Gasterosteus aculeatus (three-spined stickleback): 120822471
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Entry
120822471 CDS
T07457
Symbol
nfrkb
Name
(RefSeq) nuclear factor related to kappa-B-binding protein
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120822471 (nfrkb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gat03036
]
120822471 (nfrkb)
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
120822471 (nfrkb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
NEAT
Motif
Other DBs
NCBI-GeneID:
120822471
NCBI-ProteinID:
XP_040038126
UniProt:
G3QBR0
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All DBs
Position
VII:complement(24656908..24664864)
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AA seq
1275 aa
AA seq
DB search
MDALTQMLTDPLDPKEETDGAITEECMLGNCRLDLPEDLLEDPDIFFSVMSGSTWSEVLS
DSQRQHLRQFLPQFPDNNVAEQDSTIGDLFHNRNFNFGNPLHLAQKQFRDGYFNPEVVKY
RQLCAKSQRKRQLYSLQQYYHRLLKHILVSRKELLEFAVHSGLDFPSKRKLPAKTHAEMR
EPRVRRRLSRILKEVKTECGDSDASSDDDDTSLWAPAPQSPSSPTPAVSLRVLPSLSTQD
MKTTEGIELGERDLKSMLHNHREKRKRQPDHPDLMTSDIHLGDVLSRANIGRKGAVALFD
LSLPKKKIKDERRKKKMRTIKVESEDPCEILAPSDAPSAPTAGIINSLPDTPSTPLANIK
EEIVEECQSSPAALEEIAISFFSLLESILRAESFTSTSLLEDKVQMWQFSPASSLNVWFS
SVPCWSDLVLQALQFLAGETKDGMMALPSGFSPFVEFSDESQQWSWIGPTQDTEKDLSAL
CQLWLDSKDLVIKTEHEDMLEMTSPTPRVSTDYVVRPSTGDERQVFQIQEQQRYNQPHKA
FTFRMHGFESVVGPVKGVFDKEMSLNKAREHTLLRSDRPPYVTILSLVRDAAARLPNGEG
TRAEICELLKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRSRS
QEEFERIHQAQAAAAKARKALQQKPKPASKPKSGSKDGGGKTPGCLEAGQDVISNPMSPT
PTTPTQNTPGTPKSPLPCTASTPTKTGAPDTIKTSTGVLLVPPPLLPQLGSILPASQACP
PVSQPVTSQHAARLVSHLAAGSLPQVRVVSAQPGLVSSAGSHQAALVHQTSHQIRMPMAM
AAKGISQAVVSVPLRSPSACSPVHVPNTLSVSAVAKPQAGSPGGNNNPSAPAMLQGIAGP
SIKQVSITGQLGMKTAGGGGIPITATNLRIQGKDVLRLPPSSITTDAKGQTVLRITPDMM
ATLAKSPVATVKLTPDFLGAAGAGKSISATLHVTPPHSSASCGPGAVASCTGEAKTTKAG
PVGPSLLKAAGDAAIRLMPTLAVTVADQKSRPFSSVSSGDKSGATIRIMPGLGVIPQKQG
QTITMTTTTGSKTLTASTCANVMTMAASVVAGAKGITVAPGVSCSPLTLGTATATVRQVP
ATVVTTQPGKLPARITVPISVLNQPLKTKSVVTTPMVKGSLNTNLSSLGRNIILTTMPAG
TKLIAGNKPVSFVTAQQFQQLQQQGQATQVRIQTVQAQQLQQHMASGSPKSVSTVVVTTA
PSPKRAPDPPAAPQQ
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atggatgccctgacccaaatgctcactgaccctctggatccaaaagaagaaaccgacggc
gcaatcacagaggaatgcatgctgggcaactgcaggttagaccttccagaggacctgctt
gaagaccctgacatcttcttctctgtgatgagtgggagcacctggagtgaagtgctttcg
gattctcagaggcagcaccttcgtcagtttttgcctcagtttcccgacaacaacgtcgcg
gagcaggacagcaccatcggtgaccttttccacaacaggaacttcaactttggaaatccc
cttcatctcgcacagaagcaattcagagatggttacttcaatccggaggtggtcaagtac
agacagctgtgtgccaagtcccagaggaagagacagctgtactcccttcagcagtattac
caccggcttttgaagcacattctcgtctccagaaaggagctgctggagttcgccgttcac
agtggtctggactttccatccaaaaggaagttaccggccaagactcacgctgaaatgcgg
gagccgagggtgagaagaagattgagccgcatattgaaggaggtcaaaaccgagtgtgga
gacagcgatgcttcgtctgacgatgacgacacttcattatgggctccagctccccaatcg
ccttcgtctccgacgcccgctgtctcgctccgagttctgcccagcctctccacccaagac
atgaagactactgaaggaatagaactaggggaacgggatttgaaatccatgctgcataac
catcgggagaagaggaagcgacagccagatcacccggacttgatgacctctgacatccac
cttggagacgtactttctagagcgaatattggtcggaagggtgctgtggcattgtttgac
ctgtctctgccgaagaagaagatcaaagacgagaggaggaagaagaaaatgaggacgata
aaagtggaatccgaggatccctgtgaaattctcgcaccctcagacgccccttcagctcca
acggccggcatcatcaactcgctgccagacaccccgtctactccactggccaacatcaag
gaggaaatcgtggaggagtgtcagagcagcccggcggccctcgaggagatagccatcagt
ttcttcagcttgttggagagcatcttaagggcagaaagcttcaccagcacttcattgttg
gaggataaagttcagatgtggcagttctctcctgcgagctccctcaacgtgtggttttca
tccgtcccatgttggtctgacttggttcttcaagccctgcagtttcttgcaggagagacc
aaagatggtatgatggcgctccccagcggattttctccttttgtggaattttctgatgaa
tctcagcagtggagttggatcggacccactcaggatacagagaaggatctcagtgccctg
tgtcagttgtggctggactccaaggacttagtcataaagacggaacacgaggacatgctc
gagatgacgtcccccacacccagagtctcaactgattatgtggtgcggcccagcaccgga
gacgagagacaagtctttcaaatccaggagcagcagcgatacaaccagccacacaaagcc
ttcaccttcaggatgcacggctttgagtcggtggtggggccggtcaaaggcgtgtttgat
aaggagatgtccctgaacaaagccagggagcacacgctgctccgttcagaccgaccgcca
tacgtcaccattctctccctggtgcgggatgcggcggcgcggctacccaacggggaagga
accagggccgagatctgcgagctgttgaaagactcccagttcctcgctccagatgtcacc
agtgcacaggtgaacacggtggtcagcggagccctggatagacttcactatgagaaggac
ccctgcgtgaagtacgacatcggccgcaagctttggatttacctgcaccgcagtcgcagt
caagaggagttcgagaggatccaccaggctcaagctgctgctgcaaaagccagaaaagcc
ctgcagcaaaagcccaaacccgcatccaagcctaaatccggaagcaaggacggaggcggc
aaaaccccaggatgcctggaggcgggacaggatgtgatctccaatcccatgtcgccaacc
cctacaacacccacccaaaacacacccggaaccccaaagtcacccttaccatgcaccgcc
tccacgccgacaaagaccggcgcccccgatacaatcaaaaccagcacaggcgttcttctc
gtgcccccccccttgttgccccagctgggaagcatcctgcccgccagccaggcgtgtccg
ccggtgtcccagccggtcacgtcccaacacgcggcccgcctagtgagccacctggcggcc
ggctccctcccccaggtccgggtcgtctccgctcagccgggtctggtttcgtcggcaggg
agtcaccaggccgctctggtgcatcagacctctcaccagatcaggatgccgatggcgatg
gcggccaagggcatttcacaggcggtggtttctgtgcctctgaggagtccgtctgcctgc
agtccggtccacgtgccaaacaccctgtccgtgtccgccgtggccaaacctcaagccgga
tcgcccggcggcaacaacaacccttccgcccctgcaatgctgcaaggaatcgccggcccg
agcatcaagcaggtgtccatcacaggccagttgggaatgaagaccgctggcggcggagga
attccaataacggccacaaatctgcgcatccagggcaaagacgttctccgtctgccgccg
tcttccatcaccacggacgccaaaggacagacggtgctgcggatcaccccggacatgatg
gccactctcgccaaatcccccgtcgcgaccgtcaagctcacgcccgacttcctgggcgcc
gccggcgccggcaagagcatatcggccactctccacgtgacgccgccccactcctcagct
tcctgcggccccggcgcggtcgcgtcctgcacgggggaagccaagaccaccaaggcgggc
ccggtcggtcccagcctgctgaaggcggcgggagacgccgccatacgactgatgcccacg
ctggcggtgaccgtggccgaccaaaagtcccggcccttctccagcgtgtcctccggcgac
aagagcggcgccaccatacggataatgccggggctcggcgtcattccgcagaaacaaggg
cagaccatcaccatgacgaccaccaccggcagtaagaccctcacggcgtccacgtgcgcc
aacgtgatgaccatggcggccagcgttgtggccggtgccaaggggatcacggtggcgccc
ggagtgtcgtgctcccctctgacgctggggaccgccacggccaccgtgcggcaggttccc
gccaccgtggtcaccactcaacccgggaagttacctgcgaggatcactgtgcccatttca
gtcctgaaccaaccactgaagactaagagtgttgtgaccacaccgatggtgaaaggaagc
ctgaacactaacctcagcagtctgggcaggaacatcatcctgaccaccatgcccgccggg
acgaagctcatcgcaggaaacaaaccggtcagcttcgtaacagcacagcagttccagcag
cttcagcagcagggacaggccacgcaggtccgcatccagacggtgcaggcgcagcagctc
cagcagcacatggcgtctggctccccgaaatcggtgtccacggtcgtggtgacaacggcg
ccgtcgcccaagcgcgcccccgacccccccgctgcacctcaacagtga
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