 (dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
120822126 (dhx15)
Ribosome biogenesis [BR:
gat03009
]
Eukaryotic type
90S particles
Helicases
120822126 (dhx15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
Flavi_DEAD
AAA_29
nSTAND3
Motif
Other DBs
NCBI-GeneID:
120822126
NCBI-ProteinID:
XP_040037461
LinkDB
All DBs
Position
VII:complement(7038950..7060524)
Genome browser
AA seq
759 aa
AA seq
DB search
MFKRHRLDLGDDNSTGKKRATEGRDRDRDCDERSRDRDRDRARDRDWDRDRDAKSAGVPT
NPAAGSGVFVKPTPFQQKINPFTNLPHTPRYYEILKKRLQLPVWEYRERFTEILMRNQSF
VLVGETGSGKTTQIPQWCGDMVRSMPGTKRAVACTQPRRVAAMSVAQRVADEMDVMLGQE
VGYSIRFEDCSSAKTVLKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVL
KEVVRQRADLKVIVMSATLDAGKFQVYFDSCPLLTIPGRTHPVEIFYTPEPERDYLEAAI
RTVIQIHMCEVDEGDVLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQ
QQRIFEPPPPNKPSGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESL
LVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKK
LGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVI
ASCEFNCSNEILSITAMLSVPQCFVRPTEAKKVADESKMRFAHIDGDHMTLLNVYHAFKQ
NHDSTQWCYENFVNYRSLMSADNVRQQLSRIMDRFSLPRRSTEFNSRDYYTNIRRALVTG
FFMQIAHLERTGHYLTAKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPE
WLVKVAPQYYEMGNFPQCEAKRQLERIIAKLSSKEFTQY
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagagacaccgtttagatttgggtgacgataattcgaccggcaaaaagagagct
accgaggggcgcgacagggacagagactgcgatgaacggtcgagggacagggaccgcgac
cgagctcgggaccgggactgggacagggacagagatgcgaagtcggccggggttcccacc
aacccggctgcaggcagcggagtcttcgtgaaaccaaccccctttcagcagaagatcaac
cccttcaccaacctgccccacacgccgcgctactatgaaatcctgaagaagcgtctgcag
ctgcctgtctgggagtacagggagcgcttcacagaaatcctgatgcgtaaccagtccttt
gtgctggtgggggagacgggctctggaaaaaccacacagatccctcagtggtgcggcgac
atggtgcggtcgatgccgggaacaaaaagagcggtggcctgcacccagcccaggagggtg
gcggccatgagcgtcgcccagagggtcgctgatgagatggatgtcatgctgggccaagag
gtgggctactccatcaggtttgaggactgcagctcggcaaagaccgtactcaagtacatg
acggatggaatgttgctgcgggaggccatgaatgatcctctgctggagcgctacggtgtc
atcatcctggacgaggctcatgaacgcacgttagccacagatatcctcatgggagtcctc
aaggaggtggtccgccagagggctgatctcaaggtgattgtgatgagtgccacgctcgac
gccggcaagttccaggtgtactttgacagctgcccactgctgaccatccccggacgcacg
catcccgtcgagatcttctacacgcccgagcccgagcgggactacctggaggcagccatc
cgcacggtgatccagatccacatgtgtgaggtggatgaaggggatgttctcctcttcctc
accggacaagaggaaattgatgaagcctgcaagcggatcaagagggaggtcgacgatctg
ggccctgaagtcggcgatataaagatcatcccgctgtactccacgctgccgccgcagcag
cagcagaggatcttcgagccgcccccacccaacaaaccaagtggggccatcggaaggaag
gttgtcgtgtcaaccaacatcgcggagacgtcgctgaccattgacggcgtggtgtttgta
attgatcctggatttgccaagcaaaaggtgtataatcctcgtatccgagtggaatccctt
ttggtgacggccatcagcaaggcctcggcccagcagcgggccggccgcgccggacgcaca
cgcccgggaaagtgtttccgcctttacaccgagaaagcttacaagacagaaatgcaggac
aacacatatccagagattctgaggtccaatctgggctctgtggtgctgcagctgaagaaa
ctgggtatcgacgacctggtgcactttgacttcatggacccaccagccccagagaccctg
atgagagccctggagctgctgaactacctggcggcgctcaacgacgacggcgacctgacg
gagctgggctccatgatggcggagttccctctggacccccagctggccaagatggtcatc
gccagctgtgaattcaactgttcaaacgagatcctctcaatcactgccatgttgtcagtc
ccacagtgcttcgtccgacccacggaggctaagaaggtggccgacgagtccaagatgcgc
ttcgcccacatcgacggggaccacatgacgctgctcaacgtctaccacgccttcaagcaa
aaccacgactccactcagtggtgctacgagaactttgtcaactaccgctcgctgatgtct
gcagacaacgttcggcagcagctgtccaggatcatggaccgcttcagcctgccgcggcgc
agcaccgagttcaacagcagagactactacaccaacatccggcgggcgctggtcacgggc
ttcttcatgcagatcgctcacctggaacgcaccggccattacctgaccgccaaagacaac
caggtggttcagctgcacccctccaccgtgctggaccacaagcccgagtgggtcctctac
aacgagtttgtgctcacaaccaagaattacatccgcacgtgcaccgacatcaaaccagag
tggctggtgaaagtggccccgcagtactacgagatgggcaacttcccccagtgcgaagca
aagagacagttggagcgcatcatcgcaaaactctcatcgaaggaattcactcagtactaa
DBGET
integrated database retrieval system
