KEGG   Gasterosteus aculeatus (three-spined stickleback): 120822421
Entry
120822421         CDS       T07457                                 
Name
(RefSeq) LOW QUALITY PROTEIN: protein Shroom2-like
  KO
K18625  protein Shroom
Organism
gat  Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:gat00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:gat04812]
    120822421
Cytoskeleton proteins [BR:gat04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Others
     120822421
SSDB
Motif
Pfam: ASD2 PDZ PDZ_6
Other DBs
NCBI-GeneID: 120822421
NCBI-ProteinID: XP_040038037
LinkDB
Position
7:1278674..1309903
AA seq 1694 aa
METVEQLVSFHHVQVQLSGGAPWGFTLKGGLEHGEPLIITKIEDGGKAALCAKLRVGDEL
VNINGSALYGSRQEALILIKGSYRLLKLAVRRRSVPVLRPHSWHLAKLSEPPLPLPPPPP
PPPPQSPPPCLPAAADSPPLPPPPPPLTAMQLHPGSYPLPWHAADNSDLSLPWGQLSRPY
SSTDRSSSLGSMESLDAPPPAARSSPGDPALFHNKRDSAYSSFSASSNASDYAAAPLRPG
DACSMDNLAAADASTPAAEAPDQAQLVSPKSRSLTRPRARTAQVKERPSSCCYEGGDFQT
GEEDEPSSASDQDGQLQGRPGFGPHGASKRCVSASVEIAGVSSYFEENKSSPDAESGMLN
GFSAPEDGVKGGTLKDSQRVRRRAGCDARADKDFVSAAASGHVPAAPPRPSSSPTESSVG
PGEESRVAHGPPEQPAADQFSALRGRSDVSPSDVSTWSPPSPRGDRDASHDPVHAPSRQW
GGGGRCATPGSGDQGTGVGGGHHHPGAAPSVPGDAAAPSAQGTASSEQILQRDFQPLRAA
ASVDTLLGEHAESDKGGKREEAAAGEADMRKSAASKNQRRNRRRGERFATNLRNEIQRKK
AQLQRSRGPGGLLCSGETVQEEEGPDLSEEGAELKLPPRQRSAPIAFASPAGPPDRAQDP
ETARTWRDSNEDVSRTWAPTRAPNPAPCRSVQILDPGLPTRRGVASGGEDAAGFSERTED
SRQAARPPPASPPGLPRDEAPRSAFHPVNAPARLREDQQPLHPGHRARSYTQTEMHPARQ
QETAKLNRKCSLTERDSSWRRESRPPEHHHHQHHHQGPRGRRQADDDRSAHSSAPPPAPL
SLRGRAMSENDLRFASGGGGGHRWPSVPVATSQTLSEVEEGVGGVGGVEAARANRKKTPP
PPRPPPPKWEQFHRRRASHHALFASSPPPGSTPPSMDAAESRPRSSSCVPPPETSRLRSY
SLPPERWEVAEGCPRCSCSRTRELPHASSNQNPPLMQEQHFSHASSNQNPPLMQEQHFSH
ASSNQDPPLMQEQHFSHASSNQNPPLMQEQHFSHASSNQDPPLMQEQHFSHASSNQDPPL
MQEQHYSHVSSNQNPPLMQEQHYSHASSNQMQARMQEQRFSDVSSNRTQAQMPEQHFSHA
SSNQNPPLMQEQHYSHASSNQDPPLMQEQHYSRASSNQNTTDAVTTLQLRLIQSESSLNP
WRWRFTVAPPSPMFSRRSFRPVAPPPKERDQKGMYGEQQERVEVRLPPPPAPPAEISVSS
SSEGRVQDRVTAKPEVRPGAEWDRAASPRVHSDPSGGVLLQSYLSMDHEQRQLRATGGFQ
SIGEPQKTPEPGTESETTLSPSPAHSLDADLDVPMETDIDDFQEHEDGPPAKDGPITSEL
PCFALPVTVLETDIDTEASPPGSLEGEGLEEELEEEEELRAGEAERLSLEELFPQSCEGE
PGRESWRGAYRTTEHNADSLDRRSGASSSCSSYYSTSAAKAQLLSQMKDFTDNNREEDDE
LTYKKQLMESLRKKLGVLREAQRGLQEDIRANAQLGEEVESMVVAVCKPNEVDKFRMFIG
DLDKVVSLLLSLSSRLLRVEAALETLHPDAELHDRLPLQEKKHQLMRQLSEAQDLKDHVD
RREQAVSRVLARCLSPELHRDYSHFVKMKAALLVEQRQLEDKTRLGEEQLRGLRESLGLG
LGIGMGMSMGYGHY
NT seq 5085 nt   +upstreamnt  +downstreamnt
atggagacggttgagcagctcgtctccttccaccacgttcaggtccagttgagcgggggc
gcgccttggggcttcacgctgaaaggaggactcgagcacggggagccgctcatcatcacc
aagatcgaggatggagggaaggccgccctgtgcgccaagctgagggtcggcgacgagctg
gtgaacatcaacggctcggcgctgtacggcagccggcaggaagccctcatcctcatcaag
gggtcgtaccgcctgctgaagctcgccgtcaggaggcgcagcgttcccgtcctcaggcct
cactcctggcacctggcgaagctgtcggagccgccgctccccctccctcctcctcctcct
cctcctcctcctcagtcccctcctccctgcctccccgccgccgccgactcccctcccctc
ccccctcctcccccccctctgactgccatgcagctccaccccggctcgtacccactaccc
tggcacgcagcagacaacagtgacttgtccttgccgtggggtcagctgtcgcgaccgtac
tcctccaccgaccgaagcagctccctgggctccatggagagcctggacgcgccgccgccc
gccgcgcggagctcccccggcgaccccgccctcttccacaacaagcgggactcggcctac
agctccttctccgccagctccaacgcctccgactacgccgccgcgccgctgcggcccggc
gacgcctgctccatggacaacctcgccgccgccgacgcctcgactccggccgccgaggcc
ccggaccaggcgcagcttgtctcgcccaagtccaggtccctgaccaggcccagagcgagg
accgcccaggtgaaggagaggccttcgtcctgctgctacgagggaggggacttccagacg
ggggaggaagatgaaccctcctctgcctccgaccaggacggacagcttcaggggcgaccg
ggcttcgggccacacggcgccagcaagcgatgcgtctcggcttccgttgaaatcgccggc
gtttcttcttactttgaggaaaacaagtcgtccccggatgctgaatcagggatgctgaat
ggcttttccgcaccagaggacggcgtcaaaggcgggactctgaaagactcgcagcgcgtc
cgaagacgcgccggctgcgacgctcgcgctgataaagacttcgtctcagcggcggcctcg
ggtcacgtccccgccgcgccccctcggccgagttcctcgccgacagaatcctccgtcggg
cctggagaggagtctcgcgtggcgcacggcccccccgaacagcccgcggccgatcaattc
tcggcgttgcgaggtagaagcgacgtctctccctccgatgtctccacgtggtcccctccg
tctcctcgcggagaccgggatgcttctcacgaccccgtccacgcgccctcaaggcagtgg
ggggggggcggccgctgcgcgaccccgggatctggggatcaggggacgggtgtgggcggc
gggcaccaccaccccggggccgctccgagcgtccccggggacgccgctgcaccctccgcc
caggggacggcgagctccgagcagattctgcagagggactttcagcctctgcgcgccgcc
gccagcgtggacacgttactgggggagcacgcggagtcggataaaggcggtaaaagggag
gaggcggcggccggcgaggcggacatgaggaagtcggccgcgtccaagaaccagcggcga
aaccgccgtcgcggcgagcggttcgccaccaacctccgcaacgagatccagaggaagaag
gcccagcttcagaggagccgggggccgggggggctgctctgcagcggggaaaccgtccag
gaggaggagggtccggacctcagcgaggagggggcggagcttaaactgcctccccggcag
aggagcgccccgattgcattcgcctcacctgccggcccccccgaccgagcacaggacccc
gagacggcgaggacctggagggactccaacgaggacgtctcgcggacctgggcgccgacc
cgcgctccaaaccccgccccctgcaggtccgtccagatcctggacccggggctgccgact
cggcgcggcgtcgcgtcgggaggggaggacgccgctggtttttccgaaagaaccgaagac
tcccgacaagccgcgcggcctcccccggcgtccccacccggcctcccccgggatgaggcc
ccgaggtcggcctttcatcccgtcaacgcgccggcccgcctccgcgaggaccagcagccc
ctccacccgggtcacagggcgaggagctacacccagacggagatgcatcccgcccggcaa
caggaaacggccaagctcaacaggaagtgcagcctgacggagagggactccagctggagg
cgggagtccagacccccagagcaccaccatcatcagcaccaccaccagggtccccggggc
cgcagacaggccgatgacgatcgcagcgcgcactcgtctgctccgcctccggcgcctctc
tcgctgcgagggcgggccatgtccgaaaacgacctccgttttgccagcggcggcggcggc
ggccaccgctggccgtccgtgcccgtggcgaccagccagaccctgagcgaggtggaggaa
ggagtgggcggagtcgggggagtagaagccgcccgcgcgaacagaaagaagacgccgcct
ccgccgagaccgccgccgccgaagtgggagcagttccaccggcggcgtgcgtctcaccac
gccttgttcgcctcctctcctccgcccggctccacccctccctccatggacgccgcagag
tcacgcccccgctcctcctcgtgcgtccctccacccgagacttcccgactgaggtcctac
agccttccgccggagagatgggaagtggccgagggatgcccgcgatgcagctgcagccga
accagggaactgccccacgcctcgtccaatcagaatccaccactgatgcaggaacaacac
ttcagccacgcctcgtccaatcagaatccaccactgatgcaggaacaacacttcagccac
gcctcgtccaatcaggatccaccactgatgcaggaacaacacttcagccacgcctcgtcc
aatcagaatccaccactgatgcaggaacaacacttcagccacgcctcgtccaatcaggat
ccaccactgatgcaggaacaacacttcagccacgcctcgtccaatcaggatccaccactg
atgcaggaacaacactacagccacgtctcgtccaatcagaatccaccactgatgcaggaa
caacactacagccacgcctcgtccaatcagatgcaagcacggatgcaggaacaacggttt
agcgatgtctcgtccaatcggacgcaagcacagatgccggaacaacactttagccacgcc
tcgtccaatcagaatccaccactgatgcaggaacaacactacagccacgcctcgtccaat
caggatccaccactgatgcaggaacaacactacagccgcgcctcatctaatcagaacacc
actgatgcagtaacaacactacagctacgcctcatccaatcagaatcaagcctcaacccc
tggaggtggcgtttcaccgttgctccgcccagtcccatgttctccaggaggagcttcagg
cccgtagctccgcccccaaaagagagggaccagaagggcatgtatggcgaacagcaggag
agggtggaggtccggcttcctccgcctcccgctccaccagcagagatcagcgtgagcagc
tcatccgaggggagggtccaggacagggtgacggcgaaaccggaggtgagaccaggagcc
gagtgggacagagccgcgtcccccagagttcatagcgacccaagcggaggcgtcttactc
cagtcttacctctccatggaccacgagcagcggcagctccgtgctacagggggcttccag
agcatcggcgagccccagaagacccccgaaccggggacggagtcggagacgacccttagt
ccgagccccgcccacagcctggacgcggacctggacgtccccatggagacggacatcgac
gacttccaggagcacgaggacggaccgccggcgaaggacgggccgatcaccagcgagctg
ccttgcttcgcgctgccggtgacggtgctggagacggacatcgacacagaggcctcgccg
ccgggctcgctggagggggaggggctggaggaggagctggaggaggaggaggagctccgg
gccggagaagcagagaggctgagcctggaggagctcttcccccagagctgtgagggggag
ccggggagggagagctggaggggggcctaccgaaccacggagcacaacgccgacagcttg
gacaggcggtccggtgcaagctccagctgttcgtcctactacagcacgtcggccgccaaa
gctcagctgctctctcagatgaaggacttcaccgacaacaacagggaggaggacgacgag
ctgacctacaagaagcagctgatggagagcctccgcaagaagctgggagttctgagagag
gctcagaggggactgcaggaggacatcagagccaacgcacagctgggggaggaggtggag
agcatggtggtggccgtgtgcaaacccaacgaggtggacaagttccgcatgttcatcggc
gacctggacaaagtggtgagcttgttgctgtcgctgtccagcaggctgctgagggtggag
gccgccctggagacgctgcaccccgacgcggagcttcacgacaggctccccctgcaggag
aagaagcatcagctcatgaggcagctgtccgaggcccaggacctgaaggaccacgtggac
cgccgagagcaggccgtcagccgggtgctggcccgctgcctctcccccgagctccaccgg
gactacagccactttgtgaagatgaaggccgccctgctggtggagcagaggcagctggag
gacaagacccggctgggggaggagcagctgagggggctgagggagagcctgggcctgggg
ctcgggatcggcatgggaatgtcgatgggatacggacattactga

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