Gasterosteus aculeatus (three-spined stickleback): 120822266
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Entry
120822266 CDS
T07457
Symbol
sptbn4a
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04517
IgSF CAM signaling
gat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120822266 (sptbn4a)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120822266 (sptbn4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gat04812
]
120822266 (sptbn4a)
Cytoskeleton proteins [BR:
gat04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
120822266 (sptbn4a)
Intermediate filaments
Intermediate filament-binding proteins
120822266 (sptbn4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
PH
PH_9
Motif
Other DBs
NCBI-GeneID:
120822266
NCBI-ProteinID:
XP_040037736
UniProt:
G3Q9S0
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All DBs
Position
VII:15157121..15183880
Genome browser
AA seq
1562 aa
AA seq
DB search
MLMARDTARDEAQKLHRKWLKHQAFMAELARNKEWLAKIEQEGQELIQEKPELRPVVQQK
LEEIRECWSDLESTTKAKARQLFENNKPEPAVKSYSDLDNQLSHLEQEPPQLEQAHHLPT
FNEQLQKFQAMESQIGDFYKDVGELGSLQGVCLPQRGLMAGDRESGEQSPVVETRIVRLI
EPLKERRRILLASKEMHQVAQDLEDEILWIQERLPLASCKDYGTNLQSVQQHVKKNQTLQ
RELTGRRARVEEVLDRAAIIASLRTPEVEFVREGAGHVRQLWEVLQLETERRCVMLDATL
QAQQYYSEAAKVESWLSGQKLHLVNEERGTDEPSTLLLLKAHLALEQTVETYAETVGMLS
QQCQRLMELGHPESEQLTKQQTHIDRLYVSLKDMVEHRKTKLEQQYWLYQLNKDVEELEK
WITERETVASSTELGHDLEDVTVLQERFTKFASETNNVGQRSMEQVNKMVNEMIDCGHSD
AATIAEWKDGLNESWADLLELMETRRQMLAASHQLHKFFTDCKEVLAQISGKMKQLPEVR
ACQANITNPATLQRLMHSFEHALQLLVAQVRQLQENAAQLRTIYAGEKAEAIMLKEMQVM
EAWKELLGSCEASRVQVTSVTDKVQFFSVVRENLMWMEGIMGQIGWDEPRDLAALEVMIK
QHQEMKAKVDGRSKTIQQCADLGKILIAAGNPASEEIQEKLDSLLAKQRDLVEKWDKHQD
KLKRKQEKFQFAQETVRAEAWLKAKEPLITSREPEGGGAQAQTDEVEQLILRHEAFRKAA
VTWKERFSSLRQLSADEKKKEEEKKTTPLSSRRMFPLSCLTPNVPSTSATSSFLRQTVQA
HIEHKPIQTSLDLGATPASKRLSSTLGSYKPVINGSGYHGLEQQSSGKFVSPSYLGMNHQ
PVGPGSDSGFSALTSHSGGGDSTTYLGINNQTAGSAESSGYFGLTTGSVGSMHNHQASGR
LGSSGNLAQQPSSGGMGSPGLLPQQNMGSSGYLGHQPNLGSTGYLAQQPNLGSSGYLVQQ
PNTGSSGYLAQQPNTGSSGYLAQQPNTGSPGYLGQQPNMGSSGYLAQQPNMGSSGYLAQQ
SNIVSSGYLAQNYQSSGGLGSSGFLAQNHYSSGSLGSSGYLAQSGGIMDPKMAYAWQHLK
ADFMQPRINHIHKAVNPLLEASRVQREQFGDIPMADMVGPESGLELLHGRLQRDPRGSRS
DPQMDHLRREREYKLGRQTSSEQEIQARLNELPLIVRQERYRRRLERQSSSEQEGSNKQR
LQRQDSSDLEGSVKEGSDKRSGEKRSTMAEIVEQAQEREAAQTRGEPYRPTSSLSAPVTR
FDGRPRARDRPKPRRRPRPKEPEETRRSRSAPATGAPTTPQPPSHTAQNEGFLYRKKVTT
SDLEAQQRSPNSKSWTNVYCVLKEGQLIFYKDARHQTTPYNDEPPVDLSNCSFDPSMGYK
KKKNVFILQMNDGNNLAFHAKDEEDLKAWTSNITNCIAEHESMGKWDKPGTSSMDPDNSE
RKEKSEGDADARSERSELAEGEERSEKERSEKGDGSEKLDTSEIADKMEGGAGGSSTSGK
SK
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atgcttatggcccgagacacggcgcgggacgaggctcaaaagctacacaggaagtggctg
aagcaccaggcctttatggcggagctggcccgcaataaagaatggcttgccaagatcgag
caggagggtcaggagctgatccaggagaagccagagctgcgtccagtggttcagcagaag
ctggaggagatcagagagtgctggtccgacctggagagcaccacaaaggccaaggcccgt
caactctttgaaaacaacaagcccgagccggcggtgaagagctactcagacctggacaac
cagctctcccacctggaacaggagcccccccagttggagcaggcccaccatctgcccaca
ttcaacgagcagctccagaaattccaggctatggagtctcagattggggacttctacaag
gatgtgggagagctgggtagcttgcaaggggtctgcctaccccagcgagggctgatggcg
ggcgacagggaaagcggggagcagtcgcccgtggtggagacacgcattgttcgtctcatt
gagccgctgaaggagagacgccgcatcctgctggcttccaaagagatgcaccaggtcgcc
caggacctggaggacgagatactgtggattcaggagaggcttcccttggcctcctgtaaa
gattatgggactaacctccagagtgtacagcagcacgtaaaaaagaaccagacactccaa
agggagctgacggggcggcgggctcgtgttgaggaggttctggaccgtgcggcgatcatc
gcttcgctaaggactcccgaggtggagtttgtgcgcgaaggggccggacatgtgcgccag
ctgtgggaggttttgcagctggagacggagcggcggtgcgtgatgctagatgccacgctg
caggctcagcagtactacagcgaggcggccaaagttgagtcctggctgtcgggtcagaag
ctccatctggtcaatgaggagagaggcacggacgagccgagcaccctgctgctgctgaag
gcccacctggccctggagcaaacagtggaaacgtacgcagagaccgtaggcatgctatcc
cagcagtgccagcgtcttatggaacttggacacccagaaagcgagcagctcaccaagcag
cagacgcacatagaccggctatatgtgtctctgaaggacatggtggagcacaggaagacc
aagctggagcagcagtactggctttatcagctcaacaaggacgtggaggagttagagaag
tggatcaccgagcgggagacagtggctagctccaccgaactgggccacgacctggaggac
gtcacggtgctccaggagagattcaccaagtttgcctcagaaaccaacaatgtcggccag
cggagcatggagcaggtgaacaaaatggtgaacgagatgatcgactgtggtcactcagac
gcggccaccattgccgagtggaaggacgggctgaacgagtcgtgggccgatctcctggag
ctgatggagacccgcaggcagatgctggcggcgtcgcaccagctgcacaagttctttacc
gactgcaaagaggtcttggctcagatctcggggaagatgaagcagctgccagaggtgagg
gcgtgccaagccaacatcaccaatccggccaccctgcagagactcatgcactcatttgaa
catgcccttcaactgctcgtcgcacaggtgaggcagctgcaagagaacgcagcccagttg
aggaccatctatgctggggagaaggccgaggccataatgctcaaagagatgcaggtgatg
gaggcctggaaggagctgctgggctcttgcgaggccagtcgcgtccaggtcacctcagtt
acagacaaggtgcagttcttctcagtggtgcgtgaaaacctgatgtggatggaaggcatc
atgggccagatcggatgggatgagcccagggatttggctgctctagaggtgatgataaaa
caacatcaggaaatgaaagccaaagtagacggccgcagcaagaccatacagcagtgtgca
gatctgggaaagatcttaatagctgccgggaaccctgcatcagaggagatacaagagaag
ctggacagtcttctggctaagcagagggatcttgtggaaaaatgggacaaacaccaggat
aagttgaagcgcaagcaggaaaagttccagtttgcccaggagacggtaagggcggaagcc
tggcttaaggccaaggagccattgatcacctccagagagccagagggaggaggggcccag
gctcaaacagacgaggttgagcaactcatccttcgccacgaggccttccgcaaggctgct
gtaacctggaaagaacgcttcagctctctccgccagctttccgcagatgagaagaaaaaa
gaggaggagaaaaagacaaccccactctccagccgaaggatgttcccactatcatgtctg
acacccaacgttccctcaaccagtgctacctcatctttcttgaggcagaccgtacaggcc
catattgaacacaaacccatacaaaccagtctggatcttggtgccacccctgcaagcaaa
agattgtcttcaaccctaggaagctacaagccagttataaatggatcaggctatcatgga
ttggaacagcagagcagtgggaaatttgtgagcccctcgtaccttggaatgaaccaccag
ccagttggaccgggaagtgactccggtttctcggcgctgacctcccatagcggtggagga
gattctactacttaccttggtataaacaatcaaactgctggcagtgcagagagctctggg
tactttggactgaccaccggtagtgtaggtagtatgcataaccatcaagccagtggtagg
ttaggaagttcaggtaacctagcccagcagccaagcagtggaggtatgggaagccctggc
cttttacctcaacagaacatgggaagctctggatacttaggacatcagcctaatttaggg
agtacaggatatttggcacaacagcctaatctggggagttccgggtatctggtacagcag
cctaatactgggagttctgggtatttggcacaacagcctaatacgggcagttctgggtat
ttggcacaacagcctaatacgggaagtcctgggtatttggggcaacagcctaatatgggg
agctctgggtatttagcacaacagcctaatatggggagctctgggtatttagcacaacag
tcaaatattgtgagttctggatacctagcacagaattatcagagcagtgggggattgggt
agttcaggttttctggcacaaaatcattacagcagtggaagtctgggcagttctggttac
ctggcgcagagtggtggcatcatggaccctaaaatggcatatgcatggcagcacctcaaa
gctgacttcatgcagcccagaatcaaccacatccacaaggctgtaaaccccctactagaa
gccagcagagtgcagcgggaacagtttggggacatcccaatggcagacatggtggggcca
gaatcaggtctggagctccttcacggccgtctacagagggatccccgtggcagccgctct
gatccccagatggaccatctgaggcgagagagggagtacaagctgggtaggcagacctct
agcgaacaggagatccaagccaggctgaacgagttgccactgattgtgcgtcaagagcgt
taccggaggcgcctagagaggcagtcgtccagtgaacaggaggggagcaacaagcagaga
ctacaaagacaggactcgagtgacctggagggctcagttaaggagggctctgacaaacgc
tcaggggaaaagaggtctaccatggcagagattgtagaacaggcccaggagagagaggca
gcacagacacgaggagagccttatcggccaacaagcagcctctcagcacccgtgactcgc
tttgacggacgccctcgtgccagagaccgccccaaaccgaggaggaggccccgtccgaaa
gaacccgaggaaacacgacgttctcgctcggctccagctactggtgccccaacaacacca
caaccgccttcacacactgcccaaaatgaaggctttctctaccgcaaaaaggttacaact
tctgaccttgaagctcagcagagaagcccaaacagcaagtcctggacgaacgtgtattgt
gtgctgaaggagggacagctgatcttctacaaggatgctaggcaccaaaccacaccatac
aatgatgagccccctgtagacctaagcaactgctcgtttgatccttcaatgggatacaaa
aagaagaaaaatgtcttcattcttcaaatgaacgatggaaacaacttggcattccatgcc
aaagatgaggaggacctaaaggcctggacatcaaacatcaccaactgtatagccgagcac
gagtccatgggcaagtgggacaagcctggcacgtcgtcaatggaccccgacaactcggag
aggaaggagaagtcagagggggatgcggacgccagatcagagaggtctgagctagctgaa
ggggaggagcggtccgagaaagagaggtcagagaaaggggacggctcagagaagttagac
acgtcagaaatcgccgacaaaatggagggcggggcagggggctccagcacgtccggaaag
agcaaatga
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integrated database retrieval system
