Gasterosteus aculeatus (three-spined stickleback): 120822322
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Entry
120822322 CDS
T07457
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120822322
Membrane trafficking [BR:
gat04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
120822322
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_1
TPR_2
SH3_1
TPR_7
TPR_8
SH3_9
TPR_10
Motif
Other DBs
NCBI-GeneID:
120822322
NCBI-ProteinID:
XP_040037849
LinkDB
All DBs
Position
VII:12608923..12625933
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AA seq
1325 aa
AA seq
DB search
MSARSDRAGGYRGKMSADGLQHRQVAEKTNGHSRKVHGFTRDSSCLRRTVSTCEEKVPAA
LPLLLDVVWGPERLPADRDSQEMLRGKLRNLQADSTEVNALFTELSTHLISIDSEEKVIY
VTFKTFEEIWKFTTYYSIGFLGHCIENLLWDQKFWLSSLEEDIEIKVSVQEDTLHLIYKG
ILMQEGSLFARCSTNQMFDSSTSGGDLYLEKGDIAQFEPPFLGSGWTVLCLADGARGTAP
RPGLELVVPFHQWFLKSCTESILIGDGKPSCDFPLQFASGSCLATAGYDAEGPDELSVAP
GDRIVIVGILVSCCDWFTARKEATGEVGLVKTSLVKPSTDIHNLADVFLDGEEGTFFNPQ
EDKVIEETKALLKKKSENDTGHNYKLDMISYQDADKIIPFSSSSKSQTQQTDLKTNIQRF
LDQGQKSLPPSIVTMNGTLEDTDLNSEAKKPSPPCFIVHPVVEGDNNTEIFILLFAFLEG
RDYKIEFGPLYGLNSELLASSTFTGHSEEDELIAFLGVARETARKKRLLWSQTRLCFLLG
KLCAGRSKFSQARVYFEEALSVPREGFADLRLLASIYSNLVAIYLLQKNTESFFAMTERL
VALLFGTPDCLECLVDNSALKYILKKAILSHNGMAEARACYLLAKHHWTHAEGVRVVPYL
ERLLVLCTETQRTWGISTSHEYLALGRLYSELGLPHLSVSSARRASQHPSATLTNCLSSM
ALLLNNVNRLNGITEQEVTLPPQMAPYLHQALSSKKVQGGGSDQQHVLSHQLTVSLCQLF
CKHRMVGHAISHIHTLIDSNRLPQRLPISVPERNGTLIWLAWLHIDNKQPDVALDILDSV
LASMPEHCTTLQEGVVLNMRGVAFRCMGDLCKAAQSYEAAVDVCQEYEDIPNWAVAQANL
GLLCLKARAKDLAQRHLTQAVQLFSELDGEGHESNFITVLLELGQHYVKQHQLDFGKGCY
EWALLLAINANLLDCQLTATRHLYHLYGCENPDQAQCIIYSQHHVQLLRQTGDRGQEGEA
LEAISQLYLSLGTERAYRAALDATKTSLGIFIDLGQREKEAYGWLQAGKIYHLVDQTELV
DLYVQVAQDVALSTGDTGFILKLLEAAGDIFFNSSQDRDKAITFYRDRALPIAVKSSNVR
SRLRLCNKLTELMLSLKLYGEAMEFAQTSLDISKTLGECLNERVACHRLASLYHCLDQYE
LAEHYYLKTLTLCPTPLLFDEETLYYVRVYQTLGDIIFYDLKDPFDASGYYHLALAAAMD
LGNKKAQLQLCTRLATIYHNFLIDRELSLFFYQKARAFAAELNVRRINISPDQLNSSTSQ
YETTK
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccaggtcagaccgggccggcgggtaccggggaaagatgtctgcagacggcctg
cagcaccggcaggtggcagagaaaacaaacggacacagcagaaaagtgcacggtttcacc
agagattcttcatgtctgaggagaactgtgtcaacatgtgaggaaaaagtcccagcagct
ctgccgctgctgctggatgtggtgtggggtccggagcgtcttcctgcagacagggactca
caggaaatgctgagagggaaactgcgcaatctgcaagctgacagcacagaggtcaacgct
ctgttcacggagctgtctactcacctcatctccatcgacagtgaagagaaagtcatttat
gtgacattcaaaacctttgaggagatatggaaattcaccacatactattcaataggtttc
ctgggtcactgcatagagaatctgttgtgggaccagaagttttggctcagctctttggag
gaggacattgaaattaaggtctctgttcaagaggacacactccacctgatctacaaaggc
attctcatgcaagaaggttcgttgtttgctagatgtagtaccaaccagatgtttgacagc
tctacctctggaggtgatctgtacctggagaagggagacatagcccagtttgagcctccc
ttcctgggctcagggtggactgtcctctgcctggccgatggagcccgaggtactgcaccc
agacctgggctcgagctggttgtcccttttcatcaatggtttctcaaatcctgcacagag
agcattttaattggtgatggtaaaccctcctgtgacttccctctgcagtttgcctcagga
agctgtctggccacagcagggtatgatgctgagggcccggatgagctgagtgtggcgccc
ggtgatcgcatcgtcatcgttggaatcctggtgtcttgttgtgattggttcacagcgagg
aaggaggcaacaggagaagtaggtttggtcaagacaagcctggtgaagccatccactgac
atccacaacttagcagatgtctttctggatggagaggaagggacatttttcaatccgcaa
gaggacaaagtcatagaagaaacaaaggccttattgaagaagaaatctgaaaatgatact
ggtcataactacaaacttgatatgatcagttaccaagatgctgataaaataataccattc
agctcttcaagcaaatctcagactcagcagactgacttgaagacaaatattcagaggttt
cttgatcaaggacaaaagtcattgcccccatccatagtgacaatgaacgggactttagag
gacactgacctcaattcagaagccaaaaaaccaagtcctccctgtttcattgttcacccg
gtggtagaaggagacaacaacacggaaatcttcattctgcttttcgctttcttggaggga
cgagactacaagatagagtttggccccctttatggactgaattctgaactcctggcctcc
tccacctttactggtcactcggaagaggatgagctgattgctttcctgggggttgccagg
gaaacagccaggaagaagcgactcctttggtcacagactcgtttgtgctttctgctgggc
aaactctgtgctggaagatcaaaattcagccaggcccgggtttactttgaggaggccctc
agtgtgccacgagaaggctttgcggacctcaggcttttggccagcatctactccaacctg
gtcgctatataccttttgcagaaaaataccgaaagtttctttgctatgacagagcgactt
gttgccttgctatttgggaccccagactgtctggaatgcctagtggacaactctgctctt
aaatacatcctcaagaaagccattctgtcccacaacgggatggcagaggcacgggcttgt
tatctactggcgaagcaccactggactcatgctgaaggggtacgagttgttccttatctt
gagagactgcttgttctttgcactgaaacacaaagaacatggggcatctcgaccagtcac
gaataccttgccctgggaaggctctacagcgaactcgggcttccccacctcagtgtcagt
tcggcgaggagagcttctcagcatccctctgctacactgacaaactgcctgagcagcatg
gctctactattgaacaacgtcaacagactgaatgggatcacagaacaggaagtaaccctc
ccacctcaaatggctccctatctacaccaagccctttcttctaaaaaagttcagggtgga
ggaagtgatcagcaacatgttttgagccatcagcttaccgttagtctctgccaactcttt
tgcaagcacaggatggttggacacgctatcagccacatacacactctcattgacagtaat
agactcccacagcgactccccatctcagtcccagagagaaacggtaccctcatctggttg
gcatggcttcacattgacaacaagcagccagatgttgccttggatatcctggactctgtc
cttgcttccatgcctgaacattgcactacccttcaggaaggtgtggtcctcaacatgcgt
ggcgtggcatttcggtgcatgggtgacctctgcaaggcggcacagagctacgaggcggct
gtggacgtctgccaagagtatgaggacattccaaactgggcggtagcgcaggctaacctg
gggctgttatgtctgaaggctagagctaaagatctggcacagagacacctgactcaggcc
gtgcagctcttctctgagctggacggagaaggtcatgagtcaaacttcatcacagtactg
ctggagctgggtcagcactatgtgaagcagcaccagctggactttgggaaaggatgctac
gaatgggctctactgctggctatcaatgctaacctgttagactgccagctcactgcaact
agacacctgtaccatctgtatgggtgtgagaatccagaccaggcccagtgtataatctac
agccagcaccacgtccagctgctgagacaaacaggagacagaggacaggagggagaggca
ctggaagccatcagccagctctacctcagtctgggaacagaaagggcatacagggcagcc
ctcgacgccaccaagaccagtcttggtattttcatagacctgggccagagggagaaggag
gcgtacggctggctgcaagcgggaaagatctaccacctagtggaccagactgaactggtg
gacctttacgtgcaggtagctcaggatgttgctctgagtacaggagacaccggcttcatt
ctgaagcttctggaagcggcaggagacattttcttcaacagcagccaggaccgggacaag
gctatcaccttctacagggaccgggctctgcccatcgctgtgaagagcagcaatgttcgt
tccaggctgaggttgtgtaataaattgacggaactgatgctcagtctcaagctttacggt
gaagctatggagtttgctcagacctcactggacatcagtaaaactctgggtgagtgtctg
aatgagcgagtggcttgccatcgtctggcctctctgtaccactgtctggaccagtacgaa
ctggctgaacactattacctgaaaaccttgaccctgtgtccaacacctctgctgtttgat
gaggaaacactgtactatgttagggtgtaccagacgctgggggacatcatattctatgac
ctgaaggatccatttgatgcttcaggctactaccacctggctctggctgcagccatggat
ctgggtaacaagaaggctcagctgcagctgtgcactcgcctcgcaaccatctaccacaac
ttcctaatagacagggagctctctctcttcttttaccagaaggcacgggcctttgccgca
gagctgaacgtgaggaggataaatatctcaccagatcagctgaatagtagcacctcacag
tacgagaccaccaaataa
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