Gasterosteus aculeatus (three-spined stickleback): 120822447
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Entry
120822447 CDS
T07457
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120822447 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120822447 (nup98)
03036 Chromosome and associated proteins [BR:
gat03036
]
120822447 (nup98)
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120822447 (nup98)
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
120822447 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
120822447
NCBI-ProteinID:
XP_040038080
LinkDB
All DBs
Position
VII:complement(30417554..30436002)
Genome browser
AA seq
1847 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGTSSTFGQPNAGFGATGGFGTSAFGATANTGGLFGATQNKPAG
GLFGSSTFSQPAAPAANAGFGFGAATGTTTSLFGNTGTGASGGLFSQPSNAFGPGKPTSF
GSFGTNTSAGGLFGATNTASNPFGGGAVASLFGASGFTGTAQQQQQQQQPGTTVKFNAPT
GSDTMVKAGVTTSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPTNPMVAPAGGLFG
APAATSTAATGLFGAATPNTNFSFGQNKTTFGAAPAAAAGVFGAAAGGLFGQPAPQQASS
LFKPFGQTTTTPSSGFSFGNTNSMGQANTSTMGLFGNTAAPQAGGLFGAAQPSAATGFGT
TTGLFGQPNAGFGAVGTQQSLFGNKAAGFGTATTSAPSFGTGTGLFGNKPTLTLGTGTNT
STFGFGANPTAGSLFGAKPATGGLGTALGTSFGAVGTGQASLFGNNQGKLGATMGTFGAT
AFNSGANTMGFGAPQQPVALTDPSGTASQQALLQQQLSVLAYSPYGDSPLFRNPLSDPKK
KEERLKPTNPTAQKALTTPTHYKLTPRPATRVRPKALSSSGASKSQLFDGLDDDEPSLTN
GAFVPRKSIKKLVLKNLNSSQYNSPQNSSPPSKETDDLASPPEYPQNGHSHMQDEGEEMP
GPSGRTDDDPEVTQFYVNPIAKPLPQGRVQASLQDTISDLNMHKPARGAGLELSSDDVSA
SLGEESLQEDREEEEEPQLESQQSPHPAGIVLNRVGYYTLPPMEDLADMVDENGDCVVEN
FTVGRKGYGSIFFPGEVNVAALNLDEVVHFRRKEVIVYPDDKNKPLEGEGLNRRAEVTLD
GVWPNDKTACTQIRCPDRLTEMNYEGRLEKASRKQGARFLEYRAETGSWVFEVAHFSKYG
LQDSDEEDDVPLNADPKKLKTMSLPPARLPPPSQQQAAPQAQSPVVVEIPGGVAELDSDM
ADITQSFPTESMLGDEDDCNGVLLARGGDWTGRKLGGLVPVEHDGVSSSGHMASSLGINP
HTLQIMKASLFAEDDDEGDAPREQWPTTAEVSSPRLVVPGTQTRPSVRGLLQARFSSGLL
SQLTDSPRPPLLPPPLAWGSPASKEPSHWAGLGPSSFLLPPRAPEPPVRTVGVRRLGGPV
ALKESVTLGKGALLMDAALFAGRSFRVGWGPGWTLAHCGQQLSSQADGPPGRRGLTKTDF
SFLPKPARSKRLTESSYKVVLEQLVGLEPPLTSSEVEEEEEESWAVLQRPLEICLRNSTV
NAADHSACPLVRPRLGVAALHEYAEWIRELSARHGEADALLGQWAEVWTLCEALWGRLGA
SDDPEPGTEAPGDYEQQLERRRSFSAWLSRGAARRVEAEAALAGKGRHTDAVFSYLTGNR
ISEACRLAQREGDHRLSLLLSQAAGSQYCRDLLGLQLADWSRMQTDSYLPEERLRIFTLL
SGKPVWQSSDSVVNVCSELDWKRCLAVHLWFMLPPTASVADALARYEAAFQGSPDGGKYA
CPPQPPYLEAEQPDMMEEEPERPLHDLCFHLLKLYSDRHYSLQQLLDPLTVTWQRLDYRL
SWHLWGVLQALHYSHLSASRQGLLHASYAAQLESAGLWHMAVFILLHIPDHIQRERAVRA
MLTLHCCLQETPESLRRERFLTEKLLIPDQWLHEAKATRARRDGDRQQEALHLYRAGSWT
QCHRLLIRHLASDCIINDNHDYLLEFLEGLAVPEHSATIQDWDTAGRVYLDYIRVVNTLQ
DIQQVEAAGFELERLYGDVTSLCSRIELLPCSSARDRLAQSEMAKRVANILRVVLSLQQG
DAPPDPLAGGLGRLALHIGRLPMPEDYTLEELRGLTQSYLRQHVLSQ
NT seq
5544 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagtcattcggcactcccttcggtggagggacgggggggttcggcacctcg
tccacctttgggcaaccaaacgctggtttcggggcgaccggaggcttcgggacgtctgcg
ttcggggcgaccgccaacaccggaggcctgtttggagccacgcagaataaacctgcaggt
ggtctgttcggctcgagcaccttcagccagccagcggcgcccgccgccaacgccggcttt
ggttttggagcggcgaccggcaccacaaccagcttgtttggcaacaccgggaccggcgcc
agcggcggcctcttctcccagcccagcaatgccttcgggcccggcaagcccacgtcgttt
ggaagctttgggaccaacaccagcgccggcgggctgtttggagccaccaacaccgcctcc
aacccgttcggtggaggcgccgttgcctccctgttcggagcctccgggtttaccggcacc
gctcagcagcagcaacagcaacagcagccaggaaccaccgtcaagttcaacgctcctaca
ggaagtgacaccatggtgaaagccggcgtgaccaccagcatcaacacgaagcaccaatgc
atcacggccatgaaggagtacgagaacaagtccctggaggagttgaggctggaggactac
caggctggcaggaagggcccgaccaatccaatggtggcgccggctggcggcctgtttggc
gcccccgcggcgacatccaccgccgccaccgggttgtttggcgccgccacccccaacacc
aacttctccttcggtcagaacaagaccaccttcggggcagcgccggcagcggcggctggc
gtttttggcgcagcggccggcgggctgttcggtcagccggccccccagcaggccagcagc
ctcttcaagccctttggccagaccaccaccacgcccagcagcggcttctcctttggcaac
accaatagcatggggcaggcaaacaccagcaccatgggtctgttcgggaacacagcggcc
ccccaggcgggcggcctgttcggcgccgctcagcccagcgccgccaccggctttggcacg
acaaccgggcttttcggacagcccaacgccggctttggcgccgtggggactcagcagagt
ttgttcgggaacaaggcagccgggttcggcaccgccaccaccagcgctccgtccttcggc
accggcaccgggctcttcggcaacaagcccaccctcacgctgggcaccggcaccaacacc
tccaccttcggttttggcgctaaccccaccgccgggagtctgttcggcgcaaagccggcc
actggcgggctggggacggcgctggggaccagcttcggagcagtgggtacggggcaggcg
tctctctttgggaacaaccagggcaaactgggagccaccatgggaaccttcggcgccacc
gccttcaacagtggagcaaacacgatggggtttggagctccacagcagccagtcgcgctc
actgatccgagtggcacggcctcccagcaggcattgctgcagcagcagctcagcgtcttg
gcctactcgccgtacggagactctccgttgttcaggaacccgctgtcggaccccaagaag
aaggaggagcgtctgaaaccgaccaatccgacggcccagaaggctctgaccacgcccacc
cactacaagctgaccccccgcccggcgaccagggtccgccccaaagcgctgtcctcgtcg
ggggcgtccaagtcgcaactattcgacgggctggacgacgacgagccgtcgctcaccaac
ggagcctttgtacccaggaagagcatcaagaagctggtgctgaagaacctgaacagcagc
cagtacaacagcccccagaacagcagcccccccagcaaagagacggacgacctggcttca
cctccagagtacccgcagaacggacacagtcacatgcaggacgagggggaggaaatgccg
ggtcccagcggccggacagacgacgacccagaggtcacccagttttacgtcaaccccatt
gccaagcccctcccacagggccgcgtccaggccagcttgcaggacacgatcagcgacctc
aacatgcacaaaccggcccgcggcgcaggcctggagctgagcagcgacgacgtgtcggcg
tctctgggggaggagtctctgcaggaggacagggaagaggaggaggagccacagctggag
tcccagcagtctcctcacccagcaggcatcgtcctgaaccgcgtgggttactacaccctc
ccccccatggaggacctggccgacatggtggatgaaaatggagactgcgtggtggagaac
ttcactgtagggcggaaaggctacggctccatcttcttcccgggcgaggtcaacgtggcg
gcgctgaacctcgacgaggttgtgcacttccggcgtaaagaggtcattgtgtacccggat
gacaagaacaagcctctggagggggaggggcttaacaggcgagctgaggtgaccctggac
ggcgtctggccgaacgacaagacggcgtgcactcagatccggtgccccgaccgcctgacg
gagatgaactatgagggccggctggagaaggcctcgcgcaaacagggcgcccgcttcctg
gagtaccgcgccgagaccgggtcctgggtgttcgaggtggcccatttctccaaatacggc
ctccaggactctgacgaggaggacgacgtcccactcaatgccgacccaaagaagctgaag
acgatgtcgcttcctcccgccaggctgccccccccctcccagcagcaggcggcgccgcag
gctcagtcgcccgttgtcgtggagatcccagggggcgtggccgagctggatagcgacatg
gcagacatcacccagagcttcccgacagagagcatgctgggagacgaggacgactgcaac
ggcgtcctgcttgcaagggggggggactggacgggcaggaagctcggcggtttggtcccc
gtggagcacgacggcgtctcctcatccggccacatggcgtcctcgctggggatcaacccg
cacacgctgcagatcatgaaggcatcgctgttcgccgaagacgatgatgagggcgacgcc
ccccgcgagcagtggccgaccacggccgaagtctcgtcccctcgactcgtcgtgccgggg
actcagactcgaccctctgtcaggggtctccttcaggctcgcttctcctccggcctcctg
tctcagctgacggactccccccgcccccccctcctccctcctcctctggcctgggggtct
cccgcatccaaagagccctcccactgggccggcctggggccctcgtctttcctgctgccc
ccccgagccccggagccccctgtgcggacggttggcgtgcggcgcctgggtgggccagtc
gccctcaaagagtcggtcactttggggaagggggcgctgctgatggacgccgctctgttt
gcgggccggtccttccgggtggggtggggtcccggctggacgctggctcactgcggccag
cagctgagctcgcaggcagacgggccgccgggccgccgcgggctcacaaagacggacttc
agcttcctgcccaaaccggccaggagcaaacgactcacggagagctcctacaaggtggtg
ctggagcagctggtgggtctggagcctccgttgacgagcagcgaggtggaggaggaggag
gaggagagctgggcggtgctgcagcgccccctggagatctgtctgaggaacagcacagtc
aacgccgctgaccactccgcctgtccgctggtgcggccacggctcggcgtggcggcgctg
cacgaatacgcagagtggatccgagagctgagcgcccggcacggggaggcagacgccctg
ctgggtcagtgggccgaggtgtggacgctgtgcgaggcgctgtggggccggctcggcgcc
tcagacgacccggagcccggcaccgaggcgcccggcgactacgagcagcagctggagagg
aggcggagcttctcggcctggctgtcccggggcgccgcccgccgcgttgaagcagaggcg
gcgctggctgggaagggtcgccacacggacgcagtcttcagctacctgacgggaaaccgc
atcagcgaggcgtgccgcctggcgcagagggaaggcgaccaccggctgtccctgctgctc
tcgcaggccgccggctcccagtactgccgagacctgctgggcctgcagctcgccgactgg
agccgcatgcagacggacagctacctgcccgaggagcggctccgcatcttcacgctgctg
tcaggcaaacccgtgtggcagtcgtcggactcggtggtgaacgtctgctccgagctggac
tggaagcgctgcctggccgtgcacctgtggttcatgctgcctcccaccgcctccgtggcc
gacgccctcgccagatacgaggccgccttccagggctcgcctgacgggggaaagtatgcc
tgcccgccgcagcctccgtacctggaggcggagcagccggacatgatggaggaggagcct
gaacggccgctgcacgacctctgcttccaccttctcaaactctacagcgacaggcactac
agcctgcagcagctgttggaccctctgaccgtcacctggcagcgcctggactaccggctc
agctggcacctgtggggcgtcctgcaggcgctgcactacagccacctgagcgcctcgcgg
cagggactcctgcacgccagctacgccgcgcagctggagagcgccgggctgtggcacatg
gccgtgttcatcctgctgcacatccccgaccacattcagcgggagcgggcggtgagggcc
atgttgaccctgcactgctgcctgcaggagacgcccgagtcgctgcgcagggagcgcttc
ctgacggagaagctgctgatcccagatcagtggctccacgaggcgaaggccacccgagcg
cgccgcgacggcgaccgccaacaggaggcgctgcacctgtaccgggccgggtcctggacc
cagtgccaccggctgctcatccggcacctggcctcagattgcatcatcaatgacaatcac
gactacctgctggagttcctggagggtctggcggtccctgaacacagcgccaccatccag
gactgggacacggcgggtcgcgtctacctggactacatccgggtcgtcaacacgctgcag
gacatccagcaggtggaggcggccggctttgagttggagcgtctctacggcgacgtcacg
tctctgtgcagcagaatcgagctgctgccctgcagctccgccagagaccgcctcgcccaa
tcagagatggcgaagcgtgtggccaacatcctgcgggtggtgctgagcctgcagcagggc
gacgccccccccgacccgctggctggggggctgggccggctggcgctgcacatcggccgg
ctgccgatgccggaggactacacgctggaggagctgcgcgggctcacgcagtcctacctg
cggcagcacgtcctcagccaatga
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