KEGG   Gasterosteus aculeatus (three-spined stickleback): 120822433
Entry
120822433         CDS       T07457                                 
Symbol
col4a5
Name
(RefSeq) collagen alpha-5(IV) chain
  KO
K06237  collagen type IV alpha
Organism
gat  Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04382  Cornified envelope formation
gat04510  Focal adhesion
gat04512  ECM-receptor interaction
gat04518  Integrin signaling
gat04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:gat00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    120822433 (col4a5)
   04518 Integrin signaling
    120822433 (col4a5)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    120822433 (col4a5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    120822433 (col4a5)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    120822433 (col4a5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gat04147]
    120822433 (col4a5)
   00536 Glycosaminoglycan binding proteins [BR:gat00536]
    120822433 (col4a5)
Exosome [BR:gat04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   120822433 (col4a5)
Glycosaminoglycan binding proteins [BR:gat00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   120822433 (col4a5)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 120822433
NCBI-ProteinID: XP_040038061
LinkDB
Position
VII:complement(1500816..1526250)
AA seq 1683 aa
MKRPLGSLRRLAAPLLLFALCVAVQRSESAACHGCVGSTCDCSGVKGTKGERGFPGLTGQ
PGVPGFPGPEGPIGGRGEKGSDGLQGPYGPKGIRGPSGLPGFPGTPGLPGLPGQDGPPGP
RGVAGCNGTKGEIGYPGNSGIPGQPGRSGPPGVPGEKGDPGDVISANRFGQQGAVGLPGL
PGIPGAPGPAGLQGPLGPPGPRGYEGSPGPPGLPGPKGNMGLNFQGPKGMKGERGTTGPP
GPPGQVGEQKEAKETVIQRGDKGDPGFPGPPGDPGYPGNPGPSGGPKGSKGEPGEAGKRG
KSGKDGDPGPPGFPGGKGDPGLPGPAGRDGERGLKGDRGYPGPPGVIIGGTPGGLIGPKG
EPGYPGSAGIKGDRGQPGLSGPPGEPGRPGTGGGGQPGPPGYPGERGQKGDQGTVGISLP
GPPGRPGSSGPPGPQGPPGPPGSSSGGTDCSTGVPGIPGVQGERGYPGDPGFKGEKGDTC
VNCFRDTSGIPGPPGLAGQPGFPGSPGSPGIKGDRGFSGTPGAVGPPGNPGPLGSPGFPG
EKGDPGEVIAVDGGRGEKGDTGFPGSPGLPGLDGRPGRDGQPGSPGAKGAPGSLLVKGER
GPPGEPGSLGIPGDRGPPGGPGYGPPGSSGEKGVQGVSGRPGGPGSPGSKGEPGVAVSEK
GNPGDRGPPGTPGQPGLRGNPGQPGQDGFPGSPGTKGEPGLPGIGLPGPPGVKGFPGVAG
QPGSPAAPGRPGVDGLPGQPGFPGAKGEPGFGLPGPPGVPGAPGAKGFYGPKGDPGFPGG
PGSPGRSGFDGSPGSKGEPGPSGPPGARGPPGIPDAGAVGPPGPPGLPGQMGPPGYPGSN
GGKGDPGPPGLDIPGLPGDRGSPGFPGSPGAVGAPGPLGGPGRDGSPGQPGQKGDMGLMG
SPGPSGGPGIPGGPGAPGPKGDSGFPGRDGNPGGTGFKGDRGEPGLQGPPGSSQGPENLK
GSKGEPGQPGSPGFSGEKGIAGLPGDPGPGGLDGRPGSPGPPGPKGDPGLSGGPGGPGAP
GLKGSMGEMGFPGPSGQKGLSGQPGRSGSPGQPGGPGFPGAKGEPGSAGVGPPGLSGQKG
EPGQSGFPGGSGLKGTPGSPGLPGVPGGPGPKGDPGLPGFQGSPGSPGPKGLDGGFGSPG
LPGAPGRPGESGRPGGPGFPGDKGQAGRDGIPGPAGIKGDPGLPGYGGPGSPGLPGLPGS
KGDPGLPGPPGVNGFPGSKGDPGFPGSPGPSGNPGPAGPPGQALQGPKGLQGSPGPPGRG
GPSGPPGSPGPQGPRGPAGSGGVKGEKGIAGAPGQPGFAGQKGDSGVPGFPGPPGQPGGS
GQKGDIGLPGVPGFPGPKGDLGAPGGNGLPGDPGGVGLPGPPGEPGFVRDPGQYKGARGA
PGVQGPPGGRGLSGTPGRDGRPGEPGEIGAPGPEGPPGFSGPPGRKGDNGPAGQPGQRGF
SGPPGSDGPPGVPGPPGSGSVAHGFLITRHSQGQDVPFCPQGTGLIYDGYSLLYVQGNER
AHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPSSMAPITGERI
KPFISRCAVCEAPAMVIAVHSQTIQIPSCPSSWEALWIGYSFMMHTSAGAEGSGQALASP
GSCLEEFRSAPFIECHGRGTCNYYGNSYSFWLATVEPSEMFRKPQAETLNTSNLVMRQCY
EPL
NT seq 5052 nt   +upstreamnt  +downstreamnt
atgaagcgacccctggggagcctgcgacggctcgcggcgcctctgctcctcttcgccctg
tgcgtcgcggtgcagcgatccgagtctgcggcttgccacggctgcgtgggatccacatgt
gactgcagcggagtgaaaggaaccaagggcgagcggggtttcccgggtctcaccggacag
cccggagtcccggggttccccggccccgaggggccgatcgggggcagaggagagaagggt
agtgatggactgcaaggaccttatggtccaaagggaatcagaggaccgtctggattgccg
ggatttccaggaacaccaggacttccgggtctgccggggcaggacggacctccgggcccg
agaggtgttgcaggctgcaacgggacgaagggggaaattggttacccgggaaattcagga
attcctggccagccgggccgatctggcccccctggtgtgccaggagaaaagggcgaccca
ggtgacgtgatctccgccaatcgctttggacagcagggagcggtgggattgcccggattg
cccggcattcctggagctcctggacccgccggtctgcaaggtcccctcggtcctccagga
cccagaggctacgagggttctccaggtcctccaggtctccccggaccaaaaggaaacatg
ggattgaacttccaagggcccaaaggaatgaagggtgaacggggcacgacaggacctcct
ggtcctccggggcaagttggggagcaaaaggaggcaaaagagaccgtgattcagagagga
gacaagggtgatccaggtttccccggtcccccaggtgacccaggctacccaggaaaccct
ggtccctcgggtgggccgaaaggaagcaagggagaaccaggtgaagcaggaaaacgaggc
aaatcaggcaaagatggcgaccccggccctccaggcttccccggaggtaaaggagaccca
ggcctgccaggccctgccggcagagatggagagagagggctgaaaggtgatcgtgggtac
ccaggcccgccaggagtgataatcggtgggacaccaggaggtctgattggcccgaaagga
gagcccggctaccccggctcagccggaatcaaaggagaccgcggccaaccaggcctatcg
ggacctccgggggaaccgggtcgcccgggtactggaggtggaggtcagcctggacctccc
ggctacccaggagagagagggcagaagggagaccagggcaccgtagggatttctctgcca
ggtccgccaggacgtccggggtcttctgggcccccgggcccgcaggggccccccggacct
ccgggctcttcttccggaggaacagactgctccactggagtgcccgggattcccggcgtg
cagggagagagaggctacccaggagaccccggctttaaaggcgaaaagggcgacacctgc
gtgaactgcttcagagacacctccggcatccccggaccaccgggactcgcgggacaaccc
ggattccctggatctcccggctccccagggatcaaaggagaccgaggattttcaggaacg
cctggggccgtcggaccccctggtaaccccggccctctaggttccccgggattccccgga
gagaagggagacccaggcgaggtcatcgcagttgacggtggcaggggagagaagggtgac
accggtttccccggatcgcccggccttcccggtctggacggtcgacccggtcgcgacggc
cagccgggctctcccggcgccaaaggagcacccggctctctgctggtgaaaggagaacga
gggccccccggtgagcccggctccttgggtatcccgggagacaggggtcctccgggaggc
cctggttatggacctccgggatcatcaggagagaaaggagtccagggcgtctcaggaaga
cctggaggtcccggttcgcccggtagcaaaggggaaccgggcgtggcggtgtctgagaag
ggcaatccgggagataggggacctccaggcacgcctggacagcccggcttacgaggtaac
ccgggtcaacccggacaggacggtttccccggttcaccgggaactaagggggagcctgga
ctccccggcatcggactcccgggaccccctggagtcaaagggttcccaggtgtcgcaggc
cagccaggatctcctgccgcaccaggcagaccaggagtagatggacttcctggccagcct
ggatttcctggagcaaagggggagcctggctttggccttcctggccccccgggtgtacca
ggagcacctggagcgaagggcttctacggaccgaaaggagaccccggcttccccggaggc
cccggctcacccgggcgctctggatttgatggctctccgggatcgaaaggtgagcccgga
ccatcgggcccacctggagctcgtggcccacctggaatccccgacgccggtgcagtgggg
ccgccaggaccacctggcctccctggccaaatgggacctccaggatatcccggatcaaac
ggagggaagggagacccgggccctccaggtctagacatcccaggtctgccaggagacaga
ggaagtcccggcttcccaggttcccccggagcggtcggagcgccgggacctctcggagga
cctggacgggacggctcgcctggtcaaccgggtcagaagggagacatgggtctaatggga
tccccaggaccctctggaggaccaggaatcccaggagggcccggcgcccccggacccaaa
ggcgactctgggttccccggcagagacgggaaccctggcggtaccggttttaaaggtgac
agaggtgaacctggcctccagggacccccaggaagcagccagggaccggagaatttaaaa
ggatccaaaggagaacctggacaacccggttcaccaggtttttcaggtgagaaaggcatc
gctggtctccccggtgaccccgggccggggggattggatggacgtcctgggagtcccgga
ccaccaggtcccaagggagatcctggtctctcaggtgggccaggtggtcctggagctcca
ggactaaaaggcagcatgggagagatgggtttcccaggaccatctggacagaagggtcta
tcaggtcagccgggtaggtctggatccccgggacagccgggaggacctggtttccctgga
gctaaaggtgaaccaggctctgctggagttggacccccgggactatcaggacagaagggg
gaaccaggtcagtcagggttcccaggaggttcaggacttaaaggaacaccaggatcaccc
ggtctcccaggtgttccaggagggccagggcccaaaggtgaccccgggctcccaggattc
caaggttcacccggtagccccggtcctaagggtcttgacggtgggttcggtagcccaggt
ctccccggagctcccggtagaccgggagaatccggtcgaccaggaggaccagggttccca
ggagacaagggccaggcaggtcgggacggcatcccgggaccggccggaatcaaaggagac
ccagggcttcctggttatggtggacccggctctcctgggcttcccgggctgccaggttcg
aagggagacccgggtcttcccggcccacctggggtcaacggattcccaggatccaaagga
gaccccggtttccccggatctcctggcccttcaggcaaccccggtccagccgggcctcca
ggacaggctctgcagggccccaaaggactccaaggatcccctgggccaccagggagagga
ggtccctcaggtcctccaggctcccctggccctcagggtccccgagggcccgcaggaagc
ggcggcgttaagggagagaagggcattgccggcgctcctggacagcccggctttgctgga
cagaagggagacagcggcgttcccgggttcccaggcccccctggtcagcctggaggttca
ggtcaaaaaggagacatcggtcttcctggcgttcctggattccccggaccgaagggcgac
ctgggagccccgggaggaaacggccttcctggagaccctggaggtgtcggacttcctggc
cctcctggtgaacccggcttcgttcgggatcccggtcaatacaagggagccagaggagcc
cccggggttcagggcccgcctggtggtcgaggactttccggcacccccggccgagacgga
cgtccaggtgagcctggtgaaatcggggccccgggtccagagggtcctcccggcttcagc
ggcccacccggcaggaagggagataacggaccagctggtcagcccggtcagcgtggcttc
tctggtccccccggttcagacggccctccgggtgtccccggccctccgggatcgggttcc
gtcgcccacggcttcctgatcacgcgccacagccagggccaggatgtgcccttctgcccc
caagggaccggcctcatctacgacggctactccctgctgtacgtgcagggcaacgagagg
gcccacgggcaggacctcggcacggccggcagctgcttgcgccggttcagcaccatgccc
ttcatgttctgcaacatcaacaacgtctgcaacttcgcctcccgcaacgactactcctac
tggctgtccacgcctgagcccatgccctcgtccatggcccccatcaccggagagcgcatc
aagcctttcatcagcaggtgtgcagtgtgtgaagctccggccatggtgatcgcggtccac
agtcagaccatccagatccccagctgcccttcaagttgggaagctctgtggatcggatac
tccttcatgatgcacaccagcgcgggcgcggagggctccggtcaggccctggcctccccc
ggctcctgcctggaggagttccgcagcgccccgttcatcgagtgccacggccgagggacg
tgcaactactacggcaactcctacagcttctggctggccaccgtggagccgtccgagatg
ttcaggaagccccaggcggagactctgaacacgagtaacttagtgatgcggcaatgctac
gagcccctctag

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